Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | CP006584 | 1,446,672 | Δ2,957 bp | [zntB]–[LY180_06850] | [zntB], LY180_06845, [LY180_06850] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | CP006584 | 1446672 | 1449628 | 2957 | 23 [0] | [0] 23 | [zntB]–[LY180_06850] | [zntB],LY180_06845,[LY180_06850] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP006584 | = 1446671 | 0 (0.000) | 23 (0.560) | 22/584 | 1.0 | 100% | coding (924/984 nt) | zntB | zinc transporter |
? | CP006584 | 1449629 = | 0 (0.000) | coding (18/936 nt) | LY180_06850 | tRNA 2‑thiocytidine biosynthesis protein TtcA |
AGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCACCGTAGTAAATGGTTGTAACAAAAGCAATTTTTCCGGCTGTCTGTATACAAAAACGCCGCAAAGTTTGAGCGAAGTCAATAAACTCTCTACCCATTCAGGGCAATATCTCCCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTT > CP006584/1446405‑1446955 | ggcGATGGCCAACGTCGGAGGATGCGGGTTATTGCGGATCGCCGTGTGCGCGGGCTGGACGAAATAGACGCCTGTATCGCACAGACGGGCGGGCTGGCGGATGAAATCGCTCAGGTGATGCAGGAAAAGTTGGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTGTTTACCCAGTACCTGTCTGACAGGGTTATTGTGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTTGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctc < 2:137917‑M1/297‑32 (MQ=255) gcgctgggtatgaagaataTTCCGGTTTGCCTTGGGTGTGGCTTTGACGAAATCGACGCCGGTATAGCACGGACGGGTGTGATGGCGGATGAAATCGCTCAGTTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatg < 2:10308‑M1/289‑44 (MQ=255) ccGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCCATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTAATTTTTTTGTCTTttgttgattttcttacatttttttagctccttggtcataaatgtg > 2:4956‑M1/1‑253 (MQ=255) tgccgggtgccgtggggGGGGTCTGAACGAAAACCACGCCTGTATGGGAGGGATTGGCGTGATGGAGGATGAAATCGCTTAGGGGATGCAGGAAAATTTTGCCCGTCGTACCTTTACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaact < 2:234026‑M1/290‑64 (MQ=255) cGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaac < 1:5388‑M1/298‑71 (MQ=255) aaaTCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCTTGTCGGCGGGTGGCACTTCGGATCTTCACTTTTTTGTATTtggttgattttctggcattatttcagttctctgttaataaatgggtaaaattgtgggacacatttgaccctacgataacagcgcactcaaaa > 2:91182‑M1/1‑206 (MQ=255) gCCAGTATAGCACGGAATTGCGTGATGGCGGATGAAAGCGCTCAGGTGATGCAGGAAAATTTAGGTCGTCGTACCTATACAATGTCATTTATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatc < 2:148641‑M1/298‑101 (MQ=255) aGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggccaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcat > 1:16881‑M1/1‑155 (MQ=255) aGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcat > 1:310036‑M1/1‑155 (MQ=255) gATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacac < 1:233111‑M1/298‑148 (MQ=255) gCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgtggattttcttccattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcacctacgatcaccgcgcattcaacatgccgatctgttcgtcgttcatgtcatcaatcaacacaacataaattacatccaccac > 2:9628‑M1/1‑148 (MQ=255) gtgaattgTCTTTTTACCCAGTACATTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGGGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcatgcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgg < 2:194086‑M1/295‑193 (MQ=255) ttttCCCAGTACCTTTCTGACATGGTTATTTGGCGTCAACCTTGGTGGTGTCCCTGGCGGCGGGTGGCAATTCTGTTTTTTAATTTTTGTTATTttgttgagtttcttgcattatttcagttctttggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgc < 2:138424‑M1/298‑205 (MQ=255) ccAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtca > 1:143527‑M1/1‑89 (MQ=255) aGTTCCTTTCTGACAGGGTTATTTGGCGGTATGCTGGGTGGGATCTCGGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcactccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaac < 2:270631‑M1/298‑212 (MQ=255) gggTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaa > 1:58241‑M1/1‑72 (MQ=255) aTTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatg < 1:9628‑M1/298‑232 (MQ=255) tGGCGGCAACCTTGGTTGGATCCCTGGTGGCGTGTGGCAATTCGGATTTTTAATTTTTTGTATTtttttgattttgtgtcattattttaggtctcttggactaaagggggaaaattgggggcaaactttgcaattactataaccgcgcagtcaacatggctagctgttcgtcgttcatgtcatcaatccacataccgtatatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatgccg < 2:16881‑M1/298‑235 (MQ=255) gtggGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatgccgcgtatggtacggat > 1:211044‑M1/1‑50 (MQ=255) tCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatgccgcgtatggtacggattacggc > 1:349726‑M1/1‑44 (MQ=255) gggTGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcagcatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatgccgcgtatggtacggattacggcggcgaatacca < 1:4956‑M1/298‑266 (MQ=255) tGGCAATTCGGATTTTCAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatgccgcgtatggtacggattacggcggcgaataccagca > 1:47729‑M1/1‑30 (MQ=255) cAATTTTTTGTATTttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgttcatgtcatcaatccacataccgtaaatttcatacaccatctgcgcagtttcatgccccatttggctggctataaatgccgggttcgctcctgccgtcaacagccagcaggcaaaagtatgccgcgtatggtacggattacggcggcgaataccagcacgttttactgctgcat < 1:91182‑M1/298‑285 (MQ=255) | AGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGTCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCATTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACAGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCACCGTAGTAAATGGTTGTAACAAAAGCAATTTTTCCGGCTGTCTGTATACAAAAACGCCGCAAAGTTTGAGCGAAGTCAATAAACTCTCTACCCATTCAGGGCAATATCTCCCTTGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTTGATGAGTCGGCTTTTTTTTGCCTGTT > CP006584/1446405‑1446955 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |