Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F90 I3 R1 11 267.5 5183891 88.6% 4592927 276.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,442,896 A→T F401Y (TTC→TAC)  secY ← preprotein translocase membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,442,8960AT97.1% 819.1 / NA 244F401Y (TTC→TAC) secYpreprotein translocase membrane subunit
Reads supporting (aligned to +/- strand):  ref base A (4/3);  new base T (113/122);  total (119/125)
Fisher's exact test for biased strand distribution p-value = 7.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

GAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCA  >  NC_000913/3442600‑3443190
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                      
    actctgcagcaaaaTCAGCCTTGGCGATTTTTATGCTTCGGATCGGCACTTCAAAT‑CATG‑CGTATGACACCATCACGCTTAACGATTTTGAAGTTACGGCATAATTTCTTGACGTAAGCACGAACTTTCATTTGTACTCTCCGTAACTTCTCGTGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAAc                                                                                                                                                                                                                                                                                                <  1:2244455/291‑1 (MQ=255)
      aatGCGTAAAAATCAGCCCTGGCGCTGTTTATGCTTAGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACgg                                                                                                                                                                                                                                                                                              <  1:1123884/300‑1 (MQ=255)
        tgggAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTAAGGTTCGCCTTCTTCAATGCAGACCCATACTGACTGGACATCATCAAATTTTGCACTTAATCCATAACGTCCATAATCACGACAAAAACGATAAGCAGTTAGTTCCCACCGTAGTAGAACGGt                                                                                                                                                                                                                                                                                             >  1:1028622/4‑300 (MQ=255)
         gCGAAAAAATCAGCCTTGGCGCTGTTTATGCCTCGGCACGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTAc                                                                                                                                                                                                                                                                                           <  1:2221284/301‑1 (MQ=255)
          aatcaaaaTCAGCCGTGGGGTTGGTTATGCTTCAGCTTTCACCTGAAAATGCACA‑‑GGAGGACCCCATCACGCTTAACGTTTTTTCAGTTACGGCATAAATTCTTGGCGGAAGCACGAACTTTCATTTTTCCTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACt                                                                                                                                                                                                                                                                                          <  2:1898765/297‑1 (MQ=255)
                 aTCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTATTAGAACGGTACTTTCAttt                                                                                                                                                                                                                                                                                   >  1:592290/1‑300 (MQ=255)
                          ggCGCTGTTTATGATTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGc                                                                                                                                                                                                                                                                           <  1:2363378/300‑1 (MQ=255)
                             gcTGTTTATGCTTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGa                                                                                                                                                                                                                                                                       <  1:382842/301‑1 (MQ=255)
                                    aTGCTTCGGCTCGGAACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGTCTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCgg                                                                                                                                                                                                                                                                <  1:1834175/301‑1 (MQ=255)
                                     tGCTTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATAACGACAACAACGATTAGAAGGGAGGTACCACCGGCGTAGAACGGTACTTGACTTCCACCACGCATGAAATCCggg                                                                                                                                                                                                                                                               >  1:1315451/1‑301 (MQ=255)
                                           ggctcgtcACTGCAAA‑‑CACACCGGATAACACCACCACGCTGAACGTATTTGCAGTTACGGCATAATTTCTTCACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAgg                                                                                                                                                                                                                                                         <  1:2313899/301‑1 (MQ=255)
                                            gctcggcACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGt                                                                                                                                                                                                                                                                                             <  2:1329566/264‑1 (MQ=255)
                                            gctcggcACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATTAACTCCGGGATAAggg                                                                                                                                                                                                                                                        >  1:1332226/1‑300 (MQ=255)
                                            gctcggcACTGCAAAA‑CAAA‑CTGATTACACCATCAAGCTTAACGATTTTGCAGTAACGGCATAATTTCTTGACGGAAGAACGAACTTTCATTTGTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGc                                                                                                                                                                                                                                                        <  2:460594/301‑1 (MQ=255)
                                            gctcggaACTGCAAAT‑CACA‑CGGATTACACCATACCACTTACCGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTGCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGc                                                                                                                                                                                                                                                        <  1:1011083/301‑1 (MQ=255)
                                                ggcACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGc                                                                                                                                                                                                                                                        >  1:1071166/1‑297 (MQ=255)
                                                      gCAAAT‑CACA‑CAGATGACACCATCACGCTTAACGATTTTGCAGTTAAGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTCGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCGATAAAGTCCATAATAACGAAAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTAATTGCATCACACATGACATCCGGGATCAGGCAGaaaacagt                                                                                                                                                                                                                                              >  1:1451795/1‑297 (MQ=255)
                                                               ca‑cGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGAAAAGCAGAGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCCTCACGCATGAACTCCGGGACCAGGCAGAAAAAGGTAATAAAc                                                                                                                                                                                                                                       >  2:2060228/1‑300 (MQ=255)
                                                                  cGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCACTTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGCGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTACTTTCATACCGCCTGAACTCCTGGATCCGGCAGAAAAAGGGAATAAACaa                                                                                                                                                                                                                                     >  2:1603755/1‑299 (MQ=255)
                                                                    gatgactcagtctagCTTAACCATTTTGGAGTTTCGGCCGAATTTCTTGTCGGTAGAACGAACTTTGAGTTGTCCTCTCAGTAACTTCTCTGGCTACCAATTATCGGCCATATCCTTTCAGTTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCCCGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAgc                                                                                                                                                                                                                                    <  2:1028337/285‑1 (MQ=255)
                                                                        cccccctcccccTTAACTATTCTGCAGTTACGGCATAATTTCTTGACGGAAGCACGCACTCTCCTTTTTACTCTCCTTAACTTCTCGGGCGCCCAATTATCGTCCGTAGCCGTTCAGGTTCGCCTTCATCAATGCAAACTCATACTGACTGGACATCAGCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGTTAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTACTATACAGCGCacca                                                                                                                                                                                                                              <  2:1300704/290‑1 (MQ=255)
                                                                           ccATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCAACCGTAGTAGAACGGTAATTTCATTGCATCGCGGATGAAATCCGGGATCAGGCAGATAAAGGTAATATACAgcgccacaaac                                                                                                                                                                                                                           >  2:373360/1‑294 (MQ=255)
                                                                               gaCGCTTAACGTGTTTGCAGTATCGGCAAAATTTCTTGGCGGAAGCACGAACTTTCTTTTTTCCCATCCGTAACTGCTCGGGCGACCAATTATCGGCCTGAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAg                                                                                                                                                                                                                         <  2:2431792/298‑1 (MQ=255)
                                                                               accctttgaCGGTTTTGAAGTTACGGCATAATTTCTTGACGTAATCACGAACTTTCATTTTTACTCTCCGTAAATTCTCGGGCGACCAAATATCCGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAggg                                                                                                                                                                                                                       <  1:1379804/293‑1 (MQ=255)
                                                                                   cTTAACGATTTTGTAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTAGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGACCAGGCAGATAAAGGTAATATAc                                                                                                                                                                                                                                       >  1:973620/1‑281 (MQ=255)
                                                                                    ttAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACg                                                                                                                                                                                                                                                                                               <  2:2225681/224‑1 (MQ=255)
                                                                                     tAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAAATCCGGGCTCAGTCAGAGAACGGTAATATACAGCGCACCAAACAGGGTCaagg                                                                                                                                                                                                                 >  2:2209392/1‑298 (MQ=255)
                                                                                       aCGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCAGTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATCCTGACTGGACATCATCAGAGTTTGCCCTTGAGCTAGAAAGTCCATACTCACGACAACAACGATAAGCAGTGACGTACCACCGTAGTCGACCGCTACTTTCATTGAATCACTCATGAAATCCGGGAACCGGCAGATACAAGTAAaataaacacaacaaccacgtgtcagtgcg                                                                                                                                                                                                               >  2:794158/1‑276 (MQ=255)
                                                                                            gtttcacttaacgactAATTTCTTGATGAATGAACGAAATTTCCTTTGTACTCTCCCTATCTTCTCGGCCAACCCATTATCGGCCGTAACCTTGCAGGTTCGCCTTCTTCCATGCAGACTCATACTGACTGGACATCATCCGAGTTTGCACTTGAGACATAAAGTCCATAATAACGACAACAACTATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTc                                                                                                                                                                                                            <  2:874356/284‑1 (MQ=255)
                                                                                             ttGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCCTTGCATCACGCATGAACTCCGGTATAAAGCAGATAAAGGAAATATACAGCCCAACAACCAGGGTAAGGCGGGTCAtt                                                                                                                                                                                                         >  2:458395/1‑301 (MQ=255)
                                                                                                    aacctcATAATTTCTTCACGTAAACTCATACTGTCAGTGTTGCTTTTCCTAACTGCACGTGCGACGAATTATCGGCCGTAACCTTTCTTGTTCGCCCTCTTCAATGCAGCCTCAAACTTCAGGCACAGCAGCAGAGCTTGCACTTGATCCATAAAGCCGATAATCACGACAACAACGAGAAGCAGGTAGGTCTCACCGAATGAGAACGTTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAATGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCAGTACTTTAt                                                                                                                                                                                                  <  2:411063/296‑1 (MQ=255)
                                                                                                     aCGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCa                                                                                                                                                                                                                                                           >  2:2582020/1‑243 (MQ=255)
                                                                                                      cgccATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCa                                                                                                                                                                                                           <  1:2183863/287‑1 (MQ=255)
                                                                                                       ggCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGCTAAGCAGTGATGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACACCGGGATAAGGCAGATAAAGGTAATAAACAGCACCCCAACCAGGGGCAGGCGGGACATTACTCTagacg                                                                                                                                                                                               >  2:2452833/1‑297 (MQ=255)
                                                                                                        gCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGat                                                                                                                                                                                              <  1:483489/301‑1 (MQ=255)
                                                                                                             aTTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTTGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGAGAAAGGTAATATACAGCACACAAAACAGGGGAAGCTGGGTCATTCGTAGATCGACATACt                                                                                                                                                                                         >  2:807558/1‑301 (MQ=255)
                                                                                                                 cTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCAGCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGc                                                                                                                                                                                     >  2:501998/1‑301 (MQ=255)
                                                                                                                    gACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGcc                                                                                                                                                                                    <  1:2216483/299‑1 (MQ=255)
                                                                                                                        gAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGAATGAACTCCGGGa                                                                                                                                                                                                                                                              >  1:2492640/1‑221 (MQ=255)
                                                                                                                            cACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTTCATCACGCATGAACTCCGGGATCAGGCAGACAAAGGTAAGATACAACGCACCAACCAGGGTACGGAGGGCAATTACttagctcggaagaacgtcggtaaggga                                                                                                                                                                            >  2:841159/1‑274 (MQ=255)
                                                                                                                               aaaCTTGCATTTTTACCAGCCGTAACTTCTGGGGCGACAAATTATTGGAAGTATCATTTCAGGTTCCCCTTCTTCAATGAAGACTCATACCTACTGAACATCATCAGAGGTTGCAATTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCg                                                                                                                                                                       <  1:2453567/300‑1 (MQ=255)
                                                                                                                                                 tcCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACa                                                                                                                                                      >  1:2338864/1‑300 (MQ=255)
                                                                                                                                                  ccGTAACTTCTCGGGCGAACAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACa                                                                                                                                                      <  1:458504/299‑1 (MQ=255)
                                                                                                                                                   cGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAAt                                                                                                                                                   <  1:1677862/301‑1 (MQ=255)
                                                                                                                                                     tAACTTCCCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGCTAATATACAGCGAACCAACCAGGGTCAGGCCGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCTGACGAATTCCTGGTACGAATGc                                                                                                                                                 >  1:1850850/1‑301 (MQ=255)
                                                                                                                                                     aaaCTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGc                                                                                                                                                 <  1:855014/300‑1 (MQ=255)
                                                                                                                                                       aCTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGa                                                                                                                                                                                                                                                                       >  2:1812501/1‑181 (MQ=255)
                                                                                                                                                          tctcGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGCGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGGCATTACTTTATCGATATACTTCGACGTTTGCTCTCCCGGCCGAATTCCTGGTAAAAATGCCCCgg                                                                                                                                            >  2:1148976/1‑301 (MQ=255)
                                                                                                                                                              gggCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActt                                                                                                                                        <  1:1604236/301‑1 (MQ=255)
                                                                                                                                                                gCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtct                                                                                                                                      >  1:1880859/1‑301 (MQ=255)
                                                                                                                                                                      aaTTCTCGGCGGTGGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTAATACGGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAACCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGt                                                                                                                                <  1:1444333/301‑1 (MQ=255)
                                                                                                                                                                            cGGCCGTAGCCTTTCAGGTTAGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGAct                                                                                                                                         <  2:1349818/286‑1 (MQ=255)
                                                                                                                                                                                  tAGCCTTTCAGGTTAGCCTTCTTCAAGGCAGACCACTCCTGACAGGACAACATCAGATTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGt                                                                                                                      <  2:1448762/299‑1 (MQ=255)
                                                                                                                                                                                    gCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAgg                                                                                                                                                                                                                                               >  1:877066/1‑176 (MQ=255)
                                                                                                                                                                                            ggTTCGCCTTCTTCCAAGCAAAACAATACGGACGGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGtt                                                                                                          <  2:2230609/301‑1 (MQ=255)
                                                                                                                                                                                            ggTTCGCCTTCTTCAATGCAGCATCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGttt                                                                                                                                                                                <  2:1505485/231‑1 (MQ=255)
                                                                                                                                                                                            ggTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGttt                                                                                                                                                                                >  1:1505939/1‑231 (MQ=255)
                                                                                                                                                                                               tCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCTCGCATGAACTCCGGGGTCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCAGGACGAATTCCTGGTACAAATGCACCGGTCCTTTTCAGGTTATCTCCTCTTTCGCGCGGGTGGa                                                                                                        >  2:1657825/1‑300 (MQ=255)
                                                                                                                                                                                                ccccTTCCTAAATGCAAACTCCTACTGTCTGGAAAGCATAAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCGGTGAGGCCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTGTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGaaa                                                                                                      <  2:2352932/299‑1 (MQ=255)
                                                                                                                                                                                                  acctggagatcttccgatcttACTGACTTGGCATCCTCAGAGTTTGCACTTGAGCCATAAAGGCCATCATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTATCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGaaaa                                                                                                     <  2:1477178/280‑1 (MQ=255)
                                                                                                                                                                                                   cttcttCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAATAGCACCGGACTTCTTCAGGTTacc                                                                                                                            >  2:1070780/1‑274 (MQ=255)
                                                                                                                                                                                                         cAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAAt                                                                                                                                                   >  1:2431273/1‑247 (MQ=255)
                                                                                                                                                                                                           aTGCAGACTCATACTGACTGGACATCATCATAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAgg                                                                                                                                                                                                                        <  1:1240652/176‑1 (MQ=255)
                                                                                                                                                                                                           aTGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAgg                                                                                                                                                                                                                        >  2:1240289/1‑176 (MQ=255)
                                                                                                                                                                                                              cAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACTATAAGCAGTGAGGTCCCATCGTAGTAGAACGGTTCTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAATGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACGTTATCTAGATACTTCGCCGTTTGCTCTCCCGGCCGAATTCGTGGTACAATTGCACCGGACTTCTTCAGGTGATCTGCAGTTTCACGCGGGTTGCAAACCAACACCgtgtt                                                                                        >  1:61621/1‑300 (MQ=255)
                                                                                                                                                                                                               aGACTCAAACTGACTGGACATCATCAGAGGTTGCACTTGAGCCACAAAGGCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTag                                                                                       <  1:807769/301‑1 (MQ=255)
                                                                                                                                                                                                                gACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGAATTCTTCAGTTTCACCGCTGTTTCACGCGGGTTGAAAACCAACGCCgttg                                                                                         >  2:920635/1‑296 (MQ=255)
                                                                                                                                                                                                                  cTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTCCTTTATCGATATACTTCGCCGTTTGCTCTCGCGGACGAATTCCTGGTACCAATGCACCGTACTTCTTCAGGTTATCTGCTGTTTCACCCTGCTTGagatcggacgggcacacgtcg                                                                                    >  1:558582/1‑281 (MQ=255)
                                                                                                                                                                                                                   acATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTagaaga                                                                                   <  1:2048858/300‑1 (MQ=255)
                                                                                                                                                                                                                            ctgGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTatacacaaccgatg                                                                           >  1:506228/1‑287 (MQ=255)
                                                                                                                                                                                                                              agacatacgcatattttGCAATTGAGCCATAAAGGCCATAATCACGACAACATCGATAAGCAGGTAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACagaagaag                                                                        <  2:2319328/287‑1 (MQ=255)
                                                                                                                                                                                                                                 catcatCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTAACGCGGGTTGAAAACCAACGCCGGGTAGAAGAAACagacaaca                                                                        >  2:1556905/1‑293 (MQ=255)
                                                                                                                                                                                                                                    catcaGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAata                                                                                                                                                                                                                                          <  2:613697/133‑1 (MQ=255)
                                                                                                                                                                                                                                    catcaGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAAca                                                                                                   >  1:2501149/1‑267 (MQ=255)
                                                                                                                                                                                                                                    catcaGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAAc                                                                                                    >  1:371092/1‑267 (MQ=255)
                                                                                                                                                                                                                                     atcaGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTTTCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACGAAAGAAGACGATTg                                                                 >  1:2173551/1‑301 (MQ=255)
                                                                                                                                                                                                                                        cacgccgcccttccgatcttAACGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAg                                                              <  2:709640/282‑1 (MQ=255)
                                                                                                                                                                                                                                             ccgaaCTTGAGCCAAAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGGAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGc                                                          <  2:1182506/296‑1 (MQ=255)
                                                                                                                                                                                                                                                cACTTAAGCCACAACGGCCATAATCACGCAAAAAACTATAAGCAGGGAGGTCCCACCGTAGTAGAGCGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATag                                                      <  2:2309753/301‑1 (MQ=255)
                                                                                                                                                                                                                                                   ttGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCCCGCGGGTTGAAAACCAAAGCCGTGTAGACGAAACACAAGAAGATGATTGAAAACCCATAGAGt                                                   >  1:262305/1‑301 (MQ=255)
                                                                                                                                                                                                                                                    tGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCCCCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGCGTAGAATAAACAGAAGAAGATGATTTCAGACGccacacgg                                                   >  1:1182866/1‑293 (MQ=255)
                                                                                                                                                                                                                                                       gCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCg                                                                                                                                                                                                                <  1:2581458/140‑1 (MQ=255)
                                                                                                                                                                                                                                                       gCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAaca                                               <  1:802614/301‑1 (MQ=255)
                                                                                                                                                                                                                                                           tAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAg                                                              >  1:709835/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                 ccATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACAGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGGTGAAAACCAACGACGGGTAGACGATACAGAAGAAGATGATTGCAGTCGAATAGGGTAACACAGAAAGAgg                                     >  1:1101706/1‑301 (MQ=255)
                                                                                                                                                                                                                                                                 ccAAAATCACGACAACAACGAAAAGAAGTTAGGACCCACCGTAGTAGCACGGTAATTTCCTTGCATCACGCATGAACGCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCgg                                     <  2:2172928/301‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aTAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTCCTGTTTCACGCGGGCTGAAAACCAACGCCGTGTAGAAGAACCAGAAGAAGATTATAGCAGAAGCACAGAAGAACACATAAAGCGttt                                   >  1:894054/1‑301 (MQ=255)
                                                                                                                                                                                                                                                                       acACGCCAACAACAGTACGCAGTGAGAGCCCACCGAATAAGAACGATACTTTCATTCCAACACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATGCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGccc                               <  2:1705380/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cACGACAAAAACCATAAGGAGTGAGGTCCCACCGTAGTAGAACGTTACTGTCAATGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGccc                               <  2:592138/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATCGAGTAACACATaagatcggagcacacg                            >  1:2135383/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             caacaaCGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAAAAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGGGGTTGCCCAGGCt                          >  2:1006846/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                caacGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGt                                                                                                                                <  1:1769005/195‑1 (MQ=255)
                                                                                                                                                                                                                                                                                caacGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGt                                                                                                                                >  2:1768483/1‑195 (MQ=255)
                                                                                                                                                                                                                                                                                  acGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATg                                                                                                                                                  >  2:2499486/1‑175 (MQ=255)
                                                                                                                                                                                                                                                                                   cGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGttagatcggaagagcggg                   >  2:1869773/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                                     aTAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGCGTAACACATAAAGCGGTTGCCCa                              >  1:1592783/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        aGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAACCCAACGCCGTGTAGAAGAAACAGAAAAAGATGATTGTAGAAGCATAGAGTAAACAATAAAGCGGGTGAGCAGGACGCAAAGACa                 >  2:2043858/1‑298 (MQ=255)
                                                                                                                                                                                                                                                                                             tGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACAAATAAAGCGGTTGCGCAGGCTGCAAATCAAGCGAAAtt         >  1:2394802/1‑301 (MQ=255)
                                                                                                                                                                                                                                                                                              gAGGTCCCACCTAAGTAAAACGGTACTTTCATTGCAACACGAATAAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAAttg        <  2:1352563/301‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                   cccACCGTAGTAGAACGGTAATTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTGCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATtgttgt    <  1:1658331/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                      
GAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAAT‑CACA‑CGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTCA  >  NC_000913/3442600‑3443190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A