mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 35 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4542690 | 109 (0.570) | 3 (0.020) | 3/280 | NT | 2.3% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 155 (0.870) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4417460 | 205 (1.080) | 4 (0.020) | 4/284 | NT | 2.0% | coding (509/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | = 4417479 | 194 (1.070) | coding (528/750 nt) | yjfP | acyl CoA esterase | |||||
| * | ? | NC_000913 | 4404330 = | 167 (0.880) | 4 (0.020) | 4/292 | NT | 2.5% | intergenic (+26/‑56) | hflC/yjeT | HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein |
| ? | NC_000913 | 4404365 = | 150 (0.810) | intergenic (+61/‑21) | hflC/yjeT | HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein | |||||
| * | ? | NC_000913 | 3948426 = | 238 (1.250) | 9 (0.050) | 8/280 | NT | 3.9% | intergenic (+2/+23) | yifE/yifB | UPF0438 family protein/magnesium chelatase family protein and putative transcriptional regulator |
| ? | NC_000913 | 3948449 = | 221 (1.240) | coding (1521/1521 nt) | yifB | magnesium chelatase family protein and putative transcriptional regulator | |||||
| * | ? | NC_000913 | = 3870040 | 184 (0.970) | 3 (0.020) | 3/286 | NT | 1.6% | coding (664/1065 nt) | cbrA | colicin M resistance protein; FAD‑binding protein, putative oxidoreductase |
| ? | NC_000913 | = 3870083 | 203 (1.110) | coding (707/1065 nt) | cbrA | colicin M resistance protein; FAD‑binding protein, putative oxidoreductase | |||||
| * | ? | NC_000913 | = 3838216 | 533 (2.800) | 4 (0.020) | 4/282 | NT | 0.76% | intergenic (+79/‑32) | setC/yicL | putative arabinose efflux transporter/EamA family inner membrane putative transporter |
| ? | NC_000913 | = 3838231 | 543 (3.020) | intergenic (+94/‑17) | setC/yicL | putative arabinose efflux transporter/EamA family inner membrane putative transporter | |||||
| * | ? | NC_000913 | 3819511 = | 716 (3.770) | 14 (0.080) | 9/280 | NT | 2.1% | coding (1660/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent |
| ? | NC_000913 | 3819537 = | 646 (3.620) | coding (1634/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent | |||||
| * | ? | NC_000913 | 3814121 = | 768 (4.040) | 5 (0.030) | 5/286 | NT | 0.67% | coding (190/456 nt) | dut | deoxyuridinetriphosphatase |
| ? | NC_000913 | 3814140 = | 738 (4.050) | coding (209/456 nt) | dut | deoxyuridinetriphosphatase | |||||
| * | ? | NC_000913 | = 3795026 | 673 (3.540) | 9 (0.050) | 8/282 | NT | 1.4% | coding (98/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_000913 | = 3795059 | 665 (3.700) | coding (131/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II | |||||
| * | ? | NC_000913 | 3749433 = | 572 (3.010) | 14 (0.080) | 9/290 | NT | 2.4% | coding (202/861 nt) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase |
| ? | NC_000913 | 3749475 = | 576 (3.110) | coding (244/861 nt) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase | |||||