Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,242,942 Δ66 bp coding (510‑575/891 nt) malG ← maltose transporter subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4242942 4243007 66 64 [0] [1] 65 malG maltose transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42429410 (0.000)61 (1.020) 52/184 0.1 99.2% coding (576/891 nt) malG maltose transporter subunit
?NC_000913 4243008 = 1 (0.020)coding (509/891 nt) malG maltose transporter subunit

GGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4242839‑4242941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAC  >  NC_000913/4243008‑4243105
                                                                                                                                                                                                         
GGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGC                                                                                                       <  1:1202411/100‑1
GGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGC                                                                                                       <  1:622666/100‑1
    GCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAA                                                                                                   >  2:90161/1‑100
    GCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAA                                                                                                   <  2:1389476/100‑1
     CGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAAT                                                                                                  >  1:99707/1‑100
     CGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACAATCCAGCGCA                                                                                                    >  1:1460333/1‑98
      GATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATC                                                                                                 >  1:1555060/1‑100
       ATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCC                                                                                                <  1:600606/100‑1
          AACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCAC                                                                                             >  2:1163672/1‑100
          AACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCAC                                                                                             >  2:273980/1‑100
           ACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACC                                                                                            <  1:1163677/100‑1
           ACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACC                                                                                            >  2:171250/1‑100
            CGACAGGATGAATACCACCGCCAGACTCGGTACTGACAGCGGCAACAGGACACGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACC                                                                                            >  2:119939/1‑99
              ACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAG                                                                                         <  1:73058/100‑1
               CAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGA                                                                                        >  1:424944/1‑100
                  GATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATAC                                                                                     <  1:1082072/100‑1
                    TGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGC                                                                                   >  1:905350/1‑100
                    TGAATACCACCGCCAGAATCGGTACTGACAGCGGAAACAGGAAAAGGCGGCAGGACTGCCACGCTGTCACACCATCCAGCGCAATCCCCCCCAGATACGC                                                                                   <  2:130394/100‑1
                     GAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACG                                                                                    >  2:620063/1‑98
                      AATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGA                                                                                 >  1:1244720/1‑100
                         ACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAA                                                                              <  1:344387/100‑1
                              CGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACG                                                                         <  1:840092/100‑1
                              CGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACG                                                                         >  1:586084/1‑100
                              CGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACG                                                                         >  1:197760/1‑100
                                CCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCC                                                                       >  2:1350726/1‑100
                                 CAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCG                                                                      >  1:1416593/1‑100
                                  AGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGC                                                                     >  1:546834/1‑100
                                            CTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCAAGCGCAATCCCACCCAGAAACGCGAAAATTACGCCG                                                                      >  2:1491488/1‑89
                                             TGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTC                                                          <  2:1327963/100‑1
                                             TGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTC                                                          >  1:266688/1‑100
                                              GACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGCAAATTACGCCGCCGTGACTATACA                                                         >  2:555037/1‑100
                                               ACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAG                                                        <  1:657615/100‑1
                                                          AGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATG                                             <  2:1499378/100‑1
                                                           GGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGG                                            >  1:13067/1‑100
                                                           GGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGG                                            >  1:579978/1‑100
                                                           GGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGG                                            <  2:368531/100‑1
                                                              CAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAAT                                         >  2:273591/1‑100
                                                              CAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAAT                                         <  1:119939/100‑1
                                                               AAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATG                                        <  1:810885/100‑1
                                                                AGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGT                                       <  2:1379169/100‑1
                                                                    GGAAGGCCTGCCGCGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACT                                    <  2:574431/99‑1
                                                                    GGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTC                                   <  2:13067/100‑1
                                                                     GAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCA                                  <  1:171250/100‑1
                                                                       AGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACC                                <  1:105284/100‑1
                                                                        GGCCTGCCACGGTGTCGCACCATCCAGCGCAGTCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCATGCCAATGAATGGAATGTACTCACCC                               <  2:758787/100‑1
                                                                         GCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCA                              >  1:312824/1‑100
                                                                         GCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCA                              >  1:1337574/1‑100
                                                                         GCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCA                              >  2:56820/1‑100
                                                                              CCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGCACATTACGCCGCCCTGAGTACTCACGCCAATGAAAGGAATGTACTCACCCAGACG                          >  2:697606/1‑99
                                                                                ACGGTGTCGCAGCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGCATGGAATGTACTCACCCAGACGATC                       <  2:457252/100‑1
                                                                                ACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATC                       <  2:546833/100‑1
                                                                                 CGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCA                      <  1:338047/100‑1
                                                                                 CGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCA                      <  2:1323036/100‑1
                                                                                  GGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAA                     <  2:757107/100‑1
                                                                                    TGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAAC                   <  1:821802/100‑1
                                                                                       CGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAAC                <  2:834538/100‑1
                                                                                        GCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATGCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAAC                >  1:545687/1‑99
                                                                                        GCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTCACTCCTCAGCCCAATGACTGGAATGTACTCACCCAGACGATCAAAC                   >  2:623147/1‑96
                                                                                         CACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCTCCGTTAGTATTCAAGCCAATTAATGGAATGTACTCACCCAGACGATCAAACAAC                >  2:231852/1‑98
                                                                                           CCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCAT            <  2:424943/100‑1
                                                                                             ATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAC          <  2:586082/100‑1
                                                                                             ATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAC          <  2:197760/100‑1
                                                                                              TCCAGCGCCATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACA         <  2:1384622/100‑1
                                                                                               CCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAA        >  1:28772/1‑100
                                                                                                     CAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAC  <  1:477839/100‑1
                                                                                                     CAATCCCACCCAGATACGAGAAAATTACGCCGCCGTGAGTATTCAGGCCAAAGAATGGAATATACGCACCCAGACGATCAAACAACGGATACAACGCGAC  >  2:312220/1‑100
                                                                                                                                                                                                         
GGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4242839‑4242941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAC  >  NC_000913/4243008‑4243105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.