mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 167 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 598 (1.010) | 12 (0.020) | 5/264 | NT | 2.0% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 610 (1.080) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4633262 = | 771 (1.300) | 5 (0.010) | 4/264 | NT | 0.73% | coding (484/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | 4633298 = | 633 (1.120) | coding (448/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | = 4631429 | 699 (1.180) | 7 (0.010) | 4/266 | NT | 1.0% | coding (697/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4631438 | 708 (1.250) | coding (706/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | = 4583124 | 532 (0.900) | 13 (0.020) | 12/264 | NT | 2.3% | intergenic (‑76/+125) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583237 | 590 (1.050) | intergenic (‑189/+12) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4530145 | 543 (0.920) | 6 (0.010) | 3/266 | NT | 1.1% | coding (99/1314 nt) | sgcC | putative PTS system EIIC permease component |
| ? | NC_000913 | = 4530173 | 522 (0.920) | coding (71/1314 nt) | sgcC | putative PTS system EIIC permease component | |||||
| * | ? | NC_000913 | 4443452 = | 556 (0.940) | 7 (0.010) | 3/262 | NT | 1.3% | coding (1071/1734 nt) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit |
| ? | NC_000913 | 4443491 = | 502 (0.900) | coding (1110/1734 nt) | tamA | translocation and assembly module for autotransporter export, outer membrane subunit | |||||
| * | ? | NC_000913 | 4404334 = | 537 (0.910) | 5 (0.010) | 5/266 | NT | 0.99% | intergenic (+30/‑52) | hflC/yjeT | HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein |
| ? | NC_000913 | 4404361 = | 490 (0.860) | intergenic (+57/‑25) | hflC/yjeT | HflB protease modulator specific for phage lambda cII repressor/DUF2065 family protein | |||||
| * | ? | NC_000913 | = 4332957 | 660 (1.110) | 3 (0.010) | 3/266 | NT | 0.46% | coding (316/1092 nt) | basS | sensory histidine kinase in two‑component regulatory system with BasR |
| ? | NC_000913 | = 4333009 | 672 (1.190) | coding (264/1092 nt) | basS | sensory histidine kinase in two‑component regulatory system with BasR | |||||
| * | ? | NC_000913 | 4321620 = | 734 (1.240) | 8 (0.010) | 4/264 | NT | 1.2% | coding (77/453 nt) | phnG | ribophosphonate triphosphate synthase subunit |
| ? | NC_000913 | 4321659 = | 657 (1.170) | coding (38/453 nt) | phnG | ribophosphonate triphosphate synthase subunit | |||||
| * | ? | NC_000913 | = 4286343 | 748 (1.260) | 6 (0.010) | 6/268 | NT | 0.81% | coding (1029/1959 nt) | acs | acetyl‑CoA synthetase |
| ? | NC_000913 | = 4286352 | 741 (1.300) | coding (1020/1959 nt) | acs | acetyl‑CoA synthetase | |||||