Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,587,531 |
G→A |
L195F (CTC→TTC) |
ugpQ ← |
glycerophosphodiester phosphodiesterase, cytosolic |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,587,531 | 0 | G | A | 96.5%
| 1443.3
/ 23.3
| 431 | L195F (CTC→TTC) | ugpQ | glycerophosphodiester phosphodiesterase, cytosolic |
| Reads supporting (aligned to +/- strand): ref base G (6/9); new base A (215/201); total (221/210) |
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 431 total aligned reads displayed.
AGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAGTAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCAAACGATGAC > NC_000913/3587384‑3587679
|
ttCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCCGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCGTTCAACTGCATCACTCGCGCTTTATTGAATAACt > 6:338700/1‑151 (MQ=255)
tCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACt < 8:225425/150‑1 (MQ=255)
tCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACt < 1:660568/150‑1 (MQ=255)
cGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTa < 5:883361/151‑1 (MQ=255)
ggACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTAt > 4:249026/1‑151 (MQ=255)
gACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATg < 6:645247/151‑1 (MQ=255)
gACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATg < 4:574903/151‑1 (MQ=255)
gACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATg < 2:1137656/151‑1 (MQ=255)
aCCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGa < 2:917069/151‑1 (MQ=255)
ccAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGAt < 4:1232001/151‑1 (MQ=255)
cAATCACGTCAATCGGATCGGTACAGTTGCAATCCACACCCCAGCGCAGGAACTCTGCTGCGCGCTGGGGTTTATTGACTTTATAAACCAGAATCCCCAGTCCGGCGTGTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGAtt < 2:699951/151‑1 (MQ=255)
cAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAGTAACTTATGAtt < 3:1599291/151‑1 (MQ=255)
aaTCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTg > 8:844817/1‑151 (MQ=255)
aTCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTga < 5:1283351/151‑1 (MQ=255)
cACGTCAGTCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTgag < 3:1164818/150‑1 (MQ=255)
aaCGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTgaga < 4:1475859/150‑1 (MQ=255)
gacAATCGCATCGCTACAGCTGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCCCACCGCTTAATTCCCGCAATAAACCAGAATCCGCACTCCCGCCACAGTCAACACCATCACACGCGCTGTAATGAGTAACTTAAGAATGAGATg > 6:246220/3‑150 (MQ=255)
gTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGa < 2:134420/151‑1 (MQ=255)
cAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCATCTCTGCTGCGCGCTTGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGaa < 4:1096425/150‑1 (MQ=255)
cAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGaa < 6:1304823/150‑1 (MQ=255)
cAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAAt < 4:898165/151‑1 (MQ=255)
aaTCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACACTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCCCTTAATTGAATAAGTTATGATTGAGATGAAt > 1:367049/1‑150 (MQ=255)
aTCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATag < 7:1348454/151‑1 (MQ=255)
cGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATag > 3:651509/1‑149 (MQ=255)
gCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAgaga < 3:575810/151‑1 (MQ=255)
gCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAgaga < 6:1380232/151‑1 (MQ=255)
ccATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAgaga < 1:872394/150‑1 (MQ=255)
aTCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACg < 2:125167/151‑1 (MQ=255)
tCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGc > 2:1067111/1‑151 (MQ=255)
ggTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGc > 8:1469608/1‑149 (MQ=255)
gTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGcagc > 1:5339/1‑151 (MQ=255)
gTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGcagc > 6:119393/1‑151 (MQ=255)
tACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTTTAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGAATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGcagcc > 1:72881/1‑151 (MQ=255)
tACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATATAGACGcagcc > 7:895021/1‑151 (MQ=255)
aGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGcagccc > 6:984167/1‑149 (MQ=255)
aTGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGcagcccagcc < 2:315853/151‑1 (MQ=255)
gCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCcgc > 3:974552/1‑151 (MQ=255)
gCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAAATGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCcgc < 7:390529/151‑1 (MQ=255)
cAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCcgcg > 7:1602489/1‑151 (MQ=255)
cAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCcgcg < 3:1293552/151‑1 (MQ=255)
ccACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCgg < 1:1457790/150‑1 (MQ=255)
cacaCCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTc < 3:415676/151‑1 (MQ=255)
acCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGt > 3:172433/1‑151 (MQ=255)
ccccAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGtt < 1:953796/151‑1 (MQ=255)
cccAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTc > 1:1209990/1‑151 (MQ=255)
ccAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTcg > 6:841945/1‑151 (MQ=255)
aGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTcgcg > 8:309561/1‑151 (MQ=255)
cgcAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGcc < 2:1497542/151‑1 (MQ=255)
gcagcaACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTcgaccc > 1:227778/1‑146 (MQ=255)
aCTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATTATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAgtcgtc < 5:1417315/151‑1 (MQ=255)
aCTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAgtcgtc < 3:1042272/151‑1 (MQ=255)
aCTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAgtcgtc < 5:576564/151‑1 (MQ=255)
gctgctgCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTcgc < 1:1025279/150‑1 (MQ=255)
tgctgcGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCgcgc > 7:729156/1‑151 (MQ=255)
tgcGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCAc > 7:500127/1‑151 (MQ=255)
gcgctcTGGGGTTTATTGACGGTATATACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGTGAGGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACt < 1:1546330/151‑1 (MQ=255)
cgcTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCAt > 8:1404477/1‑151 (MQ=255)
ttATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGcaac > 4:341093/1‑150 (MQ=255)
aTTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGcaacaa > 3:760803/1‑150 (MQ=255)
gACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACcg > 7:957375/1‑151 (MQ=255)
aCGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACcgc < 4:1168532/151‑1 (MQ=255)
gTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACcgcgcg > 3:317564/1‑151 (MQ=255)
aaaCCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGc > 8:1520901/1‑149 (MQ=255)
aaaCCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCa < 5:678941/150‑1 (MQ=255)
acccagtctcccgaGTCCGCCGGCTTTCAACTGCATCCCTCGCGCTTTATTGAATAACTTATGATTGAGATGACGAGATCCGCCGCGCAGCCGCGCGGGCAGTTCGCGGCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGt < 5:103027/138‑1 (MQ=255)
aaCCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATTATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGt > 8:1040890/1‑151 (MQ=255)
cAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTcc < 4:446745/151‑1 (MQ=255)
aGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCg > 4:788710/1‑151 (MQ=255)
gAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCgg < 6:174406/151‑1 (MQ=255)
aTCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCCCTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTg > 4:1582167/1‑151 (MQ=255)
aTCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTg < 7:628708/151‑1 (MQ=255)
aTCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTg < 8:664251/151‑1 (MQ=255)
tCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTgc > 5:39642/1‑151 (MQ=255)
cGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTgccg < 6:1465439/151‑1 (MQ=255)
cGCAGTCCGGCGTCTGTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTgccg > 5:265245/1‑151 (MQ=255)
gCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTgccgc < 6:747683/151‑1 (MQ=255)
cAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTgccgcc > 6:1051548/1‑151 (MQ=255)
aGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCt < 6:956329/151‑1 (MQ=255)
cGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCtgttg < 7:1412075/151‑1 (MQ=255)
ggCGTCTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCtgttgt > 8:421340/1‑151 (MQ=255)
cTTTCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGc > 3:883087/1‑151 (MQ=255)
ttCAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGATCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCtt > 8:736031/1‑151 (MQ=255)
cAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTc < 4:396641/150‑1 (MQ=255)
cAACTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCt < 5:1569479/151‑1 (MQ=255)
cTGCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTaa > 5:488021/1‑150 (MQ=255)
gCATCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGc < 3:514676/151‑1 (MQ=255)
aTCACTCGCGCTTTATTGAGTAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCAt > 8:1225525/1‑151 (MQ=255)
aTCACTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCAt > 2:519504/1‑151 (MQ=255)
aCTCGCGCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCa > 7:178828/1‑150 (MQ=255)
cgcgCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAAtct > 4:205182/1‑151 (MQ=255)
cgcgCTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAAt < 6:1558525/149‑1 (MQ=255)
cgcTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAAtctc > 1:136796/1‑150 (MQ=255)
cgcTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAAtctc > 8:1342996/1‑150 (MQ=255)
gcTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCaa < 7:1543639/151‑1 (MQ=255)
gcTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCa > 2:1571243/1‑150 (MQ=255)
cTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCaa > 8:477690/1‑150 (MQ=255)
cTTTATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCaa > 7:1146527/1‑150 (MQ=255)
ttATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCaaa < 8:1604884/149‑1 (MQ=255)
tATTGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCAAACg > 2:1686977/1‑150 (MQ=255)
tGAATAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCAAACGATgc > 7:6732/1‑150 (MQ=255)
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AGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTCAACTGCATCACTCGCGCTTTATTGAGTAACTTATGATTGAGATGAATAGAGACGCAGCCCAGCCGCGCGGTCAGTTCGCGCCAGTCGTCGCGCCACTCATCCAGCAACAAACCGCGCGGCAGTTCCGGTGCCGCCTGTTGTGCAGCTTCTAAAGCATCAATCTCAAACGATGAC > NC_000913/3587384‑3587679
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
