Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F18 I0 R1
|
274 |
115.5 |
2655328 |
86.7% |
2302169 |
226.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,749,428 |
T→G |
19.7% |
G66G (GGT→GGG) |
sgbU → |
putative L‑xylulose 5‑phosphate 3‑epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,749,428 | 0 | T | G | 19.7%
| 253.7
/ 7.4
| 116 | G66G (GGT→GGG) | sgbU | putative L‑xylulose 5‑phosphate 3‑epimerase |
| Reads supporting (aligned to +/- strand): ref base T (26/57); new base G (25/4); total (55/61) |
| Fisher's exact test for biased strand distribution p-value = 2.63e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 117 total aligned reads displayed.
TTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGCAGTCGAACAGGCGGCGGC > NC_000913/3749193‑3749664
|
tttCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGtt < 2:1065329/239‑1 (MQ=255)
cATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGa < 2:908569/239‑1 (MQ=255)
tGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGGGC‑GGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGTTGGGAt > 2:928693/1‑238 (MQ=255)
tGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGAGGGTTTGATTTTGTCGAAATGTCGGTGGAGGAAACCGCAGAACGGTCCT‑CCCGTC‑TGGCCGGTGGGCGCGCAAAAAG‑GAATTCGGTGGTTGCCGCAAGGAACGGACAAGGGGTTGGGac > 1:746009/1‑237 (MQ=255)
ccgttcttGGGGGGGTGCGCGTTTGTAACCACTTGTTTGGGATTTATGGAAAAGCGATGGCGAACAGTTTCTCCGTGGCGGGGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAACCCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGAtgtg < 1:539043/231‑1 (MQ=255)
agatATCGGGGGAGGTGCGCGTTCGTAATCATGAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑AACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGAtgtg < 2:131999/235‑1 (MQ=255)
gCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGTTGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGcc < 2:810071/239‑1 (MQ=255)
agaTCTGGGGGGGTGCGCGTGCGTAATCACCAGTTAGGGATTTATAAAAAGGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGcc < 1:621595/236‑1 (MQ=255)
tGGGGAGGTGCGCGGGCGGAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCg < 2:797845/239‑1 (MQ=255)
ggAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGGGGCTGAAACCGACGAACGGCTCG‑CACGTCTTGACTGGAGCGC‑CGCACAAAC‑GACTTTCCTGGTTGCCGCGCTGATCGAAACAGGGGTTTGGATCCCCTCGTAGGGCCCTTCCGcac > 1:270396/1‑239 (MQ=255)
ggTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAAAGGCTCT‑CACGTCTTGACTGGGACGC‑CGCCCAAAG‑GAATTCGCCGGGTGCCCCGCGTATGTAAACAGCGGTGGGGACCCCgcccggggggctggccacacacc > 1:1137533/1‑217 (MQ=255)
gTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGACCGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGGTGATCGAAACAGGGGTTGGGAACCCGTCCATGTGCCTTTCCCCACAtc > 2:1319293/1‑238 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGGAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAACTGCGGATTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCGCT‑CCCGTCTTTACTGGAGCGC‑CGGACAAAG‑GAGATAGCAGGTTGCCCCGATGATCGTAAACGGGGGTGGGAACCCGCCGATGGGCCTGCCCGcaaactgt > 1:554157/1‑233 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGTTGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GGATTCCCCGGTTGCCCCGCTTACCGGAACAGGGGTTGGGATCCCGTCGGGGGGCCTGGcccgaaatggg > 1:1312059/1‑230 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGCAACAGGGGTTGGGATCCCGTCGATGTGCCTGTCCGCACAtcg > 2:281266/1‑238 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTCGATGTGCCTGTCCGCACCtcg > 2:1277391/1‑238 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGCCGATGTGCCTGTCCGcaca > 2:621595/1‑235 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGACGGTGGATGAAACCGACGAACCGCTCT‑CACGTCTTGGATGGAGCGC‑GGCCCCAAG‑GAGTTGCCTGGTTGCCCCGATGACTGAAACAGGGGTTGGGAACCCGGCGagtggccctgtcgcaccacac > 1:838343/1‑219 (MQ=255)
tGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGGCGAAATGTCGGGGGATGCAACCGACGAACGGCTCT‑CAGCGCTTGACTGGAGGGC‑CGCACAACGAGAC‑TCCCTGGTTGCCGCGATGCGTGCAACAGGGGGTGGGATCCCGTCGAGGTGCCTGTCCCCCCAtcgc > 1:282786/1‑238 (MQ=255)
gcccgtgcgtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTTTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACAtcgt < 2:554157/235‑1 (MQ=255)
cgtgcgtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGCAAGATCTCTCCTGGCCGGAGCGGCTGGGGCTTGCAAAAACCTGCGGTTTTGATTTTGTCGAAATGTCGGGGGCGGAAACCGCAGCACGGCTCTGCACG‑CTTGACTGGAGGCC‑CGCCCAAAG‑GACTTCACCGCTTGCCGCGCAGTTCAGAACCGGGGTCGGGGTCCCCTCAGTTGGCCTGTGCGCCCATCGTCGca > 1:1035899/1‑238 (MQ=255)
cgtgcgtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGCCTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACACCGTCGCt > 2:40934/1‑239 (MQ=255)
cgtgcgtAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGc < 2:974462/238‑1 (MQ=255)
tAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGGTGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGCGCGC‑CGCGCAAAG‑GGATTCCATGGTTGCCGCGACGTTCGAAACAGGGGGTTGGAACCCGCGCATGTGCCTGTCCGCCCACCGCCGCctttc > 1:974462/1‑235 (MQ=255)
catccGTTAGGGATTTATGAAAAAGCGCTGGGGAAAGCTCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGGCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTgg < 1:928693/239‑1 (MQ=255)
catcaGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTgg < 2:1108045/239‑1 (MQ=255)
aggtAGGGATTTATGAAAAAGCGCTGGCGAAAGATCCCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGc < 2:963493/236‑1 (MQ=255)
aGTTAGGGATTTATGAAAAAGCGTTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGc < 2:437670/239‑1 (MQ=255)
aGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGGCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGc < 2:730491/239‑1 (MQ=255)
gggATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGGACGGCTCT‑AACGTCTTGACTGGAGTCC‑CGTCAAAAG‑GACTTCGCTGGTCTCCCCCATGATCGAAACAGGGGGTGGGACGCCCACCGTGTGCCCTTCCCCCCCACGCCCGTTTCCCTTTTGTAGCCGTGa > 1:1043550/1‑239 (MQ=255)
gggATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GCCTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGa > 2:403362/1‑239 (MQ=255)
ggATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTCTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGAc > 2:912822/1‑239 (MQ=255)
ttATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGGGG‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGGTAGGAACCCGTCGATGGGCCTGTCCGCACAACCGCGCTTTCCCTTTGGTAACCGGGAcaggg > 1:1232156/1‑235 (MQ=255)
ttAGGAAAAAGCGCTGGCGAAAGATCTCCCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGGCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAgg < 2:1000028/239‑1 (MQ=255)
taggAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGGGCGGCTGGTGCTGGAAAAAAGCTGCGGTTTTGATTTTGGCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTTCCGCGATGATCGAAACCGGTGTTGGGATCCCGCCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAgg < 2:1033443/235‑1 (MQ=255)
aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGGTGAAACCGACGACAGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCCCCAAG‑GAATTCGCTGTTTGCCCCCAGGATGGCAACAGGGGGTGGGATCCCCTCGCGTTGCCCGCCCCCCCCTCTCCGCTTTcccctgtttaccccggacagggca > 1:963440/1‑218 (MQ=255)
aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGGTGAAACCGACGAAAGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GCCTTCGCCGGTTGCCGCGCGTATCGCAAACGGGGTTGGGATCCCGTCAAGGTTCCTTTCCGCACATCGTCGCTTTCCCTTTGTTAACCGGGagagggca > 1:885016/1‑232 (MQ=255)
aTGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGGGG‑Ca > 2:1017076/1‑239 (MQ=255)
cTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTTGCTGGAGCGC‑CGCACCACG‑GACTTTCCTGGTTGCCGCGCTGATCGACACCGGTGTTGGGTCTCCTTCGATGTGCTCGTCCGCCAACCGTCCCTTTCTCCGTGTTAGCCGGGATGGGG‑cgggggccacacg > 1:842584/1‑227 (MQ=255)
gCGAAAGATCCCGCCTGGCCGGAGCGGCTGGTGGTGGCAAAAATCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACggg < 2:953755/238‑1 (MQ=255)
cGAAAGGTCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGgc < 2:270396/238‑1 (MQ=255)
cGAAAGATCTCGCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGgc < 2:690444/238‑1 (MQ=255)
gAAAGTTCTCTCTTGGCGGGGGGGGGTGGGGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAACCCGACGACCGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGgcg < 1:547582/238‑1 (MQ=255)
agtcttcgccTGGCCGGAGGGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCggg < 1:1017076/231‑1 (MQ=255)
aGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGCGTTGGGATCCCGTCGATGTGCCTGTCAGCACCACGTCGATTTCCCTTTGGTAGCCGTGACGGTG‑CAGGTTGCGAACGGgccgggg > 2:834261/1‑234 (MQ=255)
aTCTCCCCTGGCCGGAGCGGGTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGaa < 2:1095199/239‑1 (MQ=255)
tctcCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGTGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGCCGAGG‑CAGGGCGCGAACGGGCGCGGGAAATc > 2:47433/1‑239 (MQ=255)
tctcCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGGCGAAATGTCGGTGGATGAAACCGACGAACGGGTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATc < 2:71873/239‑1 (MQ=255)
gccgggCCGGTGCGGCTTGGGCGGGAAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATTAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCAt < 2:843111/235‑1 (MQ=255)
gCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCCCATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CCGTGCGCGAACGGGCGCGGGAAATCATGAGTa > 2:1316031/1‑239 (MQ=255)
gCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTCGATGTGCCCTTCCGCCAACTGTCCCTTTCCCTTTGGTAGCCAGGTAGCGGACAGCG‑GCGAAAGGGCGCGGGGAAACATgggga > 1:631495/1‑235 (MQ=255)
gCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGCGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGGGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTa > 2:957446/1‑239 (MQ=255)
gggggcggggtgggggtgCAAAACGCTGCGGTTTGGGTTTTGGCGAAATGGTGGTGGAGGAAACCGACTAGCGGCCCT‑GACGTCTTGACTGGGGGGC‑TGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCGGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑TAGTGCGCGAACGGGCGCGGGAAATCATGAGTaa < 1:937987/221‑1 (MQ=255)
aGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGAGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGAGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCg > 2:69971/1‑239 (MQ=255)
gCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGCTGACACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CTCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCGTGCCGCACATCGCAGCTTTCCCTTTGGCACCCGTGCCGAGC‑ACGGCCCCGAACGGTCCCTGGAAATCTTGGGCAAAGCGAC‑Tccgtcggcgcc > 1:676497/1‑229 (MQ=255)
gCAAAAAGCTGCGGTTATGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCGCAAAG‑GACTTCGCTGGGTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGGGG‑CAGTGCCCGACCGGGCGCGGGAAATCAGGAGTAAAAGGAT‑TCGCCGGgggcc > 1:1070230/1‑238 (MQ=255)
cataacggtgtgtgtttGATTTTGTCGAAATGTCGGGGGATGAACCCGGCGAACGGCTTT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTGCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGgcgcg < 2:1232156/224‑1 (MQ=255)
aaGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGACCGGGGCCGGGAAATCACGGGGAAAGCGAT‑TCCCCTGGGGCGCGac > 1:103812/1‑237 (MQ=255)
aaGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGAt > 2:188425/1‑238 (MQ=255)
tgggggtttGATTTTGTCAAAATGTCGGTGGATGAACCCGGCGAACGGCTCT‑CCCGTCTTGACTGGAGGGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGAtctc < 2:963440/231‑1 (MQ=255)
tGCGGTTTTTATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGAtctc < 2:1173642/237‑1 (MQ=255)
gtgTTTTTGTTTTGTCGAAATGGGGGTGGATGAAACCGCCGAACGGGTCT‑CACGTTTTGACTGGAGCGC‑CGCACAAAG‑GACTGAGTTGGTTGCCGCGATGATCGAAACAGGGGTTGGGATCGCGTCGATGTGCCTGTCCGCACATCGGCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCa < 1:1319293/237‑1 (MQ=255)
gTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGGGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCCTGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCACCCa > 2:668562/1‑239 (MQ=255)
aTGTCGGTGGATGAAACCGGCGAACGGCTCT‑CACGTCTTGACTGGGGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGGTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGc < 2:711305/239‑1 (MQ=255)
aTGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGc < 2:103812/239‑1 (MQ=255)
aTGGCGGGGGATGAAACCACCGAACGGTCTT‑CCCCTCGTGCCAGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGGCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGGGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGc < 1:1277391/239‑1 (MQ=255)
cGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGAATGGAGCGC‑CGCCCAAAG‑GACTTCGCTGGTTGCCGCGCTGATCGAAACAGGCGTTGGGATCCCGTCGATGTGCCTGTCCGCAACTCGTCGCTGTCCCTTTGGTGTCAGTGACGAGG‑ACGTGGGCGAACGGGCGCGGGAAATCAGCATTAAAGGAAT‑TCGCCTGGCCCGAGTACCCGAGATTCGCCCCCTCCAGCCGCCAGGt > 1:272956/1‑239 (MQ=255)
gATGAAACCGGCGAACGGCTCT‑CACGGCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATg < 2:1312059/238‑1 (MQ=255)
gATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGAACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATg < 2:838343/238‑1 (MQ=255)
tGAAACCTACGGACGGCTGT‑CCCGTTTTGAGTGGGGCGG‑CGCACAAAG‑GGCTTTGCTGGTTGCCGCGATGAGCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGGCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGAc < 1:188425/238‑1 (MQ=255)
tGAAACCGAAGGACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGAc < 2:477133/238‑1 (MQ=255)
gtcaaCCGTCGAACGGCTCT‑CCCGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGGTGGTTGCCGCGATGATCGAAACCGGTGTTGGGATCCCGTCGATGGGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGAc < 1:957446/235‑1 (MQ=255)
ataaaccggccgaaggCTCC‑CACGGTTTGGCTGGAGCGC‑CGCACAAAG‑GACCTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGAc < 2:192338/224‑1 (MQ=255)
aaaCCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGa > 1:1172852/1‑183 (MQ=255)
aaaCCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGa < 2:1172852/183‑1 (MQ=255)
aCCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTa < 2:885016/239‑1 (MQ=255)
cgacgaACAGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGCTCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTGTGTACCCTGGACGCGG‑CGGCGCGCGAACGGGCCCGGGAAACAGTGAG‑AAAGAGCTGTGGCCTCGAGCTCGTTCCCGCCATTCCCACCACCACCCTGGCAGGGTAtaatgcctgta > 1:703464/1‑229 (MQ=255)
ggaCGGCTCT‑CACGTCTTGAGTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACg < 2:1043550/236‑1 (MQ=255)
cGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCCCCATCCAGCTGGCAGGTTAGGACGTCCAttcccacga > 1:782405/1‑232 (MQ=255)
gtgtatgggactgtggcTGGAGCGG‑CGCACAAAG‑TCCTTCGCGGGTGGCCGCGATGACCGAAACAGGGGTGGGTATGCGGCGGAGTGGCCTGTCCGCAAATCGTCGCTTTCCCGTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATTATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGAc < 1:847458/223‑1 (MQ=255)
tGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGGCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCa < 2:1137533/239‑1 (MQ=255)
tGACTGGAGCGC‑CGCACAAAG‑GACTTCGCGGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCa < 2:19437/239‑1 (MQ=255)
aGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACCGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCTTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGCGCGCGAACGGGCGCGGGAATGCCTGAGTAAAAGGAT‑TCGCCGTGCGCGCGATCTCGGCATTCGTACCACCCAGCTGGACGGTTATAACACGTATTACGAAAACCACGACGAAGCCACCAggaa > 1:1011413/1‑237 (MQ=255)
aGCGC‑CGCAAAAAG‑GGCTTCGGTGGTTGCCGCGATGATCGAAACAGGTGGTGGGATCCCGGCGATGTGCCTGTCCGAACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGc < 2:782405/238‑1 (MQ=255)
cgcCCAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGtt < 2:631495/239‑1 (MQ=255)
cgcACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGC‑CAGTGCGCGAACGTGCGCGGGAAATCATGGGTAAAGCGAT‑TCGCCTGGCGCGCGCTCCCGGCATTCGCCCCAACCAGCAGGCAGGTTATGACAGCTATATCGAAGACACcgacgacacaaccccgcaaaggg > 1:789554/1‑222 (MQ=255)
aaG‑GGCTTCGCGCGGTGCCGCGATTGCCGAACCAGGTGTTGGGATCCCGTCGATGTGCCTGGCCGCACATCGTCTCTGTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTg < 2:875943/239‑1 (MQ=255)
aaG‑GACTTCGCTTGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGGCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTTGCGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTg < 2:1083159/239‑1 (MQ=255)
ttCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCCCAACAAAAGCACCCGGCAAGGGTTTGGTGAAAGGc > 1:1196418/1‑239 (MQ=255)
ttCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAggg < 2:1106008/238‑1 (MQ=255)
ttCGCTGGGTGCCGCGATGATCGAAACGGGGGTTGGGATCCCGTCGGTGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAggg < 2:550238/238‑1 (MQ=255)
ctgccttgTTCCCGGGATGATCGAAACGGGTGTTGGGATCCCGTCGATGTGCCTGGCCGCACATCGTCGGTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAggg < 2:282786/231‑1 (MQ=255)
tCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGcg > 2:1042132/1‑238 (MQ=255)
cgcgGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACg < 1:865879/195‑1 (MQ=255)
cGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACg > 2:865879/1‑195 (MQ=255)
tGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACACCGACGAAGGCACCCGGCAAGTTTTTCCTGAAGGGCTgggg > 2:492810/1‑237 (MQ=255)
gCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGc > 2:476496/1‑239 (MQ=255)
cgcgATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGCa > 2:634987/1‑238 (MQ=255)
aaaCGGGTGTTGGGAGCCCGTGGTTGGGCCTTCCCGACCATCGGTGGGTTCCCTTGGGTAGCCGGGACGAGG‑CAGGGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGCAGTCGAACAggc < 1:14092/238‑1 (MQ=255)
gtgtTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGCCGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGAAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCCCCATCCAGCTGGCAGGTTATGACCGCTATTACGAAGCACACCCCAAACGCACCCGCCACCGTTTTGATGAAGGGCTGGGCGAGGCAGGCGAAAAggcggcggc > 1:855255/1‑238 (MQ=255)
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TTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCT‑CACGTCTTGACTGGAGCGC‑CGCACAAAG‑GACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGG‑CAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGAT‑TCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGCAGTCGAACAGGCGGCGGC > NC_000913/3749193‑3749664
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
