Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F2 I0 R1 88 153.3 2661736 98.2% 2613824 271.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,466,729 G→A 6.2% pseudogene (1338/2513 nt) ydbA → pseudogene, autotransporter homolog, interrupted by IS2 and IS30

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,466,7290GA 6.2% 290.7 / 5.3 104pseudogene (1338/2513 nt)ydbApseudogene, autotransporter homolog, interrupted by IS2 and IS30
Reads supporting (aligned to +/- strand):  ref base G (60/34);  new base A (2/5);  total (63/41)
Fisher's exact test for biased strand distribution p-value = 1.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 106 total aligned reads displayed.

CGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAAT  >  NC_000913/1466447‑1467014
                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                              
cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAATAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATTAACGGTAATGACGCCACGGCGAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACGGGTACCGAAATTGCTGGCAATAACGGGAAGGtaaa                                                                                                                                                                                                                                                                                           >  2:1220857/1‑285 (MQ=255)
cGGCGATCTGGATGCCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCGTTGTAAATAACGAAGGCGAGAGCGCTATCACCAATGGAGGCACCGGCACGCAGATAAACGGTAATGACGCCACAGCGAACAACAGCGGCAAAACCACCGTTGATGGCAACGATTCCACGGGTACGAAACTCGCTGGCAATAACGGCAAGGtaaat                                                                                                                                                                                                                                                                                          >  2:1135113/1‑285 (MQ=11)
                                  gtcgaaacaaCCGGCGAAGGCGCAACGATAGAGAAAAAGGCCACCATCACCGCAGCCGATCTGGAGTACACGGATAGCCAGGTTGACGGTGAACGGGCGGTCGTCAAAAACGAAGGCGAGAGCCCCATCACCAACGGTGGCACCGGCACGCAGCGTAACGGTGATGACGCCACGGCAAACAACAACGGCAAATCCACCGTGTACGGCGAGGACTACACAGGTACACAAATGGCGTGTCATCGCGAGAGTGTGATTCATATAGGAGATAGGGATGTCAGCGGCGGCGGTc                                                                                                                                                                                                                                                        <  2:307275/280‑1 (MQ=255)
                                  aTTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGt                                                                                                                                                                                                                                                         <  1:93091/288‑1 (MQ=255)
                                   ttGATATCACCGGCGAAAGCGAAACGGTGGATAACAAGGGCGCCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa                                                                                                                                                                                                                                                       <  1:598666/289‑1 (MQ=255)
                                   ttGATAGCACCGGCGACATCGCAACGGTGGATATCAATGGCACCAGGACCGTAACCGATCCTGAGTCCATCGGTATCCAGGGTGACGGCGACCAGGCGGTTGTAAAAAACGAAGGCACGGGCGCCATCACGCACGGTGGCACCGACACGCAGATTATCGGCGAGGAGGCTCGTGCGAACAGCAAGGGGAATACCACCGACGGCGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGAAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa                                                                                                                                                                                                                                                       <  2:651676/289‑1 (MQ=17)
                                         tCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAATGGTGGCACCGGCACGCAGATCAACGGTAATGACGCCACGGCAAACAACAACGGCAAAACTACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCAATCTGGATGTCAGAGGCGGCGCGCACGGTAt                                                                                                                                                                                                                                                 >  1:761535/1‑289 (MQ=255)
                                           aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCGCCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg                                                                                                                                                                                                                                                                                  >  1:41621/1‑254 (MQ=255)
                                           aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCGCCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACgg                                                                                                                                                                                                                                                                                  <  2:41621/254‑1 (MQ=255)
                                           aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCTATCTGGATGTCAGCGGCGGCGGTCACGGTATTg                                                                                                                                                                                                                                               >  1:519353/1‑289 (MQ=255)
                                           aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCAAGGTATTg                                                                                                                                                                                                                                               >  1:1106527/1‑289 (MQ=255)
                                           aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATAGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCTCTCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACCACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCTCCGGATGTCAGCGGCGGCGGGCACGGTATTg                                                                                                                                                                                                                                               >  2:93091/1‑289 (MQ=255)
                                             cGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCAGTTGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATCAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGATGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGATGGTGATTCAGGACCACGGTCTGGATGTTAGCGGCGGCGGGCACGCTGTTGag                                                                                                                                                                                                                                             >  1:292419/1‑288 (MQ=17)
                                              ggtgACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGAACCGGAGTCCATTGGTATCCAGGTTGACGGTGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGata                                                                                                                                                                                                                                            <  1:463972/286‑1 (MQ=255)
                                                cGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGCTTGACGGCGACCAGGCGGTTGTCAACAACGAAGGCGAGAGCACCATCACCAATGGCGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGAAAGGATTCCACCGGTACGGCAATTGCAGGACATATCGGTAATGTCCATCACGCAGGCAACCTGATTGTCCAGGGCGGCGGTCACGTTAttcaatcg                                                                                                                                                                                                                                          >  2:777664/1‑283 (MQ=14)
                                                                 atgaccagggacccATGACCGTCACCGATCCGGAGTCCATCGGTATCAAGGTGGACGGCGAACAGGCGATCGTTAACAACGAAGGCGAGAGCCCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTATTGACGCCACGGCAAACAACAACGGCAAAACCACCGTGTACGGCAAGGATGCCACCGGTACGGACATGACTGGCAAGAACGGTAACGTGGGCAACGACAGCGGTCTAGAAGTGACAGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCaa                                                                                                                                                                                                                          <  2:911405/276‑1 (MQ=14)
                                                                 aTAACCAGGACACCATAACCGTCACCGATCCGGGGTCCATGGGTAGCCAGATTGACGGGGACCAGGCGTTTGTTAACAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCAACCAGATTAACGGTGAGGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGTAATAACGGGAAGGTGATTCAGGACGGCGATCTGGTTGTCGGCGGCGGCGGTCGCGGTATTGATATCACCGGCGACAGCGCaa                                                                                                                                                                                                                          <  2:380603/288‑1 (MQ=14)
                                                                     cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTAGCAAGGTTGACGGCGACCAGGCGGTCGTGAACAACGAAGCCGAGAGCGCCATCACCAACGGTTGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATGGATATCACCGGCGACAGCGCAACGGTg                                                                                                                                                                                                                     <  1:616891/289‑1 (MQ=255)
                                                                        gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGATAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGAAATAACGGGAAGGTTATTCAGGACGGAGATCTGGATGTCAGCGACGGCGGACACGGTATTGATAGCACAGGTGACAGCGCAACGGTggct                                                                                                                                                                                                                  >  1:786997/1‑287 (MQ=17)
                                                                        gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGt                                                                                                                                                                                                                                                   <  1:143806/256‑1 (MQ=255)
                                                                        gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAAc                                                                                                                                                                                                                         <  1:259914/282‑1 (MQ=255)
                                                                        gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAAc                                                                                                                                                                                                                         >  2:259914/1‑282 (MQ=255)
                                                                        gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGt                                                                                                                                                                                                                                                   >  2:143806/1‑256 (MQ=255)
                                                                        gggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGAATGATATCACCGGCGACAGCGCAACGGTggct                                                                                                                                                                                                                  >  1:429381/1‑287 (MQ=255)
                                                                         ggCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGt                                                                                                                                                                                                                                                         <  1:1200832/249‑1 (MQ=255)
                                                                          gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGTTTGACGGCGACCAGGCCATCGTTAACAACGAAGGCGAGAGCGCTATCAGTCTCGCATACACCGCTAACCCTACTGACGGTGATGACGCCACGGAAAACAACTTCGGCAATACCACCGTAGACGGCAAGGATTCCACCGGCACGGAAATTGCTGGCAATAACGGGAAGTTGCTACAGGACGCCGAACTGAATGTGATAGGCGTCGGCCCCGGAATTGGTATCCCAGGCgctagcacgatgtggtatg                                                                                                                                                                                                                 >  2:957898/1‑270 (MQ=9)
                                                                          gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg                                                                                                                                                                                                                                                             <  2:782436/244‑1 (MQ=255)
                                                                          gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg                                                                                                                                                                                                                                                             >  1:782436/1‑244 (MQ=255)
                                                                              cgataCCGACCCCGATCGGATGTCGATCGGTATCCAGTTGTAAGGGGACCAGGCAGTTGGTAACACCGAAGTGGAGAGCACCATAACCAACGGTGGCACCGTGACGCATATGAGAGTTGATGACGCCACGGCAAACAACAACGACAAAACCACCGTTGACGGCAAGGATGCCACTGTTACGGAAATTGCTGGCAATAAGGGGAAGATGAGTCAGGACGGCGACATGGATGTCAGCGTCGGAGGGCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAg                                                                                                                                                                                                            <  2:1224415/285‑1 (MQ=9)
                                                                               aTGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGACGGCGATCTGGCTGTCAGCGGCGGTGGTCACGGTATTGATATCATCGGCGACAGCGCAACGGTGGACAACAAgg                                                                                                                                                                                                           >  1:539512/1‑289 (MQ=255)
                                                                                tGACCGTCACCGATCCGGAGTCCATGTGTATCCAGCTTGACGGCGACCAGGCGGTCGTTAACAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGATGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAggg                                                                                                                                                                                                          <  1:1048865/289‑1 (MQ=255)
                                                                                            aTCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGAAAACAAGGGCACCATGACCg                                                                                                                                                                                               >  1:1003224/1‑288 (MQ=255)
                                                                                                  aGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAgg                                                                                                                                                                                                                                                                                               <  2:922362/186‑1 (MQ=255)
                                                                                                  aGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAgg                                                                                                                                                                                                                                                                                               >  1:922362/1‑186 (MQ=255)
                                                                                                    tCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATTAACGGTGATGACGCCACCGCAAACAACAACGGAAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGCAAATTGCTGGCAATAACGGCATGGTGATTCATGACGGCAAACTGCATGTCCGCGGCGGCGGTCACGGTGTTGATATCACCGGCGACCGCCCAACGGTTGAAACGAAGGGCACCATGCCCGTACCCGAt                                                                                                                                                                                       >  2:1182691/1‑288 (MQ=17)
                                                                                                            tATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa                                                                                                                                                                                                                                                       <  1:775780/216‑1 (MQ=255)
                                                                                                                      gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACGGGTACGAAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGAGCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGAGCAACGGTGGATAACAAGGGCACCATGACTGTACCCGATCCGGAGTCAATCGGTGTca                                                                                                                                                                    >  2:717879/1‑288 (MQ=255)
                                                                                                                        cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc                                                                                                                                                                                                                                                                             >  1:321159/1‑182 (MQ=255)
                                                                                                                        cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATc                                                                                                                                                                                                                                                                             <  2:321159/182‑1 (MQ=255)
                                                                                                                        cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCATCATGACCGTCCACGATCCGGAGTCCATCGGTATCCAg                                                                                                                                                                  >  1:665178/1‑289 (MQ=255)
                                                                                                                                  gCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCCGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGCCCATCGGTAGCCAGATTGACGTCg                                                                                                                                                        >  1:929176/1‑289 (MQ=255)
                                                                                                                                              aacGAAGGCGAGGGCGCCATCACCAACGGTGGAACCGGCACGCAGATGAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGAAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGAcc                                                                                                                                                     <  2:560384/280‑1 (MQ=255)
                                                                                                                                                cGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCTCTGGATGTCAGCGGCGGAGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTTGATAACAAGGGCACTATTACCGTCACCGATCCGGAGCTCATCGGTACCCAGATTGCTGCCGACCAGGCCCTCGtt                                                                                                                                          >  2:870344/1‑288 (MQ=14)
                                                                                                                                                cGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTAACCGATACGGAGTCCATCGGTATCCAGATTGACGACTACCAGACCAACGTc                                                                                                                                          >  1:101300/1‑289 (MQ=255)
                                                                                                                                                   aGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAGCGGCAAAACCACCGTAGACGGCAAGGATTCCACCGATACGGAACTTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGTTGTCCGTGTTGGCGGTCAAGGTATTGATATCACCGGCGACAGCACCACGGTGGTTAACAAGGGAACGAGGACGGTCGACGGACCGGAGTCCAGCGGAACCCAGATGGACGGCGACCCGGCCCTCGTAAAt                                                                                                                                       >  2:626714/1‑289 (MQ=255)
                                                                                                                                                   aGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTACATCGGTATc                                                                                                                                                                     >  1:707308/1‑259 (MQ=255)
                                                                                                                                                        agagCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGa                                                                                                                                  >  2:260705/1‑289 (MQ=255)
                                                                                                                                                           gcgcCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGCGACCATCGGTGTCCAGATTGACGGCGACCAGGCCATCGTCAATAACGCAgg                                                                                                                               >  2:1310898/1‑289 (MQ=255)
                                                                                                                                                            cgcCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTACATCGGTATCCAGCTTTACGGCGACCAGGCCATCGTCAATAACGAAgga                                                                                                                              >  1:182554/1‑288 (MQ=255)
                                                                                                                                                             gcCATCAACAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGGATTGATATCACCGGCGACATCGCAACGATGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGc                                                                                                                              <  1:957898/288‑1 (MQ=255)
                                                                                                                                                                     cAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACt                                                                                                                     <  1:588024/289‑1 (MQ=255)
                                                                                                                                                                             gCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCaa                                                                                                             >  1:496758/1‑289 (MQ=255)
                                                                                                                                                                             gCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACAGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATGGACGGCGACCAGGCCAACCTAAATAACGAAGGCGGGAGCACAATcaacaa                                                                                                             >  2:1214243/1‑289 (MQ=255)
                                                                                                                                                                               aCCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGAGACCAGGCCATCGGCAATCACGAAGGCAAAAGAACTAACACCaacg                                                                                                           >  2:471779/1‑287 (MQ=255)
                                                                                                                                                                                 cGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATAGTCAATAACGAAGGCGAGAGCACTATCACCAATggc                                                                                                         >  1:803480/1‑289 (MQ=255)
                                                                                                                                                                                         aaaTTACCGGGGATGACGCCACGGCCAACAACAACGGCAAAACCACCTGTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGcggcaccg                                                                                                  <  2:654414/286‑1 (MQ=255)
                                                                                                                                                                                            ttAACGGTGATGACGCCACGGCAAACAACAACTGCAAAACCACCGTTGACGGCAAGGATTCCACCGACAAGGAAATGAGTGGTAATGTGGGCAAGGAGATGTGGAAAGGAGATATGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGcggcaccggca                                                                                               <  1:370051/288‑1 (MQ=14)
                                                                                                                                                                                             tAAGGGGGAGGACGCCACGGAAAACAACAAAGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGATGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACt                                                                                             <  2:758140/289‑1 (MQ=255)
                                                                                                                                                                                             tAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACt                                                                                             <  1:671060/289‑1 (MQ=255)
                                                                                                                                                                                             tAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACt                                                                                             <  1:145163/289‑1 (MQ=255)
                                                                                                                                                                                                   tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCga                                                                                                                            <  1:1280819/252‑1 (MQ=255)
                                                                                                                                                                                                   tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCga                                                                                                                            >  2:1280819/1‑252 (MQ=255)
                                                                                                                                                                                                   tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGAt                                                                                        >  1:654414/1‑288 (MQ=255)
                                                                                                                                                                                                   tgatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACAATGACCGTTACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGATCAGGCAAACGCCAATAAAGCAGGGCAAAGCACTATCATCAATGCcggcaccggtcacaaagtc                                                                                       >  2:1234593/1‑279 (MQ=14)
                                                                                                                                                                                                    gatgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATc                                                                                       <  1:260705/288‑1 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGCTTGACGGAGACCAGGCCATCGTCAATCACGAAGGCGACAGCACTACCCCCAATGGCCGCACCTGCACTCatcaca                                                                                      >  2:145163/1‑283 (MQ=17)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGAc                                                                                                                                                            >  2:820320/1‑218 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGAc                                                                                                                                                            <  1:820320/218‑1 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCaa                                                                                     >  1:1036151/1‑289 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCa                                                                                      >  1:461246/1‑288 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCa                                                                                      >  2:664518/1‑288 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGACGCGGCACTCAGATCa                                                                                      >  1:786403/1‑288 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGACCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTAACACCAATGGCGGAACCGGCACCCAGACCaa                                                                                     >  2:229680/1‑289 (MQ=255)
                                                                                                                                                                                                     atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCa                                                                                      >  1:119944/1‑288 (MQ=255)
                                                                                                                                                                                                          gCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTa                                                                                >  2:1254546/1‑289 (MQ=255)
                                                                                                                                                                                                               ggCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCCCCCAGATCAACGGTAacgac                                                                           >  1:1025211/1‑289 (MQ=255)
                                                                                                                                                                                                                   aacaaaaacGGCAAAACCACCGTTGACGGCAATGATTCCACCGTTACGGAAATTGACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTAACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCa                                                                       <  2:863590/289‑1 (MQ=255)
                                                                                                                                                                                                                                aaaCCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAg                                                         >  1:225297/1‑289 (MQ=255)
                                                                                                                                                                                                                                aaaCCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCAAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTAACACCAATGGCGGCACCGGCACCAAGAGCAACGGTAACGAC‑CCACCAGCGACTAACaa                                                         >  2:21611/1‑288 (MQ=17)
                                                                                                                                                                                                                                 aaCCACCGTTGACGGGAAGGATTCAGCCGGTACGCAAATTCCCGGCAAGAACGGGAAGGTGATTCAGGCCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATGGTGTTCACCGGCGAGAGCGCAACGGTGGATAACAACGGCACCATGACCGTCACCGACACGGAGGCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGt                                                        <  2:929176/289‑1 (MQ=17)
                                                                                                                                                                                                                                    caccGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGa                                                     <  2:119944/289‑1 (MQ=255)
                                                                                                                                                                                                                                    caccGTTAACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATAGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGa                                                     <  1:586989/289‑1 (MQ=255)
                                                                                                                                                                                                                                      ccGTTGATGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGAAGCCACC‑GCGAATAACAGTGGaaa                                                   >  1:28163/1‑289 (MQ=14)
                                                                                                                                                                                                                                       cGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGTTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCAt                                                                                                                                              <  2:59539/198‑1 (MQ=255)
                                                                                                                                                                                                                                       cGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGTTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCAt                                                                                                                                              >  1:59539/1‑198 (MQ=255)
                                                                                                                                                                                                                                           gACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCa                                              <  1:242171/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 aaGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTc                                                                                                                                                                                                                                                        >  1:1239867/1‑82 (MQ=255)
                                                                                                                                                                                                                                                 aaGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTc                                                                                                                                                                                                                                                        <  2:1239867/82‑1 (MQ=255)
                                                                                                                                                                                                                                                      ttCCACCGGTAATGAAATCAACGGTAATAACGGTAAAGTGATTCAGGACGGCGATCTGTAAGTCAGCGGCGGCGAGCACTGTATTGCTATCACCGACGACAGCGCGACAGTGGCTAACAAGGGCGCCAAGACCGTCACCGATCCAGAGGCCATCAGTATCCAGATTGGCGGCGACCGGGCCGTCGTCAATAACGAAGGCTAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGa                                   <  2:28163/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       gccACCTGGACGGAATGTGGTGGTAATAACGGTAAAGTGATGAGGGACGGTGATCGGGATGTCAGCGGCGGCTGTCACGGTATTGATATGTCCGGCGACAGCGCAACGGTGGATAACAAGTGCACCATGGCCGCTATCGATCCGGAGTCCATCGTTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGTGAACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGa                                   <  2:981210/287‑1 (MQ=255)
                                                                                                                                                                                                                                                        ccACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGCCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGTCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCCCTGTTGCTGGaaa                                 >  1:1157142/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         caacgttACGGAAATTGCTGGCAATAACGGCAAGGTTGTTCAGGAAGGCGATCTGGATGTCAGCGTCGTAGGTAACGGTTTTGATATGACCGGCGACAGCTCAACAGTTGATAACAAGGTAACCTTGACAGTCACCGATCTGGAGTCAATCGGTATCCAGATTGACGGCGACCAGGCCATCGTGAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGAACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGaaaa                                <  2:665178/283‑1 (MQ=255)
                                                                                                                                                                                                                                                              gTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGAtt                            >  2:1150006/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               tACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACTGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTcc                          >  1:498038/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               tACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCCCC‑CCGAATAACAGTGGAAAAACCACTGGTGATGGAAAAGATTc                           >  2:1227713/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   gAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACgg                      >  1:124148/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aTTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGCTCAACGGTAACGACGCCACC‑GCGAATAACAGTGG‑AAAACCACTGTTGATGGAAAAGATTCCACGGGTAc                  >  2:955847/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         gCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCa                >  1:1251612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             gCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCaaaa             >  1:360797/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                       gAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGACGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAat  >  1:201453/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                              
CGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACC‑GCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAAT  >  NC_000913/1466447‑1467014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A