Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,084,932 |
G→T |
F297L (TTC→TTA) |
fdoG ← |
formate dehydrogenase‑O, large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,084,932 | 0 | G | T | 97.5%
| 1542.4
/ 22.8
| 438 | F297L (TTC→TTA) | fdoG | formate dehydrogenase‑O, large subunit |
| Reads supporting (aligned to +/- strand): ref base G (4/7); new base T (197/230); total (201/237) |
| Fisher's exact test for biased strand distribution p-value = 5.59e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 |
Only 100 of 438 total aligned reads displayed.
AGCCGTTTTCGTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTGAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGTTGTGAAT > NC_000913/4084784‑4085078
|
ccGTTTTCGTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCTTTGGTATAGGCTTCGGTGTATTCGCGGTTTAAtt < 7:419042/151‑1 (MQ=255)
ttCGTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTc < 7:220553/150‑1 (MQ=255)
tCGTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCa < 1:1503760/150‑1 (MQ=255)
tCGTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCa < 1:459909/150‑1 (MQ=255)
gTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTg < 6:1438797/151‑1 (MQ=255)
ccAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGtt < 3:1079340/151‑1 (MQ=255)
ccAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGtt < 2:495242/151‑1 (MQ=255)
ccAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGtt > 8:729151/1‑151 (MQ=255)
cAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTc < 4:1279770/151‑1 (MQ=255)
ttCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTcagc > 4:115398/1‑151 (MQ=255)
ttCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGGTTAATTTTTCAGTGTTcagc > 4:1350340/1‑151 (MQ=255)
tCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTcagc > 4:231251/1‑150 (MQ=255)
cATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTcagcag < 7:146358/151‑1 (MQ=255)
cATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTcagcag < 5:731552/151‑1 (MQ=255)
aTAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAgg > 6:737686/1‑151 (MQ=255)
aaGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGt < 6:635278/150‑1 (MQ=255)
aaGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTa < 1:1302146/151‑1 (MQ=255)
aGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTAc < 2:1131492/151‑1 (MQ=255)
aGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTAc > 8:679583/1‑151 (MQ=255)
gTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACa < 5:163942/151‑1 (MQ=255)
gTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTGAATTTTTCATTGTTCAGCAGGTACa < 5:1076276/151‑1 (MQ=255)
gTCCAGGAGGATTTATCGTACTTGCGTTATTCCGCGTCGTAGCCGGTGACCAGGCCATCTTCAAAGCCGTAATCCTCCCGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTGTAATTTTTCAGTGTTCAGACGGTAc > 2:877640/1‑150 (MQ=255)
tCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTAc > 4:1080536/1‑149 (MQ=255)
ccAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTGAATTTTTCATTGTTCAGCAGGTACAGc < 3:1421364/151‑1 (MQ=255)
aggaTTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATAc < 3:439771/151‑1 (MQ=255)
aggaTTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATAc > 3:984504/1‑151 (MQ=255)
aggaTTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATAc > 7:1062124/1‑151 (MQ=255)
aggaTTTATCGTACTTGAGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGGAATAc < 7:1387335/151‑1 (MQ=255)
ggaTTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACg < 2:1333264/151‑1 (MQ=255)
aTTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGcc < 2:357304/151‑1 (MQ=255)
tttATCGTACTTGCGTTTTTCCTCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCAAGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGCTAAAGCAATACCCCt > 6:879869/1‑151 (MQ=255)
ttATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTg > 6:1600512/1‑151 (MQ=255)
ttATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTg > 2:1414654/1‑151 (MQ=255)
tATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGTAGGTACAGCAATACGCCTg < 3:1525614/150‑1 (MQ=255)
aTCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGAc > 4:675081/1‑151 (MQ=255)
aTCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGAc > 1:234227/1‑151 (MQ=255)
tCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGAc > 1:100955/1‑150 (MQ=255)
gTACTTGCGTTTTTCCGCGTCGTAGACGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAgg < 4:505165/151‑1 (MQ=255)
aCTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGa > 6:1129016/1‑150 (MQ=255)
aCTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGa > 5:1574087/1‑150 (MQ=255)
tGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAg < 2:1064196/150‑1 (MQ=255)
gCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGc > 6:1312003/1‑150 (MQ=255)
tttCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGt < 6:37991/150‑1 (MQ=255)
tCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCa < 7:57963/150‑1 (MQ=255)
cgcgTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGt > 4:845629/1‑150 (MQ=255)
tcgtAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCATGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCgg > 3:1164474/1‑151 (MQ=255)
gtAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGaa < 5:472613/151‑1 (MQ=255)
aGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACg < 3:733985/151‑1 (MQ=255)
aGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATACGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACg > 1:1383608/1‑151 (MQ=255)
aCAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGc < 3:237154/151‑1 (MQ=255)
aCAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGc > 4:351673/1‑151 (MQ=255)
ccATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCAtagt < 8:1170386/151‑1 (MQ=255)
ccATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCAtagt < 8:879312/151‑1 (MQ=255)
cATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCAtagt > 5:1415330/1‑150 (MQ=255)
tCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTTTTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCAtagtag < 7:98013/147‑1 (MQ=255)
tCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTc < 7:697859/149‑1 (MQ=255)
tCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTc < 2:1681856/149‑1 (MQ=255)
tCAAAGCCGAAATCCTCACGCACGATCAGGCTGCCGTTGGTATAGGCTTCCGTGAATTCGCGGTTTAATTTTTCATAGTTCACCAGGTACAGCAATACCCCTGACAGGAAAGCAAAGACAGTACCGGAACGAATAGGGGCATAGTAGTCa > 1:615472/1‑150 (MQ=255)
cAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAg < 8:1311846/150‑1 (MQ=255)
aaGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTa < 1:1557924/151‑1 (MQ=255)
gCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTAcc < 7:859141/151‑1 (MQ=255)
ccGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTAccg < 3:574256/151‑1 (MQ=255)
aaTCCTCACGCACGATCAGGCTGGCGTTGGTATAGAATTCGGTGTATTCGCGGTTTAATTTTTAATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAAAGAATAGGGGCATAGTAGTCAGCTAccgccgc > 6:479346/1‑151 (MQ=255)
aTCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTAccgccgcc > 2:1477578/1‑151 (MQ=255)
tCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTAc > 2:785102/1‑151 (MQ=255)
cacgcacgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTAcg > 7:309782/1‑151 (MQ=255)
cacgcacgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTAcg < 1:845455/151‑1 (MQ=255)
cgcacgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTAcgcg > 2:907405/1‑151 (MQ=255)
acgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTa > 8:393453/1‑150 (MQ=255)
acgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTa > 1:34557/1‑150 (MQ=255)
cgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTaaa < 3:881984/151‑1 (MQ=255)
cgATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTaaa < 6:219093/151‑1 (MQ=255)
gATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTaa > 8:460963/1‑149 (MQ=255)
cAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCg > 8:224164/1‑150 (MQ=255)
aGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAg < 5:847174/151‑1 (MQ=255)
tGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGgatc > 3:63303/1‑151 (MQ=255)
ggCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTAGAGCAATACGCCTGACAGGAAAGCAATGGCAGTACCGGAACGAATAGGGGGATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGgat < 2:1183787/149‑1 (MQ=255)
ggCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGgatcg < 8:1049588/151‑1 (MQ=255)
gCGTTGGTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGgatcga < 8:1503040/151‑1 (MQ=255)
ggTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATcac > 5:571774/1‑150 (MQ=255)
ggTATAGGCTTCGGTGTATTCGCGGTTGAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATcac < 7:1251215/150‑1 (MQ=255)
gTATAGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACaa < 3:127303/151‑1 (MQ=255)
tataGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACaa > 5:233577/1‑150 (MQ=255)
ataGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAAt < 8:777352/150‑1 (MQ=255)
ataGGCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATc < 8:627236/151‑1 (MQ=255)
agtcTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCa < 7:460515/147‑1 (MQ=255)
ggCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGc > 4:285249/1‑151 (MQ=255)
ggCTTCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGc > 8:1663019/1‑151 (MQ=255)
ttCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTc > 2:156358/1‑151 (MQ=255)
tCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCtt < 6:295941/149‑1 (MQ=255)
tCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCtt < 7:1116340/149‑1 (MQ=255)
tCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTc < 6:1043513/150‑1 (MQ=255)
tCGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGGCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTc < 4:710969/150‑1 (MQ=255)
cGGTGTATTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTcgc > 8:1381640/1‑151 (MQ=255)
tATTCGCGGTTGAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGt > 3:179059/1‑151 (MQ=255)
aTTCGCGGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGtt < 5:1264441/151‑1 (MQ=255)
aTTCGCGGTTTAATTTTTCATTGTTCAGCAGGTAAAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGtt > 7:879319/1‑151 (MQ=255)
cgcgGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGTtgtg > 1:557641/1‑151 (MQ=255)
cgGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGTTGTGa > 4:911295/1‑150 (MQ=255)
cgGTTTAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCCTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGTTGTGa > 4:143889/1‑150 (MQ=255)
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AGCCGTTTTCGTCCAGTTCATAAGTCCAGGAGGATTTATCGTACTTGCGTTTTTCCGCGTCGTAGCCGGTGAACAGGCCATCTTCAAAGCCGTAATCCTCACGCACGATCAGGCTGGCGTTGGTATAGGCTTCGGTGTATTCGCGGTTGAATTTTTCATTGTTCAGCAGGTACAGCAATACGCCTGACAGGAAAGCAATGTCAGTACCGGAACGAATAGGGGCATAGTAGTCAGCTACCGCCGCCGTACGCGTAAAGCGAGGATCGATCACAATCAGCTTCGCGCCGTTGTGAAT > NC_000913/4084784‑4085078
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
