mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1306 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4638648 = | 116 (1.030) | 4 (0.040) | 3/166 | NT | 3.6% | coding (471/1353 nt) | creD | inner membrane protein |
| ? | NC_000913 | 4638675 = | 106 (1.010) | coding (498/1353 nt) | creD | inner membrane protein | |||||
| * | ? | NC_000913 | = 4636809 | 101 (0.890) | 5 (0.050) | 5/164 | NT | 4.7% | coding (114/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636834 | 108 (1.040) | coding (139/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4636330 | 111 (0.980) | 6 (0.060) | 5/164 | NT | 5.1% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 119 (1.150) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4630216 = | 116 (1.030) | 4 (0.040) | 4/164 | NT | 3.7% | coding (307/1668 nt) | ettA | energy‑dependent translational throttle A |
| ? | NC_000913 | 4630244 = | 103 (0.990) | coding (279/1668 nt) | ettA | energy‑dependent translational throttle A | |||||
| * | ? | NC_000913 | 4627662 = | 117 (1.040) | 14 (0.130) | 6/170 | NT | 11.6% | coding (348/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | 4627688 = | 102 (0.950) | coding (374/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
| * | ? | NC_000913 | 4621160 = | 107 (0.950) | 6 (0.060) | 3/162 | NT | 5.8% | coding (278/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase |
| ? | NC_000913 | 4621189 = | 96 (0.940) | coding (307/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase | |||||
| * | ? | NC_000913 | 4618029 = | 102 (0.900) | 6 (0.060) | 6/166 | NT | 6.2% | coding (707/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618065 = | 88 (0.840) | coding (743/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | 4615433 = | 113 (1.000) | 7 (0.070) | 6/158 | NT | 7.2% | coding (111/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | 4615467 = | 79 (0.790) | coding (77/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | = 4611021 | 125 (1.110) | 6 (0.060) | 4/162 | NT | 4.7% | intergenic (+18/‑375) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 4611031 | 129 (1.260) | intergenic (+28/‑365) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 4606703 | 103 (0.910) | 9 (0.080) | 6/168 | NT | 8.1% | coding (998/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4606716 | 108 (1.010) | coding (985/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||