mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 51 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4558302 = | 101 (0.870) | 3 (0.030) | 3/236 | NT | 3.4% | intergenic (‑13/+52) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | NC_000913 | 4558349 = | 80 (0.760) | intergenic (‑60/+5) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4384427 = | 129 (1.110) | 3 (0.030) | 3/252 | NT | 2.5% | coding (589/1503 nt) | yjeM | putative transporter |
| ? | NC_000913 | 4384467 = | 112 (0.990) | coding (629/1503 nt) | yjeM | putative transporter | |||||
| * | ? | NC_000913 | 4295801 = | NA (NA) | 5 (0.050) +GTGTGAAT |
9/244 | NT | 4.8% | intergenic (+7/+635) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| ? | NC_000913 | 4296061 = | 106 (0.910) | noncoding (227/600 nt) | RIP321 (repetitive extragenic palindromic) element; contains 11 REP sequences and 4 IHF sites | RIP321 (repetitive extragenic palindromic) element; contains 11 REP sequences and 4 IHF sites | |||||
| * | ? | NC_000913 | = 4294530 | 102 (0.870) | 4 (0.040) | 4/244 | NT | 3.8% | coding (50/1314 nt) | gltP | glutamate/aspartate:proton symporter |
| ? | NC_000913 | = 4294562 | 105 (0.960) | coding (82/1314 nt) | gltP | glutamate/aspartate:proton symporter | |||||
| * | ? | NC_000913 | = 4254356 | 123 (1.050) | 4 (0.040) | 4/252 | NT | 3.4% | coding (2111/2424 nt) | plsB | glycerol‑3‑phosphate O‑acyltransferase |
| ? | NC_000913 | = 4254384 | 108 (0.960) | coding (2083/2424 nt) | plsB | glycerol‑3‑phosphate O‑acyltransferase | |||||
| * | ? | NC_000913 | = 3901949 | 92 (0.790) | 3 (0.030) | 3/244 | NT | 3.0% | coding (272/1617 nt) | bglH | carbohydrate‑specific outer membrane porin, cryptic |
| ? | NC_000913 | = 3901970 | 110 (1.010) | coding (251/1617 nt) | bglH | carbohydrate‑specific outer membrane porin, cryptic | |||||
| * | ? | NC_000913 | 3828059 = | 450 (3.860) | 3 (0.030) | 3/248 | NT | 0.70% | coding (607/1206 nt) | gltS | glutamate transporter |
| ? | NC_000913 | 3828102 = | 416 (3.740) | coding (564/1206 nt) | gltS | glutamate transporter | |||||
| * | ? | NC_000913 | 3824678 = | 496 (4.250) | 3 (0.030) | 3/250 | NT | 0.62% | coding (164/690 nt) | trmH | tRNA mG18‑2'‑O‑methyltransferase, SAM‑dependent |
| ? | NC_000913 | 3824709 = | 479 (4.270) | coding (195/690 nt) | trmH | tRNA mG18‑2'‑O‑methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 3817582 | 571 (4.890) | 9 (0.080) | 7/242 | NT | 1.6% | intergenic (+43/‑178) | yicC/dinD | UPF0701 family protein/DNA damage‑inducible protein |
| ? | NC_000913 | = 3817594 | 577 (5.320) | intergenic (+55/‑166) | yicC/dinD | UPF0701 family protein/DNA damage‑inducible protein | |||||
| * | ? | NC_000913 | 3816729 = | 550 (4.710) | 8 (0.070) | 5/246 | NT | 1.6% | coding (54/864 nt) | yicC | UPF0701 family protein |
| ? | NC_000913 | 3816753 = | 483 (4.380) | coding (78/864 nt) | yicC | UPF0701 family protein | |||||