| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,242,942 | Δ66 bp | coding (510‑575/891 nt) | malG ← | maltose transporter subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4242942 | 4243007 | 66 | 64 [0] | [1] 65 | malG | maltose transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4242941 | 0 (0.000) | 61 (1.020) | 52/184 | 0.1 | 99.2% | coding (576/891 nt) | malG | maltose transporter subunit |
| ? | NC_000913 | 4243008 = | 1 (0.020) | coding (509/891 nt) | malG | maltose transporter subunit | |||||
AAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCA > NC_000913/4242909‑4243107 | gcgataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaa > 2:90161‑M2/100‑100 (MQ=255)gcgataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaa < 2:1389476‑M2/1‑1 (MQ=255) cgataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaAt > 1:99707‑M2/99‑100 (MQ=255) gataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATc > 1:1555060‑M2/98‑100 (MQ=255) ataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcc < 1:600606‑M2/4‑1 (MQ=255) aacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccac > 2:273980‑M2/94‑100 (MQ=255) aacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccac > 2:1163672‑M2/94‑100 (MQ=255) acgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccacc < 1:1163677‑M2/8‑1 (MQ=255) acgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccacc > 2:171250‑M2/93‑100 (MQ=255) cgacaggatgaataccaccgccagactcggtactgacagcggcaacaggacacggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccacc > 2:119939‑M2/92‑99 (MQ=255) acaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAg < 1:73058‑M2/11‑1 (MQ=255) caggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGa > 1:424944‑M2/89‑100 (MQ=255) gatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAc < 1:1082072‑M2/15‑1 (MQ=255) tgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAcgc > 1:905350‑M2/84‑100 (MQ=255) tgaataccaccgccagaatcggtactgacagcggaaacaggaaaaggcggcaggactgccacgctgtcacaccatccagcgcaATCCCCCCCAGATAcgc < 2:130394‑M2/17‑1 (MQ=255) gaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAcg > 2:620063‑M2/83‑98 (MQ=255) aataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGa > 1:1244720‑M2/82‑100 (MQ=255) accaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGaaaa < 1:344387‑M2/22‑1 (MQ=255) cgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcg > 1:197760‑M2/74‑100 (MQ=255) cgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcg < 1:840092‑M2/27‑1 (MQ=255) cgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcg > 1:586084‑M2/74‑100 (MQ=255) ccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcgcc > 2:1350726‑M2/72‑100 (MQ=255) cagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcgccg > 1:1416593‑M2/71‑100 (MQ=255) agaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcgccgc > 1:546834‑M2/70‑100 (MQ=255) cttcttCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACACCGCCGtaa > 2:287145/1‑96 (MQ=255) ctgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatcaagcgcaATCCCACCCAGAAACGCGAAAATTAcgccg > 2:1491488‑M2/60‑89 (MQ=255) tgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTc > 1:266688‑M2/59‑100 (MQ=255) tgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTc < 2:1327963‑M2/42‑1 (MQ=255) gacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGCAAATTACGCCGCCGTGACTATACa > 2:555037‑M2/58‑100 (MQ=255) acagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAg < 1:657615‑M2/44‑1 (MQ=255) aggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg < 2:1499378‑M2/55‑1 (MQ=255) ggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatgg > 1:579978‑M2/45‑100 (MQ=255) ggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatgg < 2:368531‑M2/56‑1 (MQ=255) ggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatgg > 1:13067‑M2/45‑100 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat < 1:119939‑M2/59‑1 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat > 2:273591‑M2/42‑100 (MQ=255) aaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaatg < 1:810885‑M2/60‑1 (MQ=255) aggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGt < 2:1379169‑M2/61‑1 (MQ=255) ggaaggcctgccgcggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACt < 2:574431‑M2/64‑1 (MQ=255) ggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTc < 2:13067‑M2/65‑1 (MQ=255) gaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCa < 1:171250‑M2/66‑1 (MQ=255) aggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAcc < 1:105284‑M2/68‑1 (MQ=255) ggcctgccacggtgtcgcaccatccagcgcaGTCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCATGCCAATGAATGGAATGTACTCAccc < 2:758787‑M2/69‑1 (MQ=255) gcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCa > 1:312824‑M2/31‑100 (MQ=255) gcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCa > 1:1337574‑M2/31‑100 (MQ=255) gcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCa > 2:56820‑M2/31‑100 (MQ=255) ccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGCACATTACGCCGCCCTGAGTACTCACGCCAATGAAAGGAATGTACTCACCCAGACg > 2:697606‑M2/26‑99 (MQ=255) acggtgtcgcagcatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGCATGGAATGTACTCACCCAGACGATc < 2:457252‑M2/77‑1 (MQ=255) acggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATc < 2:546833‑M2/77‑1 (MQ=255) cggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCa < 1:338047‑M2/78‑1 (MQ=255) cggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCa < 2:1323036‑M2/78‑1 (MQ=255) ggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCaa < 2:757107‑M2/79‑1 (MQ=255) tgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaac < 1:821802‑M2/81‑1 (MQ=255) cgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaacaac < 2:834538‑M2/84‑1 (MQ=255) gcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATGCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaacaac > 1:545687‑M2/16‑99 (MQ=255) gcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTCACTCCTCAGCCCAATGACTGGAATGTACTCACCCAGACGATCAaac > 2:623147‑M2/16‑96 (MQ=255) caccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCTCCGTTAGTATTCAAGCCAATTAATGGAATGTACTCACCCAGACGATCAaacaac > 2:231852‑M2/15‑98 (MQ=255) ccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCAt < 2:424943‑M2/88‑1 (MQ=255) atccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAc < 2:586082‑M2/90‑1 (MQ=255) atccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAc < 2:197760‑M2/90‑1 (MQ=255) tccagcgccATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACa < 2:1384622‑M2/91‑1 (MQ=255) ccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACaa > 1:28772‑M2/9‑100 (MQ=255) caATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAc < 1:477839‑M2/98‑1 (MQ=255) caATCCCACCCAGATACGAGAAAATTACGCCGCCGTGAGTATTCAGGCCAAAGAATGGAATATACGCACCCAGACGATCAAACAACGGATACAACGCGAc > 2:312220‑M2/3‑100 (MQ=255) aTCCCACCCAGCTACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCACTGAAGGGAATGTACTCACCCAGACGATCCAACAACGCATACAACGCGACCa > 2:1002816/1‑100 (MQ=255) | AAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCA > NC_000913/4242909‑4243107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |