Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I5 R1
|
18 |
424.9 |
13427302 |
97.8% |
13131901 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,247,487 |
+A |
intergenic (+59/‑286) |
exuR → / → yqjA |
hexuronate regulon transcriptional repressor; autorepressor/general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,247,486 | 1 | . | A | 100.0%
| 1484.7
/ NA
| 389 | intergenic (+58/‑287) | exuR/yqjA | hexuronate regulon transcriptional repressor; autorepressor/general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (193/196); total (193/196) |
Only 100 of 422 total aligned reads displayed.
ACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGT‑ATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGCTT > NC_000913/3247336‑3247631
|
aCCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGt < 4:1111720/151‑1 (MQ=255)
ccAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGt > 3:1281932/1‑150 (MQ=255)
gacgacTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGt‑aataaa < 6:1335765/151‑6 (MQ=255)
gacgacTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGt‑aataaa < 7:786216/151‑6 (MQ=255)
acgacTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAg < 3:983867/151‑1 (MQ=255)
cgacTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAgt < 3:1260059/151‑1 (MQ=255)
gacTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAgtg > 4:1545232/1‑151 (MQ=255)
tCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCa < 3:746270/150‑1 (MQ=255)
tCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCa < 6:206203/150‑1 (MQ=255)
gAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGcc < 1:1332049/151‑1 (MQ=255)
aGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCt > 8:453454/1‑151 (MQ=255)
aGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGGCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCt > 6:990200/1‑151 (MQ=255)
gTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCtg < 1:1163742/151‑1 (MQ=255)
aaTGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTa < 3:528336/151‑1 (MQ=255)
gCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTaact > 8:295775/1‑149 (MQ=255)
cGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATcc > 2:64619/1‑151 (MQ=255)
gACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCct < 2:117407/151‑1 (MQ=255)
gACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCct > 7:571326/1‑151 (MQ=255)
gACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCct > 2:732100/1‑151 (MQ=255)
caCCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCct < 4:123073/150‑1 (MQ=255)
aCCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCctc > 4:350620/1‑151 (MQ=255)
aCCCCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCct > 1:395590/1‑150 (MQ=255)
ccGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCCCCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCctct > 5:1438359/1‑151 (MQ=255)
gCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCTGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCg < 1:867470/151‑1 (MQ=255)
gCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCg < 2:1662303/151‑1 (MQ=255)
tatctatTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGcc > 6:807736/1‑151 (MQ=255)
tctatTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAc > 5:1079838/1‑151 (MQ=255)
atTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCAcc < 7:660981/149‑1 (MQ=255)
cGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTccc > 1:579528/1‑151 (MQ=255)
cGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTcc < 8:1646292/150‑1 (MQ=255)
ccGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCt > 2:429706/1‑151 (MQ=255)
aaaCCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCAt > 1:1423087/1‑151 (MQ=255)
aaCCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCAtt > 7:1273033/1‑151 (MQ=255)
cGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGc < 1:1677527/151‑1 (MQ=255)
ggtggtGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAACTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGc > 4:603851/1‑150 (MQ=255)
gCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCa < 4:477109/151‑1 (MQ=255)
aTCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAgc > 8:143011/1‑150 (MQ=255)
aTCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGAAAAATc > 5:942733/1‑148 (MQ=255)
tcGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTc > 6:1483325/1‑151 (MQ=255)
tcGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGAGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTc > 3:894725/1‑151 (MQ=255)
cGATACAGCAACCAGCGGGAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCTTCGGTAAGCGAAAATTAATAAACTGGCAGCCCGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCATCAAAATCAGACTc < 7:483530/150‑1 (MQ=255)
gATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTccc > 4:1453100/1‑150 (MQ=255)
aTACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCAc < 1:327824/151‑1 (MQ=255)
aTACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCAc < 6:391491/151‑1 (MQ=255)
cAGCGACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGa < 8:1615302/151‑1 (MQ=255)
aGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGAc < 6:1013971/151‑1 (MQ=255)
gCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACa < 8:541915/151‑1 (MQ=255)
ccaccaGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACAt < 7:1483620/151‑1 (MQ=255)
ccaccaGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACAt < 1:1039301/151‑1 (MQ=255)
caccaGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATg < 3:1579984/151‑1 (MQ=255)
accaGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGt > 1:29100/1‑151 (MQ=255)
caGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTaa < 6:501311/151‑1 (MQ=255)
caGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTaa < 3:1390650/151‑1 (MQ=255)
aGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAAt > 4:87569/1‑151 (MQ=255)
cGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAAttt < 3:21167/151‑1 (MQ=255)
gCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTg < 4:1652268/151‑1 (MQ=255)
cAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTg > 2:1316599/1‑150 (MQ=255)
cAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGa < 3:1508602/151‑1 (MQ=255)
aGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGAt < 3:1341753/151‑1 (MQ=255)
tAAATGAAATTCCTGTCGGACAGGCGCTGCAATGATCCTGTTTTTCTCGTCGGTAAGCTAAAAGTAATAAAGTGTCAGCCTTTGTAAATCCTCTAGCCAGCCTCACCTTCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGAtt < 3:371223/150‑2 (MQ=255)
aaaTGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCGTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGCCTCCACGGACATGTAATTTTGATAAc > 3:83741/1‑151 (MQ=255)
aaaTGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCAGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTATATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATaa < 6:1436296/150‑1 (MQ=255)
gAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaa < 8:232170/150‑1 (MQ=255)
aaaTTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaaca < 2:1042480/151‑1 (MQ=255)
aaaTTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGaac > 5:1503853/1‑150 (MQ=255)
aTTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGTCATGTAATTTTGATAACGaacaac > 8:1257404/1‑151 (MQ=255)
ccTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGt < 5:184131/150‑1 (MQ=255)
gTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTg < 6:678538/149‑1 (MQ=255)
gTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTg < 5:627622/149‑1 (MQ=255)
cGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCCCCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCtt > 3:1149724/1‑151 (MQ=255)
ggCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTa < 2:15609/151‑1 (MQ=255)
ggCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTa < 8:1297284/151‑1 (MQ=255)
cgcTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCCCCCTCCCCTGCATTCAGCAAAATCAGACTCAACGGACATGTAATTTTGATAACGAACAACGTTCACCTTTGTTAc > 8:614977/1‑150 (MQ=255)
cgcTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTAc > 5:347412/1‑150 (MQ=255)
cgcTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACa < 7:1584095/151‑1 (MQ=255)
gCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAAtt < 7:18581/150‑1 (MQ=255)
gCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTa < 5:1336366/151‑1 (MQ=255)
aTGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGAt < 6:1239205/151‑1 (MQ=255)
gcgcCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTc < 1:1576960/151‑1 (MQ=255)
gcgcCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTc < 5:1576841/151‑1 (MQ=255)
gcgcCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTc > 8:1066659/1‑151 (MQ=255)
gcCTGTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCa > 5:82000/1‑150 (MQ=255)
gTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAAttt < 5:256847/150‑1 (MQ=255)
gTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAAttt < 7:1317488/150‑1 (MQ=255)
gTTTGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTg < 7:1421076/151‑1 (MQ=255)
ttGTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGa > 4:1312842/1‑150 (MQ=255)
gTCTCGTCGGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGACCAACGTTGACCTTTGTTACAATTAGATTCAATTTGAAtt > 3:67606/1‑151 (MQ=255)
cgtcgGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAAttt < 6:1616330/148‑1 (MQ=255)
cgtcgGTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAAttt < 7:1195421/148‑1 (MQ=255)
gTAAGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGttttt < 1:1083034/151‑1 (MQ=255)
aGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGa > 2:930961/1‑150 (MQ=255)
aGCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGa > 7:361249/1‑150 (MQ=255)
gCGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAAt < 5:702544/151‑1 (MQ=255)
cGAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATg > 4:995127/1‑151 (MQ=255)
gAAAAGTAATAAAGTGTGAGACTGTGTAAATCCTCTCGGCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGc < 3:1055216/151‑1 (MQ=255)
gAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGc < 7:1072620/151‑1 (MQ=255)
gAAAAGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGc > 1:771308/1‑151 (MQ=255)
aaaaGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGCt > 8:1244807/1‑151 (MQ=255)
aaaGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGCtt > 8:6932/1‑151 (MQ=255)
aaaGTAATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGCtt < 8:834983/151‑1 (MQ=255)
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ACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGAAATTCCTGTCCGACAGGCGCTGCAATGCGCCTGTTTGTCTCGTCGGTAAGCGAAAAGT‑ATAAAGTGTCAGCCTGTGTAAATCCTCTCGCCACCCTCCCCTGCATTCAGCAAAATCAGACTCCACGGACATGTAATTTTGATAACGAACAACGTTGACCTTTGTTACAATTAGATTCAATTTGAATTTATGTTTTTGAATGCTT > NC_000913/3247336‑3247631
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
