| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,242,942 | Δ66 bp | coding (510‑575/891 nt) | malG ← | maltose transporter subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4242942 | 4243007 | 66 | 64 [0] | [1] 65 | malG | maltose transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4242941 | 0 (0.000) | 61 (1.020) | 52/184 | 0.1 | 99.2% | coding (576/891 nt) | malG | maltose transporter subunit |
| ? | NC_000913 | 4243008 = | 1 (0.020) | coding (509/891 nt) | malG | maltose transporter subunit | |||||
GCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCC > NC_000913/4242843‑4243039 | gCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAa > 2:90161‑M1/1‑99 (MQ=255)gCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAa < 2:1389476‑M1/100‑2 (MQ=255) cGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAat > 1:99707‑M1/1‑98 (MQ=255) cGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACAATCCAGCGCA > 1:1460333‑M1/1‑98 (MQ=255) gATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatc > 1:1555060‑M1/1‑97 (MQ=255) aTAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcc < 1:600606‑M1/100‑5 (MQ=255) aaCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccac > 2:273980‑M1/1‑93 (MQ=255) aaCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccac > 2:1163672‑M1/1‑93 (MQ=255) aCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc < 1:1163677‑M1/100‑9 (MQ=255) aCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc > 2:171250‑M1/1‑92 (MQ=255) cGACAGGATGAATACCACCGCCAGACTCGGTACTGACAGCGGCAACAGGACACGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc > 2:119939‑M1/1‑91 (MQ=255) aCAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccag < 1:73058‑M1/100‑12 (MQ=255) cAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccaga > 1:424944‑M1/1‑88 (MQ=255) gATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatac < 1:1082072‑M1/100‑16 (MQ=255) tGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgc > 1:905350‑M1/1‑83 (MQ=255) tGAATACCACCGCCAGAATCGGTACTGACAGCGGAAACAGGAAAAGGCGGCAGGACTGCCACGCTGTCACACCATCCAGCGCAatcccccccagatacgc < 2:130394‑M1/100‑18 (MQ=255) gAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacg > 2:620063‑M1/1‑82 (MQ=255) aaTACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcga > 1:1244720‑M1/1‑81 (MQ=255) accaccGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaa < 1:344387‑M1/100‑23 (MQ=255) cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg > 1:197760‑M1/1‑73 (MQ=255) cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg < 1:840092‑M1/100‑28 (MQ=255) cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg > 1:586084‑M1/1‑73 (MQ=255) ccAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgcc > 2:1350726‑M1/1‑71 (MQ=255) cAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccg > 1:1416593‑M1/1‑70 (MQ=255) aGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgc > 1:546834‑M1/1‑69 (MQ=255) cTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCAAGCGCAatcccacccagaaacgcgaaaattacgccg > 2:1491488‑M1/1‑59 (MQ=255) tGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattc > 1:266688‑M1/1‑58 (MQ=255) tGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattc < 2:1327963‑M1/100‑43 (MQ=255) gACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgcaaattacgccgccgtgactataca > 2:555037‑M1/1‑57 (MQ=255) aCAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcag < 1:657615‑M1/100‑45 (MQ=255) aGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatg < 2:1499378‑M1/100‑56 (MQ=255) ggACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgg > 1:579978‑M1/1‑44 (MQ=255) ggACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgg < 2:368531‑M1/100‑57 (MQ=255) ggACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgg > 1:13067‑M1/1‑44 (MQ=255) cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat < 1:119939‑M1/100‑60 (MQ=255) cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat > 2:273591‑M1/1‑41 (MQ=255) aaGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatg < 1:810885‑M1/100‑61 (MQ=255) aGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgt < 2:1379169‑M1/100‑62 (MQ=255) ggAAGGCCTGCCGCGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtact < 2:574431‑M1/99‑65 (MQ=255) ggAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactc < 2:13067‑M1/100‑66 (MQ=255) gAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactca < 1:171250‑M1/100‑67 (MQ=255) aGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacc < 1:105284‑M1/100‑69 (MQ=255) ggCCTGCCACGGTGTCGCACCATCCAGCGCAgtcccacccagatacgcgaaaattacgccgccgtgagtattcatgccaatgaatggaatgtactcaccc < 2:758787‑M1/100‑70 (MQ=255) gCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccca > 1:312824‑M1/1‑30 (MQ=255) gCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccca > 1:1337574‑M1/1‑30 (MQ=255) gCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccca > 2:56820‑M1/1‑30 (MQ=255) ccACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgcacattacgccgccctgagtactcacgccaatgaaaggaatgtactcacccagacg > 2:697606‑M1/1‑25 (MQ=255) aCGGTGTCGCAGCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgcatggaatgtactcacccagacgatc < 2:457252‑M1/100‑78 (MQ=255) aCGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatc < 2:546833‑M1/100‑78 (MQ=255) cGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatca < 1:338047‑M1/100‑79 (MQ=255) cGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatca < 2:1323036‑M1/100‑79 (MQ=255) ggTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaa < 2:757107‑M1/100‑80 (MQ=255) tgtCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaac < 1:821802‑M1/100‑82 (MQ=255) cGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaac < 2:834538‑M1/100‑85 (MQ=255) gCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtatgcaggccaatgaatggaatgtactcacccagacgatcaaacaac > 1:545687‑M1/1‑15 (MQ=255) gCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtcactcctcagcccaatgactggaatgtactcacccagacgatcaaac > 2:623147‑M1/1‑15 (MQ=255) cACCATCCAGCGCAatcccacccagatacgcgaaaattacgcctccgttagtattcaagccaattaatggaatgtactcacccagacgatcaaacaac > 2:231852‑M1/1‑14 (MQ=255) ccATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcat < 2:424943‑M1/100‑89 (MQ=255) aTCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatac < 2:586082‑M1/100‑91 (MQ=255) aTCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatac < 2:197760‑M1/100‑91 (MQ=255) tCCAGCGCCatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcataca < 2:1384622‑M1/100‑92 (MQ=255) ccAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaa > 1:28772‑M1/1‑8 (MQ=255) cAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacgcgac < 1:477839‑M1/100‑99 (MQ=255) cAatcccacccagatacgagaaaattacgccgccgtgagtattcaggccaaagaatggaatatacgcacccagacgatcaaacaacggatacaacgcgac > 2:312220‑M1/1‑2 (MQ=255) | GCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCC > NC_000913/4242843‑4243039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |