Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A14 F35 I1 R1	74	857.2	37938082	99.4%	37710453	136.3

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGTT‑‑T‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑G‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTC  >  AE015451_phaM1/1499351‑1499637

GTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcg                                                                                                                                                         <  LH00941:114:22FVMWLT1:2:1260:41733:20952/151‑5 (MQ=60)

  TCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCTGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcggg                                                                                                                                                       <  LH00941:114:22FVMWLT1:2:2146:47336:13170/151‑7 (MQ=60)

  TCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcggg                                                                                                                                                       <  LH00941:114:22FVMWLT1:2:2155:33700:19078/151‑7 (MQ=60)

  TCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcggg                                                                                                                                                       <  LH00941:114:22FVMWLT1:2:1248:10837:4939/151‑7 (MQ=60)

  TCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCCTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcggg                                                                                                                                                       <  LH00941:114:22FVMWLT1:2:2155:33709:19062/151‑7 (MQ=60)

        ACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGTGTGTCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGTTTTGCCGGTGTT‑‑Tttgggtacgtc                                                                                                                                               >  LH00941:114:22FVMWLT1:2:2138:7240:6044/1‑140 (MQ=60)

        ACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGGGTGCCCGCGAAAAAAGAGCCACGGTGCCCGGCACCGGCTTTGCCAGTGTT‑‑TG‑C‑‑G‑‑GG‑‑‑‑CA‑C‑G‑CC                                                                                                                                   >  LH00941:114:22FVMWLT1:2:2234:23502:6348/1‑151 (MQ=60)

        ACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGAGAAAAAGGCGCCGCGGTGCATGGCAACGGCTTTGTCGGTGTTcgcgggcacgac                                                                                                                                                 >  LH00941:114:22FVMWLT1:2:2156:36418:9375/1‑139 (MQ=60)

         CGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGTCCACGAAACAGGCGCCGCGGTGCATGGTACCGGCTTTGCCGGTGTTC‑T‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑G‑CCC                                                                                                                                  >  LH00941:114:22FVMWLT1:2:2255:7666:13346/1‑151 (MQ=60)

         CGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcgggcacgccc                                                                                                                                                <  LH00941:114:22FVMWLT1:2:1118:23225:18774/151‑14 (MQ=60)

                    GTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCCTGGCACCGGATTTGCCGGTG‑T‑‑T‑‑CGAG‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGA                                                                                                                        >  LH00941:114:22FVMWLT1:2:2165:39339:15940/1‑151 (MQ=60)

                               GTTCAGAGCCTGAACGAAGCTTTGGCACCACAGAAGGACTGGGGCTGCAAAATGTGGGGA‑GCGGGCGTGCCCGCGAAAAAGGCGCCGCGGTGCATGGCACCGGCTTTGCTGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCAT                                                                                                             <  LH00941:114:22FVMWLT1:2:2158:39663:28286/151‑1 (MQ=43)

                               ATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGACCGCGAAAAAAGCGCCACGGTGTCTGGCCACGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑CAC‑CCGCTCCCACAGAATGGTTGCCAT                                                                                                             >  LH00941:114:22FVMWLT1:2:1160:41946:24235/1‑151 (MQ=60)

                                TTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGGCCGCGAAACAAGCACCGCGGTGCATGGCAACAGATTTGCCGGTGTTC‑T‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GACCACTCCCACAGAATGACTGCCAGT                                                                                                            >  LH00941:114:22FVMWLT1:2:2250:47243:24443/1‑151 (MQ=60)

                                TTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACGAGAGCCAAGGTGCATGGCACCGGCTTTGCCGGTG‑T‑‑T‑‑CGAG‑‑GG‑‑‑‑CA‑A‑GACCGCTCCCACAGACTGATTGCCATT                                                                                                            >  LH00941:114:22FVMWLT1:2:2267:4966:9215/1‑151 (MQ=60)

                                TTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTagcgggcacgcccactcccaccaactgattgccctt                                                                                                                         >  LH00941:114:22FVMWLT1:2:1257:47937:9759/1‑115 (MQ=60)

                                TTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAAAAAGAGCCGCGGTGCATGGCCCCGGGTTTGCCTGTGTTctcaggcacacccacccccacagaacgattgccatt                                                                                                                         >  LH00941:114:22FVMWLT1:2:2245:31804:9807/1‑115 (MQ=60)

                                TTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCAAAACAGGCGCCGCAGTGTATGGCCCCGGCTTTGCCGGTGTT‑‑TG‑T‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACCGACTGATTTCCATT                                                                                                            >  LH00941:114:22FVMWLT1:2:2110:27163:22361/1‑151 (MQ=60)

                                          GAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCTCAAAACAGGCACCGCGGTGTATGGCCCCGGCTTTGTCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGAATTATTGCCATTAAGCGGGTCT                                                                                                  >  LH00941:114:22FVMWLT1:2:1255:5632:24331/1‑151 (MQ=60)

                                                    TTGGCACCACAGCAGGACTGAGGCTGCCAAATGTTGTGA‑GCGGGTGTTCCCGCGAAGCAGGTGCCGTGGTACATGGCACCGGTTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑CTC‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAG                                                                                        <  LH00941:114:22FVMWLT1:2:2160:36834:22521/151‑1 (MQ=38)

                                                    TGGGCACCACAACAGGACGGAGTCTACCAAATGGTGGGA‑GTGGGCGTGCCCGCGAAACATGCGCCGCGGTGCATGGCACTGGTTTTGCTGTTGTTCGT‑‑‑‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAG                                                                                        <  LH00941:114:22FVMWLT1:2:2132:29502:5884/151‑1 (MQ=44)

                                                     aaaacccccccccccagatcgtgtatcttgtctcgtgggctcggagatgtgtataagagacaGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAG                                                                                        <  LH00941:114:22FVMWLT1:2:2257:44941:18886/89‑1 (MQ=20)

                                                     aaaaaaaaacccccccccccagatcgtgtatcttgtctcgtgggctcggagatgtgtataagagacaGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAG                                                                                        <  LH00941:114:22FVMWLT1:2:2134:30880:29118/84‑1 (MQ=8)

                                                       GCACCACAGCAGGACTGAGGCTGCCAAATGGTGGGA‑GTGGGCGTGCCTGCGAAACGGGCGCCGTGGTGCATGGCACCGGCTTTGCTGGTGTTCGT‑‑‑‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGA                                                                                     <  LH00941:114:22FVMWLT1:2:2241:2285:4635/151‑1 (MQ=60)

                                                       GCACCACAGCAGGACTGAGGCTGCCAAA‑TGTGGGAGGTGGTCGTGCCCGCAAAACAGGCACCTCGGGACAGGACACCGGCTTTGCCGGTGTT‑‑TG‑C‑‑G‑‑GA‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGA                                                                                     <  LH00941:114:22FVMWLT1:2:1154:47197:6076/151‑1 (MQ=40)

                                                        CACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGAGTGGCCGCAAAAAAAGAGCCGCGGTGCATGGCACCGGCTTTTTCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCACTCCCCCAAACTGATTGCCATTCAGCGGGCatccctctccagtgga                                                                                    >  LH00941:114:22FVMWLT1:2:1248:15986:26380/1‑135 (MQ=19)

                                                             CAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGGGTGCCCGCGAAACAAGAGCCGAGGGGCATGGCACCAGCTTTTCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑AA‑C‑GCCCGCTCCCACAGAATGGTTGCCAGTAAGTGGGCCTATCGCTGCAGTGACGGTCC                                                                               >  LH00941:114:22FVMWLT1:2:1144:34633:9391/1‑151 (MQ=40)

                                                             CAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTTCCCGCGAAACAAGCGCCGCGGTGCACGGCACCGGCTTTGCCGGT‑TT‑‑TCGC‑‑G‑‑GG‑‑‑‑CC‑C‑GCCCGCTCCCCCAAAATGATTGCCATTCAGCAGGCCTATCGCTACAATGACGGCCC                                                                               >  LH00941:114:22FVMWLT1:2:1269:50803:1945/1‑151 (MQ=60)

                                                             CAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAAAAAGCGCCACGGTGCATGGCACCAGCTTTGCCGGTGTTcgcggggacacccacccccacaaaatgattgccactcagcaggcatctctctacaacgacggccc                                                                                            >  LH00941:114:22FVMWLT1:2:2242:8636:24315/1‑86 (MQ=47)

                                                               GCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGAGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGT                                                                             >  LH00941:114:22FVMWLT1:2:2155:43240:7998/1‑151 (MQ=60)

                                                                  GGACTGAGGCTGCCAAACGGTGGGA‑GCGGGGGTGCCCGGGAAAAAGGGGCCACGGTGCATGGCACCGGATTTGCCGGTGTTctcgggaaaaaccgctcccacaaacctagtgccagtaagcggggatatctccgcaggggcggtccttttt                                                                                       >  LH00941:114:22FVMWLT1:2:2134:14248:14179/1‑81 (MQ=41)

                                                                  GGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAAAAAGCGCCGCGGTGCATGGCACCGGATTTGCCAGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑CAC‑CCACTCCCACAGAACGATTGCCATTAAGCGGGCCTATCGCTCCAGTGGCGGCCCGTTTT                                                                          >  LH00941:114:22FVMWLT1:2:2170:10143:18918/1‑151 (MQ=60)

                                                                                        GGA‑GCGGGCGTACCCGAGAAACGGGCGCCGTGGTGCATGGCACCGTTTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑CAC‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCA                                                    <  LH00941:114:22FVMWLT1:2:2167:4069:2441/151‑1 (MQ=60)

                                                                                             CGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGAC                                                >  LH00941:114:22FVMWLT1:2:2230:37499:11408/1‑151 (MQ=60)

                                                                                                   TCCCCGCGAAAAAGGCGCCGCGGTGCATGGCACCTGCTTTGCCGGTGTTCGT‑‑‑‑‑G‑‑GG‑‑‑‑CACC‑C‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTT                                          <  LH00941:114:22FVMWLT1:2:2116:41262:19271/151‑1 (MQ=60)

                                                                                                       tgcgaaacgggcgccgtggtgcagggaacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑CTC‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAA                                      <  LH00941:114:22FVMWLT1:2:2238:13240:11152/122‑1 (MQ=60)

                                                                                                       cgaaAAACAGGCGCCGCGGTGCATGGNACCGGTTTTTCTGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAA                                      <  LH00941:114:22FVMWLT1:2:2267:28864:25275/147‑1 (MQ=60)

                                                                                                       CGCGAAACAGGCGCCGTGGTGCGTGGCACTGGCTTTGCCGGTG‑T‑‑T‑‑C‑‑G‑‑GGGGCACA‑C‑‑‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAA                                      <  LH00941:114:22FVMWLT1:2:2157:12186:24539/151‑1 (MQ=60)

                                                                                                       CGCAAAACAGGCGCCGCGGTGCAGGACACCGGTTTTGCGGGTGTT‑‑TG‑C‑‑G‑‑GG‑‑‑‑CA‑T‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAA                                      <  LH00941:114:22FVMWLT1:2:2145:38378:14691/151‑1 (MQ=60)

                                                                                                           AAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCT                                  >  LH00941:114:22FVMWLT1:2:2169:41946:24587/1‑151 (MQ=60)

                                                                                                                GGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAA                             >  LH00941:114:22FVMWLT1:2:2243:21663:23626/1‑151 (MQ=60)

                                                                                                                GGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAA                             >  LH00941:114:22FVMWLT1:2:2110:50183:7982/1‑151 (MQ=60)

                                                                                                                  cgccggggggcagggcatttgtTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGC                           <  LH00941:114:22FVMWLT1:2:1136:42020:14147/129‑1 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGACTCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1265:45052:4026/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1211:20026:16981/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1211:20035:16965/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1156:18667:10303/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1255:8146:8766/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1156:11391:7982/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:1255:8156:8782/1‑151 (MQ=60)

                                                                                                                    CCGCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAG                         >  LH00941:114:22FVMWLT1:2:2221:48066:1368/1‑151 (MQ=60)

                                                                                                                     gcCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGA                        >  LH00941:114:22FVMWLT1:2:2144:48760:28926/3‑151 (MQ=60)

                                                                                                                      GCGGTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGAT                       >  LH00941:114:22FVMWLT1:2:1147:39792:27037/1‑151 (MQ=60)

                                                                                                                         cccgcgaacacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAGTCATGACTCCCTTAGACCGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2111:34596:13266/12‑151 (MQ=60)

                                                                                                                         cccgcgaacacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2212:20923:10592/12‑151 (MQ=60)

                                                                                                                         cccgcgaacacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2111:34606:13250/12‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAGTCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2218:47188:9070/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1257:29003:16773/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1101:1111:11761/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1133:27015:1384/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1133:51903:16661/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2223:47401:2521/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2223:47391:2505/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1133:51921:16661/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2240:15431:5820/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2209:39321:21993/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2258:19730:26044/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1240:11613:23898/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2252:6371:6204/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1251:28439:2057/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1260:35807:17926/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:1269:28966:21128/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2102:21737:25003/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2130:14156:14339/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2246:15912:19783/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2123:9256:16228/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2123:9247:16212/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2136:12871:1897/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2123:50119:11264/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2116:37998:16052/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2144:17909:14691/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2246:15931:19783/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2248:14720:28510/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2153:10458:3610/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTCTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGAAGATCTG                    >  LH00941:114:22FVMWLT1:2:2101:3422:3242/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGAATGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2127:7028:5291/1‑151 (MQ=60)

                                                                                                                         GTGCATGGCACCGGCTTTGCCGGTG‑T‑‑T‑‑C‑‑GCTGG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2234:31009:11536/1‑151 (MQ=60)

                                                                                                                         GCGCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTCACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTG                    >  LH00941:114:22FVMWLT1:2:2223:47410:2505/1‑151 (MQ=60)

                                                                                                                           GCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAA                  >  LH00941:114:22FVMWLT1:2:1224:33847:1208/1‑151 (MQ=60)

                                                                                                                           GCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAA                  >  LH00941:114:22FVMWLT1:2:1236:37462:24539/1‑151 (MQ=60)

                                                                                                                           GCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAA                  >  LH00941:114:22FVMWLT1:2:2214:16106:21785/1‑151 (MQ=60)

                                                                                                                           GCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAA                  >  LH00941:114:22FVMWLT1:2:2104:38572:8750/1‑151 (MQ=60)

                                                                                                                           GCATGGCACCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAA                  >  LH00941:114:22FVMWLT1:2:2125:8045:17878/1‑151 (MQ=60)

                                                                                                                            cagggcactggtTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAA                 <  LH00941:114:22FVMWLT1:2:1139:19869:16580/139‑1 (MQ=60)

                                                                                                                                gcacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTC             >  LH00941:114:22FVMWLT1:2:1101:3080:23498/5‑151 (MQ=60)

                                                                                                                                gcacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTC             >  LH00941:114:22FVMWLT1:2:2146:21949:25884/5‑151 (MQ=60)

                                                                                                                                gcacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTC             >  LH00941:114:22FVMWLT1:2:2138:49490:21288/5‑151 (MQ=60)

                                                                                                                                gcacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTC             >  LH00941:114:22FVMWLT1:2:1121:22467:5516/5‑151 (MQ=60)

                                                                                                                                gcacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTC             >  LH00941:114:22FVMWLT1:2:1148:6982:16004/5‑151 (MQ=60)

                                                                                                                                gcacCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTC             >  LH00941:114:22FVMWLT1:2:2104:5937:26428/5‑151 (MQ=60)

                                                                                                                                   CCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCG          >  LH00941:114:22FVMWLT1:2:1250:10384:20616/1‑151 (MQ=60)

                                                                                                                                   CCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCG          >  LH00941:114:22FVMWLT1:2:1250:10374:20632/1‑151 (MQ=60)

                                                                                                                                   CCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCG          >  LH00941:114:22FVMWLT1:2:2124:15792:24603/1‑151 (MQ=60)

                                                                                                                                   CCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCG          >  LH00941:114:22FVMWLT1:2:2124:15801:24587/1‑151 (MQ=60)

                                                                                                                                   CCGGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCACTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAAAGCCCCG          >  LH00941:114:22FVMWLT1:2:2124:15820:24587/1‑151 (MQ=60)

                                                                                                                                     GGCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGAC        >  LH00941:114:22FVMWLT1:2:1231:6529:27421/1‑151 (MQ=60)

                                                                                                                                      GCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACT       >  LH00941:114:22FVMWLT1:2:1156:19028:19319/1‑151 (MQ=60)

                                                                                                                                      GCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACT       >  LH00941:114:22FVMWLT1:2:2268:29456:3114/1‑151 (MQ=60)

                                                                                                                                      GCTTTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCAAAAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCACTTAGAACGCTATCAAGCAGATCTGAAACGTACAGACT       >  LH00941:114:22FVMWLT1:2:2268:29447:3098/1‑151 (MQ=60)

                                                                                                                                         TTGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAAAGTCCCGACTTCT    >  LH00941:114:22FVMWLT1:2:1141:51718:11793/1‑151 (MQ=60)

                                                                                                                                          TGCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTT   >  LH00941:114:22FVMWLT1:2:2106:48242:11312/1‑151 (MQ=60)

                                                                                                                                           GCCGGTGTTC‑G‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTC  >  LH00941:114:22FVMWLT1:2:2209:41456:17269/1‑151 (MQ=60)

GTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGA‑GCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGTT‑‑T‑‑C‑‑G‑‑GG‑‑‑‑CA‑C‑G‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTC  >  AE015451_phaM1/1499351‑1499637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`