Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | CP006584 | 1,446,672 | Δ2,957 bp | [zntB]–[LY180_06850] | [zntB], LY180_06845, [LY180_06850] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | CP006584 | 1446672 | 1449628 | 2957 | 23 [0] | [0] 23 | [zntB]–[LY180_06850] | [zntB],LY180_06845,[LY180_06850] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP006584 | = 1446671 | 0 (0.000) | 23 (0.560) | 22/584 | 1.0 | 100% | coding (924/984 nt) | zntB | zinc transporter |
? | CP006584 | 1449629 = | 0 (0.000) | coding (18/936 nt) | LY180_06850 | tRNA 2‑thiocytidine biosynthesis protein TtcA |
CTTTTCAAGATACTCGGGCAGAACGTGTTCCGGGAAGCCCGGTTGCTTTTGATCGAGGTTAACAGCCACCAGCGAAAAATTGATTGGCGCGCTTTGCTGCAAATTGCGCAGAATCTCCAGCATGGTATAGCTGTCTTTACCCCCGGAGAGGCAAACCATGATGCGATCGCCTTCTTCAATCATATTGAAGTCAGCAATGGCTTCGCCCACGTTACGACGCAGACGTTTTTGTAATTTGTTCAGATTGTATTGTTCTTTCTTTGTAGTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCACGTTTTACTGCTGCAT > CP006584/1449362‑1449912 | ggcgatggccaacgtcggaggatgcgggttattgcggatcgccgtgtgcgcgggctggacgaaatagacgcctgtatcgcacagacgggcgggctggcggatgaaatcgctcaggtgatgcaggaaaagttggctcgtcgtacctatacaatgtcattgatggcaatggtctgtttacccagtacctgtctgacagggttattgtgcgtcaaccttggtgggatccctggcggcgggttgcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTtctc < 2:137917‑M2/31‑1 (MQ=255) gcgctgggtatgaagaatattccggtttgccttgggtgtggctttgacgaaatcgacgccggtatagcacggacgggtgtgatggcggatgaaatcgctcagttgatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATg < 2:10308‑M2/43‑1 (MQ=255) ccgtcggatgcaggatattgccgatcgccttgggcgcggtcttgacgaaatcgacgcctgtatagcacggactggcgtgatggcggatgaaatcgctcaggtgatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggccatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttaatttttttgtcttTTGTTGATTTTCTTACATTTTTTTAGCTCCTTGGTCATAAatgtg > 2:4956‑M2/254‑296 (MQ=255) tgccgggtgccgtggggggggtctgaacgaaaaccacgcctgtatgggagggattggcgtgatggaggatgaaatcgcttaggggatgcaggaaaattttgcccgtcgtacctttacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACt < 2:234026‑M2/63‑1 (MQ=255) cgccttgggcgcggtcttgacgaaatcgacgcctgtatagcacggactggcgtgatggcggatgaaatcgctcaggtgatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAAc < 1:5388‑M2/70‑1 (MQ=255) aaatcgacgcctgtatagcacggactggcgtgatggcggatgaaatcgctcaggtgatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccttgtcggcgggtggcacttcggatcttcacttttttgtattTGGTTGATTTTCTGGCATTATTTCAGTTCTCTGTTAATAAATGGGTAAAATTGTGGGACACATTTGACCCTACGATAACAGCGCACtcaaaa > 2:91182‑M2/207‑296 (MQ=255) gccagtatagcacggaattgcgtgatggcggatgaaagcgctcaggtgatgcaggaaaatttaggtcgtcgtacctatacaatgtcatttatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATc < 2:148641‑M2/100‑1 (MQ=255) aggtgatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCCAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCAt > 1:16881‑M2/156‑298 (MQ=255) aggtgatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCAt > 1:310036‑M2/156‑298 (MQ=255) gatgcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATacac < 1:233111‑M2/147‑1 (MQ=255) gcaggaaaatttagctcgtcgtacctatacaatgtcattgatggcaatggtctttttacccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTGGATTTTCTTCCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCACCTACGATCACCGCGCATTCAACATGCCGATCTGTTCGTCGTTCATGTCATCAATCAACACAACATAAATTACAtccaccac > 2:9628‑M2/149‑297 (MQ=255) gtgaattgtctttttacccagtacatttctgacagggttatttggcgtcaaccttggtgggatccctgggggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATGCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCgg < 2:194086‑M2/192‑1 (MQ=255) ttttcccagtacctttctgacatggttatttggcgtcaaccttggtggtgtccctggcggcgggtggcaattctgttttttaatttttgttattTTGTTGAGTTTCTTGCATTATTTCAGTTCTTTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGc < 2:138424‑M2/204‑1 (MQ=255) ccagtacctttctgacagggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCa > 1:143527‑M2/90‑298 (MQ=255) agttcctttctgacagggttatttggcggtatgctgggtgggatctcgggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCACTCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAAc < 2:270631‑M2/211‑1 (MQ=255) gggttatttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCaaaa > 1:58241‑M2/73‑298 (MQ=255) atttggcgtcaaccttggtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATg < 1:9628‑M2/231‑1 (MQ=255) tggcggcaaccttggttggatccctggtggcgtgtggcaattcggatttttaattttttgtattTTTTTGATTTTGTGTCATTATTTTAGGTCTCTTGGACTAAAGGGGGAAAATTGGGGGCAAACTTTGCAATTACTATAACCGCGCAGTCAACATGGCTAGCTGTTCGTCGTTCATGTCATCAATCCACATACCGTATATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCcg < 2:16881‑M2/234‑1 (MQ=255) gtgggatccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGAt > 1:211044‑M2/51‑298 (MQ=255) tccctggcggcgggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTAcggc > 1:349726‑M2/45‑298 (MQ=255) gggtggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAGCATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCa < 1:4956‑M2/265‑1 (MQ=255) tggcaattcggattttcaattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCa > 1:47729‑M2/31‑298 (MQ=255) caattttttgtattTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCACGTTTTACTGCTGCAt < 1:91182‑M2/284‑1 (MQ=255) | CTTTTCAAGATACTCGGGCAGAACGTGTTCCGGGAAGCCCGGTTGCTTTTGATCGAGGTTAACAGCCACCAGCGAAAAATTGATTGGCGCGCTTTGCTGCAAATTGCGCAGAATCTCCAGCATGGTATAGCTGTCTTTACCCCCGGAGAGGCAAACCATGATGCGATCGCCTTCTTCAATCATATTGAAGTCAGCAATGGCTTCGCCCACGTTACGACGCAGACGTTTTTGTAATTTGTTCAGATTGTATTGTTCTTTCTTTGTAGTTTGTTGATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTTTGCAACTACGATAACCGCGCATTCAACATGGCTATCTGTTCGTCGTTCATGTCATCAATCCACATACCGTAAATTTCATACACCATCTGCGCAGTTTCATGCCCCATTTGGCTGGCTATAAATGCCGGGTTCGCTCCTGCCGTCAACAGCCAGCAGGCAAAAGTATGCCGCGTATGGTACGGATTACGGCGGCGAATACCAGCACGTTTTACTGCTGCAT > CP006584/1449362‑1449912 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |