mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 630 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 73 (0.950) | 4 (0.060) | 4/168 | NT | 5.6% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 66 (0.910) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4636330 | 66 (0.860) | 6 (0.080) | 5/164 | NT | 9.3% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 56 (0.790) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | = 4633254 | NA (NA) | 3 (0.040) | 3/168 | NT | 3.2% | coding (492/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | = 4633303 | 91 (1.260) | coding (443/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | 4621160 = | 55 (0.720) | 3 (0.040) | 3/162 | NT | 5.8% | coding (278/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase |
| ? | NC_000913 | 4621189 = | 47 (0.670) | coding (307/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase | |||||
| * | ? | NC_000913 | 4614463 = | 106 (1.380) | 4 (0.060) | 3/164 | NT | 4.4% | noncoding (207/388 nt) | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences |
| ? | NC_000913 | 4614594 = | 78 (1.100) | noncoding (338/388 nt) | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences | |||||
| * | ? | NC_000913 | = 4606093 | 96 (1.250) | 8 (0.110) | 8/168 | NT | 8.1% | noncoding (73/87 nt) | leuV | tRNA‑Leu |
| ? | NC_000913 | = 4606101 | 92 (1.270) | noncoding (65/87 nt) | leuV | tRNA‑Leu | |||||
| * | ? | NC_000913 | = 4605254 | 79 (1.030) | 3 (0.040) | 3/168 | NT | 4.0% | coding (410/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport |
| ? | NC_000913 | = 4605268 | 71 (0.980) | coding (396/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport | |||||
| * | ? | NC_000913 | 4597603 = | 69 (0.900) | 4 (0.060) | 3/162 | NT | 6.1% | coding (1839/2292 nt) | opgB | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble) |
| ? | NC_000913 | 4597636 = | 60 (0.860) | coding (1806/2292 nt) | opgB | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble) | |||||
| * | ? | NC_000913 | = 4588766 | 83 (1.080) | 4 (0.060) | 4/166 | NT | 5.0% | coding (100/957 nt) | yjiA | metal‑binding GTPase |
| ? | NC_000913 | = 4588775 | 75 (1.050) | coding (91/957 nt) | yjiA | metal‑binding GTPase | |||||
| * | ? | NC_000913 | 4583004 = | 88 (1.150) | 3 (0.040) | 3/168 | NT | 3.8% | coding (45/1590 nt) | hsdM | DNA methyltransferase M |
| ? | NC_000913 | 4583031 = | 69 (0.950) | coding (18/1590 nt) | hsdM | DNA methyltransferase M | |||||