mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 109 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5867402 | 57 (1.010) | 3 (0.060) | 3/246 | NT | 4.9% | coding (304/972 nt) | thyA | thymidylate synthase |
| ? | NC_002947 | = 5867438 | 62 (1.160) | coding (268/972 nt) | thyA | thymidylate synthase | |||||
| * | ? | NC_002947 | = 5846732 | 62 (1.090) | 3 (0.060) | 3/244 | NT | 4.4% | coding (100/813 nt) | mutM | formamidopyrimidine‑DNA glycosylase |
| ? | NC_002947 | = 5846766 | 71 (1.340) | coding (66/813 nt) | mutM | formamidopyrimidine‑DNA glycosylase | |||||
| * | ? | NC_002947 | = 5839704 | 53 (0.940) | 3 (0.060) | 3/248 | NT | 6.0% | intergenic (+81/+22) | yheT/sseA | putative hydrolase/3‑mercaptopyruvate sulfurtransferase |
| ? | NC_002947 | = 5839733 | 44 (0.810) | coding (848/855 nt) | sseA | 3‑mercaptopyruvate sulfurtransferase | |||||
| * | ? | NC_002947 | 5806982 = | 69 (1.220) | 3 (0.060) | 3/250 | NT | 4.9% | coding (1571/2454 nt) | mrcA | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase |
| ? | NC_002947 | 5807027 = | 49 (0.900) | coding (1616/2454 nt) | mrcA | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase | |||||
| * | ? | NC_002947 | 5690244 = | 59 (1.040) | 3 (0.060) | 3/246 | NT | 4.9% | coding (99/402 nt) | pilG | pilus biosynthesis/twitching motility protein PilG |
| ? | NC_002947 | 5690320 = | 61 (1.140) | coding (23/402 nt) | pilG | pilus biosynthesis/twitching motility protein PilG | |||||
| * | ? | NC_002947 | 5448975 = | 62 (1.090) | 3 (0.050) | 3/254 | NT | 4.8% | intergenic (‑76/‑157) | PP_4786/ybeZ | hypothetical protein/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947 | 5449021 = | 58 (1.050) | intergenic (‑122/‑111) | PP_4786/ybeZ | hypothetical protein/nucleoside triphosphate hydrolase domain‑containing protein | |||||
| * | ? | NC_002947 | = 5340395 | 64 (1.130) | 3 (0.060) | 3/250 | NT | 4.4% | coding (244/480 nt) | folK | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase |
| ? | NC_002947 | = 5340435 | 68 (1.250) | coding (284/480 nt) | folK | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase | |||||
| * | ? | NC_002947 | 5244067 = | 75 (1.320) | 3 (0.060) | 3/250 | NT | 4.1% | coding (415/1302 nt) | hmgA | homogentisate 1,2‑dioxygenase |
| ? | NC_002947 | 5244108 = | 67 (1.230) | coding (374/1302 nt) | hmgA | homogentisate 1,2‑dioxygenase | |||||
| * | ? | NC_002947 | 5091883 = | 57 (1.010) | 3 (0.060) | 3/248 | NT | 4.8% | coding (422/1221 nt) | astC | acetylornithine aminotransferase |
| ? | NC_002947 | 5091957 = | 64 (1.180) | coding (348/1221 nt) | astC | acetylornithine aminotransferase | |||||
| * | ? | NC_002947 | 4181736 = | 64 (1.130) | 3 (0.060) | 3/250 | NT | 4.8% | coding (250/324 nt) | PP_3679 | hypothetical protein |
| ? | NC_002947 | 4181784 = | 58 (1.060) | coding (202/324 nt) | PP_3679 | hypothetical protein | |||||