| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP006584 | 1,446,672 | Δ2,957 bp | [zntB]–[LY180_06850] | [zntB], LY180_06845, [LY180_06850] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP006584 | 1446672 | 1449628 | 2957 | 23 [0] | [0] 23 | [zntB]–[LY180_06850] | [zntB],LY180_06845,[LY180_06850] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | = 1446671 | 0 (0.000) | 23 (0.560) | 22/584 | 1.0 | 100% | coding (924/984 nt) | zntB | zinc transporter |
| ? | CP006584 | 1449629 = | 0 (0.000) | coding (18/936 nt) | LY180_06850 | tRNA 2‑thiocytidine biosynthesis protein TtcA | |||||
AGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP006584/1446405‑1446671‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCACGTTTTACTGCTGCAT > CP006584/1449629‑1449912 gGCGATGGCCAACGTCGGAGGATGCGGGTTATTGCGGATCGCCGTGTGCGCGGGCTGGACGAAATAGACGCCTGTATCGCACAGACGGGCGGGCTGGCGGATGAAATCGCTCAGGTGATGCAGGAAAAGTTGGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTGTTTACCCAGTACCTGTCTGACAGGGTTATTGTGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTTGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTC < 2:137917/297‑1 gcgctgggtATGAAGAATATTCCGGTTTGCCTTGGGTGTGGCTTTGACGAAATCGACGCCGGTATAGCACGGACGGGTGTGATGGCGGATGAAATCGCTCAGTTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATG < 2:10308/289‑1 CCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCCATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTAATTTTTTTGTCTTTTGTTGATTTTCTTACATTTTTTTAGCTCCTTGGTCATAAATGtg > 2:4956/1‑296 tgccgggtGCCGTGGGGGGGGTCTGAACGAAAACCACGCCTGTATGGGAGGGATTGGCGTGATGGAGGATGAAATCGCTTAGGGGATGCAGGAAAATTTTGCCCGTCGTACCTTTACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACT < 2:234026/290‑1 CGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAAC < 1:5388/298‑1 AAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCTTGTCGGCGGGTGGCACTTCGGATCTTCACTTTTTTGTATTTGGTTGATTTTCTGGCATTATTTCAGTTCTCTGTTAATAAATGGGTAAAATTGTGGGACACATTTGACCCTACGATAACAGCGCACTCAAaa > 2:91182/1‑296 GCCAGTATAGCACGGAATTGCGTGATGGCGGATGAAAGCGCTCAGGTGATGCAGGAAAATTTAGGTCGTCGTACCTATACAATGTCATTTATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATC < 2:148641/298‑1 AGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCCAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCAT > 1:16881/1‑298 AGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCAT > 1:310036/1‑298 GATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACAC < 1:233111/298‑1 GCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTGGATTTTCTTCCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCACCTACGATCACCGCGCATTCAACATGCCGATCTGTTCGTCGTTCATGTCATCAATCAACACAACATAAATTACATCCACCAc > 2:9628/1‑297 gtgAATTGTCTTTTTACCCAGTACATTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGGGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATGCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGG < 2:194086/295‑1 TTTTCCCAGTACCTTTCTGACATGGTTATTTGGCGTCAACCTTGGTGGTGTCCCTGGCGGCGGGTGGCAATTCTGTTTTTTAATTTTTGTTATTTTGTTGAGTTTCTTGCATTATTTCAGTTCTTTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGC < 2:138424/298‑1 CCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCA > 1:143527/1‑298 AGTTCCTTTCTGACAGGGTTATTTGGCGGTATGCTGGGTGGGATCTCGGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCACTCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAAC < 2:270631/298‑1 GGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAA > 1:58241/1‑298 ATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATG < 1:9628/298‑1 TGGCGGCAACCTTGGTTGGATCCCTGGTGGCGTGTGGCAATTCGGATTTTTAATTTTTTGTATTTTTTTGATTTTGTGTCATTATTTTAGGTCTCTTGGACTAAAGGGGGAAAATTGGGGGCAAACTTTGCAATTACTATAACCGCGCAGTCAACATGGCTAGCTGTTCGTCGTTCATGTCATCAATCCACATACCGTATATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCG < 2:16881/298‑1 GTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGAT > 1:211044/1‑298 TCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGC > 1:349726/1‑298 GGGTGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAGCATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCA < 1:4956/298‑1 TGGCAATTCGGATTTTCAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCA > 1:47729/1‑298 CAATTTTTTGTATTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCACGTTTTACTGCTGCAT < 1:91182/298‑1 AGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP006584/1446405‑1446671‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCACGTTTTACTGCTGCAT > CP006584/1449629‑1449912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |