Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,103,606 |
T→C |
13.4% |
S457G (AGT→GGT) |
cpxA ← |
sensory histidine kinase in two‑component regulatory system with CpxR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,103,606 | 0 | T | C | 13.4%
| 304.1
/ 3.7
| 125 | S457G (AGT→GGT) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR |
| Reads supporting (aligned to +/- strand): ref base T (48/56); new base C (5/16); total (53/72) |
| Fisher's exact test for biased strand distribution p-value = 8.88e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 125 total aligned reads displayed.
TGATGACGATCAATATCACCGTT‑TACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAC > NC_000913/4103369‑4103839
|
ttagtaccgtCAATTTCCCCGTT‑TACTCTCCCGTGCCGGGTTATCGAAAAGTGGGACGCGGACGATGCAAAAGCGCCGAATGGGCGGAAAGGTCGAAGATTTTC‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTc < 2:300844/230‑1 (MQ=255)
agaCGATAAATATCCCCGTTATAC‑CCCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGc < 1:461680/238‑1 (MQ=255)
aTCAATATCACCGTT‑TACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTCCCTGCAAATGCGAAGTTTAACCCCCCTtata > 2:605664/1‑239 (MQ=255)
tatCACCGTT‑TACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCg < 1:630116/239‑1 (MQ=255)
cGTT‑TACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTCCCTGCAAATCCGAAGTTTAACCCCCCTTTTACAACGGCAAcc > 2:966878/1‑239 (MQ=255)
cGTT‑TACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGAGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAAACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGAAGAGGGGGTAAACGCCTTATCCTGCCTGCAAAACCGAAGTTTACCTCCGCTtataagccgccaaca > 2:763031/1‑228 (MQ=255)
tt‑tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGCAGTTTAACTCCGCTTATACAGC‑Gcaaacaaa > 2:283075/1‑239 (MQ=255)
tt‑tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAAACGCTATCAGCGTCGCATCAGGCATCCTGCTCAACTGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATCCGAAGTTTAACTCCGCTTTAACAACGGAAACaaa > 2:162036/1‑239 (MQ=255)
tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAAACGCTATAAGCGTCGCATCAGGCACCCTGCTCAACTGCCGAAGCCGCGGTAAAGGCCTTATCCTGTCTGCAAATGCGAAGTTTAAATCCGCTTATAACACGCCAACCAAAt > 2:701158/1‑239 (MQ=255)
ctgccgccgccgGTTTAGCAAAAAGGGGGACGGGGACGGTGAAAAAGCTCCTACTGAGCCGCAAAATCGAAAATTTTT‑CCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGGAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCTTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 2:207762/236‑1 (MQ=255)
ctcccGCGGCGGGGTTTACGAAAAGCGGGGCGCGGACGGTGCAAAAGCGCAGACTGAGCGGCAAGCTCGAAGCTTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGGGTGTAGGCCTGATAAGCCGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 2:909085/236‑1 (MQ=255)
ccgccGCTGCCGGGTTATCGAAACGCGGGACGCGGACGGTGCAAAAGCGCCGCACGAGCCGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:963771/236‑1 (MQ=39)
ccGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTTTCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATAAAACGGGAACaaaaaaccca > 2:345014/1‑232 (MQ=255)
ccGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGGGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCCTCCTGCTCAAATGCCGGATCGCGCGTAAACGCCTTATCCTCCTTCCAAATGCGAAGTTTAACCCCCCTTTTAAACAGGCAACaaaacaccca > 2:479349/1‑232 (MQ=255)
tGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGTGGGTAGGCCTGCTCAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCCAATGCCAGATGCGGCGACAAGGCCCTATTCTGCCTGCACATGCGCAGTTTAACTCCGCTTAACAAGGGCCAACCaaaaaaccccccgg > 2:694303/1‑228 (MQ=255)
ggtttATCGAAAATGTGGCCCCGGGCGTTG‑AAAGGGGCCGACTGAGCGGCAGAGTGGAAGATTTTC‑CCCGCCGGTTGTGGGGAAAAGAACCCCCGGGGGGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAAcc < 2:484643/236‑1 (MQ=37)
tCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATAAAGCGGCAACCAAAACACCACCCGAAAACCGCCCa > 2:1082443/1‑239 (MQ=255)
tCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCCCTTATACAGCGGCAACCAAATCACCAGCCGCAAACCGccc > 1:98258/1‑238 (MQ=255)
ccaaaagGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCa < 1:728662/236‑1 (MQ=255)
aggtgggACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGTGCGAAGATTTTT‑CCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTTTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCggg < 1:902504/234‑1 (MQ=255)
aaGCGGGGCGGGGACGAGCAAAAAGCCCCGTCTGAGGGCCACGACCG‑AGATTTTTCCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAGGCCGCTATCAGCTGCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCggg < 2:323150/239‑1 (MQ=255)
acctgaccgcgGACAAGGAAAAAGGCCCAACGGGGGGGCAAGATCGAAGATTTTC‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGc < 1:193309/232‑1 (MQ=255)
aGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGc < 1:345014/239‑1 (MQ=255)
aGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAAATCCCCTTATACAGCGGCAACCAAAACACCAACCGTAAACCGCCCACCGGGc > 2:910958/1‑239 (MQ=255)
ggACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCgg > 1:323150/1‑233 (MQ=255)
ccggggcggtgaaaagGCGCCGACTGGGGGGCAAGTTCGAAGTTTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGtctt < 2:111312/226‑1 (MQ=39)
aCGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTTGCTTCGGcc > 1:936612/1‑238 (MQ=255)
cgcCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGGTTAACTCCGCTTATACAGCGGCAACCAAATCACCACCCGTAAACCGCCCACCGGGCTGGCTCCTGCCTTCACCCAAccc > 1:840940/1‑237 (MQ=255)
gcgggcTGGGCGGCAGGAGCGAAGTTTTTT‑CCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCGGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCa < 2:261463/232‑1 (MQ=255)
cgcgtggAGCGGCAATATCGGAGTTTTTT‑CCAGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGCCGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACTCCGCTGATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 2:411536/233‑1 (MQ=255)
ccGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTACACCCCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa > 1:1054681/1‑239 (MQ=255)
ccGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACg > 1:261463/1‑238 (MQ=255)
ccGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAACGGCAACCAAATAACCAGCCGTAAACAGCCCACCGGGGTGTCTTCTTCCTTAACCCAACCAcc > 2:685373/1‑237 (MQ=39)
ccGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGACTTATCCTGCCTGCACAGGCGAAGTTTAACTCCGCTTATAACGCCGCCACCAAATCACCCGCCGTAAACCGCACACCGGCCTGTCTTTTGCCTTccccacaccaca > 2:812512/1‑230 (MQ=255)
ggACTGAGGGGCAAATGCGAAGATTTTC‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 1:334844/237‑1 (MQ=255)
cGACTGGGCGGCAATGTCGAAGTTTTTT‑CCCGCCGGTTGGGGGGAAAATAACCCCCGGAGGGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 1:414982/238‑1 (MQ=255)
taggggacAAGACCGAAGTTTTTG‑CCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGAtgctg < 1:694303/232‑1 (MQ=255)
ttttt‑CCGGCGGGTGGGGGGGAAAAAAAGCCCCGGGGTGGAGGCCGGATACGGCCGTAAGGCCGTTGGATCAGGCACGCAGCTAAAATGCCGGAGCCGGGTTAACCGCCTTACCCTGCCTGCAAATGCGAAGTGTAACCCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGGGGGCTGTCGTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTcaaca < 2:676579/239‑1 (MQ=255)
ttttt‑CCGGCCGGTTGGGGGGAAAACTACCCCCGGAGTGTAGGCATGAAAAGCCGCTATCATCGTCGCATCAGGCTTCCTGCTCAAATGCCGGATGCGGCGAAACCGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTcaaca < 1:1072034/239‑1 (MQ=255)
ttt‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCAAGCCACGATGCTGCTGAA‑TGGCGGGTTtaaaaa > 2:59780/1‑238 (MQ=255)
tt‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGCAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCACCGGCCGGTCTTCTGCCTTCCCCCACCCACAATGTGGCTGAAGGGGGGGTTTcaaaac > 2:673477/1‑235 (MQ=38)
ccgccgGTTGTGGGAAAAATAACCCCCGGAGGTGAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGcc < 1:81751/239‑1 (MQ=255)
ggTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCACCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTTACCAAACCCCAG‑cc > 1:616874/1‑238 (MQ=255)
ggTTGGGGGAAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑ccc < 1:599506/239‑1 (MQ=255)
aaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGGTTTAAAAAACCCCAG‑CCCCAAA‑cccttcc > 2:209414/1‑233 (MQ=255)
ttaccccccGGAGTGTGGGCTTGAAACGGCGTTTTCGGGGTCGCATCAGGCTTCCTGCTAAAGTGCGGGATGCGGCGTAACCCCTTTACCCTGCCTGAAATTGCCAAGTTTAACCCCCTTTAGACAGCGGCAACCAAACCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCg < 2:1045245/235‑1 (MQ=255)
aaCCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGcc < 1:98604/239‑1 (MQ=255)
aaCCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAAGGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGcc < 1:605664/239‑1 (MQ=255)
aaCCCCCGGAGTGTAGGCCTGATAAGACGCTACCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGcc < 1:528877/239‑1 (MQ=255)
aaCCCCCGGAGTGCAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAACCGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGcc < 1:222692/239‑1 (MQ=255)
aaCCCCCGGAGGGTAGGCCTGATAAGACGCTAGCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGcc < 1:77139/239‑1 (MQ=255)
ggtgtgtAGGCATGATAAGACGCTAACAGCGTCCCCGCAGGCCTCCTCCTCAAATGCCGGATGCGGCGTAAACGCCTTACCCTGCCTGCAAATGCGAATTTTAACCCCGTTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCa < 2:713972/236‑1 (MQ=255)
gAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTTAACAAACGCCCG‑CCCCAAA‑CCTGT‑ACCCCCAGATTCAc > 1:389439/1‑239 (MQ=255)
tgtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCggg < 1:1035183/151‑1 (MQ=255)
cTGATAAGCCGCTATCGGCGTCGCATCAGGCATCCTGCCCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATCCAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTg < 1:359713/238‑1 (MQ=255)
tGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGGTTCAACAAACGCCAG‑CCCCAAA‑CCCGT‑CACGCCCGGTTACCGCTcgcgggtt > 1:26268/1‑235 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAC‑TGGCGGGTTCAAAAAACGCCAC‑CCCCCAA‑ACACG‑ACCGCCCCATTCACGATccgcgcgct > 2:38474/1‑230 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCACCAATCCCCCG‑CCCCCAA‑CCCGC‑ACCCCCAAATTCACGATccccagctcc > 2:83261/1‑230 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCCAA‑CCTGT‑AACCCCAGATTAAccactccgtgct > 1:630377/1‑226 (MQ=255)
aTAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCCAA‑ACTGT‑AACCCCAGATTCACGAACCCGGGCttt > 1:685308/1‑238 (MQ=255)
aaaGACGTTATCACGGCCGCATCAGGCATCCTGCCCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTc < 1:389254/237‑1 (MQ=255)
aaGACGCTAACAGCGTCGCATCAGGAATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCAt < 1:703986/239‑1 (MQ=255)
aCGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCCG‑CCCCAAA‑CCCGTAACCGCCA‑ATTCACGATGCCGGGGTTCATCgg > 1:644749/1‑239 (MQ=255)
aCGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCGGCCTTAACCCAGCCACGCTGCTGCTGAA‑TGGGGGTTTCCACAACCCCCAG‑CCCCCAA‑CCCGT‑CCCCCCAAGTTTACCATcgcgggtctccccgg > 2:985940/1‑228 (MQ=255)
agCTATCAGCTTCGCAGTAGGCATCCTGCGCAAAGGCCGGAAGGGGCCTAAACGCCTTATCCTGCCTGCAAAGGCGAAGTTTAACTCCGCTTCTACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCgg < 1:1071091/237‑1 (MQ=255)
aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCggg > 2:436969/1‑131 (MQ=255)
aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCggg < 1:436969/131‑1 (MQ=255)
aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGGTTCAACAATCGCCAG‑CCCCACA‑CCTCT‑AACGACACCTTCACGATCGCGCGGTTccactggagga > 2:83843/1‑229 (MQ=255)
cGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCCAA‑CCTGT‑AACGCCCGATTCACGATCGCGGGCTTCATCGGTCCGAAAGCacgg > 1:830334/1‑239 (MQ=255)
tCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGGGCTTCATCGGGACGAGAGAacggacgg > 1:153535/1‑239 (MQ=255)
ccTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAACCCACAC‑ACCCAAACCCTGT‑‑CCCCCACGATCACGACACGGTGCTTCATCAGTACGAAAAAAAGCACGGaaaa > 2:404018/1‑235 (MQ=255)
ccTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGGTTCAACAATTCCCAGCCCCCAAA‑CCT‑T‑ACCCCCCCACTCACCATACCGTGGTTCTTCGGGACgcaaaaaacgccgagaaaacta > 2:935505/1‑218 (MQ=255)
cTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTTACCAAACCCCCC‑CCCCCAC‑CCCGT‑ACCGCCCCATTCACTACCCCCTGCTTCATCGGTCCAATAAAACGGACCGAAAAACttt > 1:906047/1‑237 (MQ=255)
cTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCCGATTCACGATCGCCTGCTTCATCGGAACGATAGAACGGACGGGAAATCTGt > 1:688921/1‑239 (MQ=255)
cTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAACTGCCCC‑CCCCAAA‑CCCGT‑ACCCCCCAAATCCCAAGCGCGCGTTTCACCGGGGCGCTAAAACAGAAGGaaaaaactt > 2:730696/1‑234 (MQ=255)
cTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGt < 1:562843/239‑1 (MQ=255)
gCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCCGA‑ACCGCCAGATTCACCATCGCGTCCTTCCTCGGTCCGAACGACCCGACGGGAAACCtttt > 1:881376/1‑238 (MQ=255)
ccggtggcgcgtaaaaCCCCTTACCCTTCCGGCAAAGGGGAAGTTTACCCCCGCTTTAACCGCGGACACCAAACCACCAGCCGTAACCCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑c < 2:936612/226‑1 (MQ=255)
cggttccgcggTAAACCCCTTCCCCTCCCGCAAAATGCAAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCCCCAGCCTTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑cc < 2:1054681/229‑1 (MQ=255)
ggATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCa < 2:207327/161‑1 (MQ=255)
ggATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCa > 1:207327/1‑161 (MQ=255)
gcggggTAAACGCCCTATCCTGCCGGCAAATGCGAAGTTTAACTCCGTCTAGACGGCGGCAACAAAATCACCAGCCGTAAACCGCCAAGCGGGCTGTCTTCGGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCt < 1:870707/239‑1 (MQ=255)
cggcgTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTGAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCt < 1:468741/238‑1 (MQ=255)
gCCTTACCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATCCAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGAc < 1:730696/239‑1 (MQ=255)
ttACCCTGCCTGAAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCAt < 1:874192/239‑1 (MQ=255)
tcccttcctgCAAATGCGAAGTTTACCTCCCCTGATACAGCGGCAACACAAGCACCAGCCGAAAACCGCCAGGGGGGCTGTTTTCTGCCTGCACCCCGCCACGATGATGCGGAA‑TGGCGGGTTCAACAATCGCCAG‑CCCCAAA‑CCTGG‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGCCCAtcg < 2:916578/237‑1 (MQ=255)
aTCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCCACAATCTCCCG‑CCCCCAA‑CCTAT‑ACCGCCAGCTTAACAGTCGCGGGCTTCATCCGGACGATCTAACAGGCGGAAAAACTTGTCCCGATCTTACCGGGC‑AACCCCAGGACCAacg > 2:892384/1‑239 (MQ=255)
gtcttaaattgggAAGTTATACCCCGCTTTTAGGGCGGCACACAAAACGCCAGCCGTAATCCGCCCAGCGGGCTTTCTTCTGCCTCCCACCAGCCACGATGCTGCTGGA‑GGGCGGTTTCAACACTCGCCTG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTTCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 2:612888/227‑1 (MQ=255)
gccttcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCCTCCGTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTGCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:529189/239‑1 (MQ=255)
gccttcAAATGCGAAGTTTAACTCCGCTTAAACCGGGGCAACCAAATCCCCAGCCGTAACCCGCCCAGCGGGCTGTCCTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:200946/239‑1 (MQ=255)
gcctccAAATGCGGATTTTACCCCCCGTTTAACAGGGCCCACCAAATCCCCGGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTCCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 2:644749/239‑1 (MQ=255)
gccgtcAAATGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTTTTCTGCCTTCCCCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:989264/234‑1 (MQ=255)
ctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCCAA‑CCTGT‑ACCGCCAAATTCACGATCCCGGGCTTCATCGGTACGATAGAACGGACGGAAAAACTGTTCCCGATCTT‑CCGGGCTAACGCCCGGACCacccccgttc > 1:258065/1‑229 (MQ=255)
cctcAAATGCCAAGTTTAACCCCTCTTATACAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCCTCCCCCAGCCACGATGCGGCTGAA‑TGGCGGTTTAAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCa < 2:534260/236‑1 (MQ=255)
aaatcgaaaGTTTAACTCCGTTTAGACAGGGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGt < 1:83261/232‑1 (MQ=255)
aaaggggAAGTTTAACCCCGCTTACACAGGGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTTTTCTTCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGt < 2:616874/233‑1 (MQ=255)
aaaTGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGt < 1:59780/239‑1 (MQ=255)
aaaTGCGAAGTTTAACCCCGCTTATACAGGGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGt < 1:910958/239‑1 (MQ=255)
ttAACTCCGCTTATACAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATa < 1:673477/238‑1 (MQ=255)
ttAACCCCGTTTATACAGGCGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGGCCTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAc < 1:573306/239‑1 (MQ=255)
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TGATGACGATCAATATCACCGTT‑TACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTT‑CCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAA‑TGGCGGTTTCAACAATCGCCAG‑CCCCAAA‑CCTGT‑ACCGCCAGATTCACGATCGCGTGCTTCATCGGTACGATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAC > NC_000913/4103369‑4103839
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
