mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 248 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4632161 = | 134 (1.030) | 6 (0.050) | 4/264 | NT | 4.5% | coding (1429/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | 4632202 = | 125 (1.020) | coding (1470/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | = 4607057 | 128 (0.990) | 3 (0.020) | 3/264 | NT | 2.3% | coding (644/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4607079 | 130 (1.060) | coding (622/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 4534139 | 142 (1.090) | 7 (0.060) | 4/258 | NT | 4.9% | intergenic (‑86/+291) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment |
| ? | NC_000913 | = 4534160 | 138 (1.150) | intergenic (‑107/+270) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment | |||||
| * | ? | NC_000913 | = 4522467 | 131 (1.010) | 3 (0.020) | 3/258 | NT | 2.3% | coding (1628/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | = 4522490 | 138 (1.150) | coding (1605/1968 nt) | yjhG | putative dehydratase | |||||
| * | ? | NC_000913 | 4522053 = | 135 (1.040) | 3 (0.030) | 3/256 | NT | 2.5% | intergenic (‑33/+74) | yjhF/yjhG | putative transporter/putative dehydratase |
| ? | NC_000913 | 4522097 = | 111 (0.930) | intergenic (‑77/+30) | yjhF/yjhG | putative transporter/putative dehydratase | |||||
| * | ? | NC_000913 | 4497494 = | 119 (0.920) | 3 (0.020) | 3/266 | NT | 2.6% | pseudogene (820/1266 nt) | intB | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase |
| ? | NC_000913 | 4497532 = | 109 (0.880) | pseudogene (858/1266 nt) | intB | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase | |||||
| * | ? | NC_000913 | = 4467562 | 124 (0.960) | 3 (0.020) | 3/264 | NT | 2.4% | intergenic (+78/‑63) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter |
| ? | NC_000913 | = 4467577 | 124 (1.010) | intergenic (+93/‑48) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter | |||||
| * | ? | NC_000913 | = 4389180 | 124 (0.960) | 3 (0.020) | 3/264 | NT | 2.6% | coding (191/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | NC_000913 | = 4389203 | 111 (0.900) | coding (168/3324 nt) | mscM | mechanosensitive channel protein, miniconductance | |||||
| * | ? | NC_000913 | 4369146 = | 115 (0.890) | 4 (0.030) | 4/258 | NT | 3.4% | intergenic (+6/+10) | fxsA/yjeH | suppressor of F exclusion of phage T7/putative transporter |
| ? | NC_000913 | 4369185 = | 121 (1.010) | coding (1228/1257 nt) | yjeH | putative transporter | |||||
| * | ? | NC_000913 | 4363384 = | 153 (1.180) | 4 (0.030) | 3/262 | NT | 2.8% | coding (1659/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC |
| ? | NC_000913 | 4363422 = | 130 (1.060) | coding (1621/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC | |||||