Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F27 I0 R1
|
322 |
127.1 |
2757226 |
91.8% |
2531133 |
223.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,103,606 |
T→C |
15.8% |
S457G (AGT→GGT) |
cpxA ← |
sensory histidine kinase in two‑component regulatory system with CpxR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,103,606 | 0 | T | C | 15.8%
| 270.8
/ 7.8
| 120 | S457G (AGT→GGT) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR |
| Reads supporting (aligned to +/- strand): ref base T (60/33); new base C (2/21); total (62/58) |
| Fisher's exact test for biased strand distribution p-value = 9.63e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 121 total aligned reads displayed.
TTGATGACGATCAATATCACCGTTTACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAC > NC_000913/4103368‑4103839
|
tggaggggggtcaatctacccGTTCACTCTCCCCGCCCGGGTTAGCGAAAAGTTGTGCGCGGACGACGCAAAAGCGCCGAATGGGGGGCAAGATCGAAGTTTTT‑ACCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACt < 2:371078/220‑1 (MQ=37)
tggggacgtataaTATCCCCGTTTACTCTCCGCGGCAGGGTTAACGAAAAGCTGGGCGCGGACGAGGCAAAGGCGGCGACGGAGCGGCAAGGTCGAAGATTTT‑TCCCGCCGGGTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGCCGCTATCAGCGTCGCACC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTc < 2:525524/228‑1 (MQ=255)
tgtgaaaaaaaaTCTCCCCTTTTTCTCCCCGCTGGGGGGTTATCAAAAAGCTGGACGGGGACGATGAAAAAGCGCCGATGGGGCGGAAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc < 2:1230884/229‑1 (MQ=255)
tcaagaaccccGTTTACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTtata < 1:583318/229‑1 (MQ=255)
tttACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAAAGCGAAGTTTAACTCCGCtttaaaaccggaaacaaa > 2:1226749/1‑223 (MQ=255)
tttACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGAG‑‑CCGTAAACGCCTTATCCTGCCCGCAAATGCGAAGGTTAACTCCCCTAATACACAGGCAACCaa > 2:1127947/1‑239 (MQ=255)
tttACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATCCG‑‑GCGTAAAACCCTGACCCTGCCTGCAAATGCAGAGTTGAACTCCCCTTAAAAAGCGGCAAACaa > 2:903687/1‑239 (MQ=255)
gttACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCCAATGCCGGATGCG‑‑GCGTAAACCCCTTCTCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCaa > 2:1348763/2‑239 (MQ=255)
tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGCCTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGGTTAGGCCTGATAAGACGCTATCAGCGTCGCACC‑AGGCATCCTGCTCAAATGCCGGATCGG‑‑GCCGTAACGCCTTTTCCTTCCTGCAAATGCAAAGTTTACCTCCACTTAAACAGGCGCCACCaac > 2:789946/1‑237 (MQ=255)
tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGCAGTTTAACTCCGCTTATACAACGGCAAACAAAt > 2:697035/1‑239 (MQ=255)
tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAACGGCACCCaaa > 1:1075694/1‑238 (MQ=255)
tACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATCCCGGAAGCG‑‑GCGTAAAGCCCTATTCCTCCCTCCAAATCCAAAGTTTAACTCCGCTAAAAACACGGCAACCaaaa > 2:619313/1‑238 (MQ=255)
tctcCGCGGCCGGGTTAAGGAAAAGCTGGCCGCGGACGATGCAAAAGCGCCCACTTACGGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:1264438/239‑1 (MQ=39)
cccccccTGCCGGTTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:450482/233‑1 (MQ=255)
tcCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAcc > 1:283878/1‑238 (MQ=255)
ccGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTTTAAACCGGCAACCAAATCACCa > 1:1256584/1‑238 (MQ=255)
ccGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTCCAAATGCGAAGTTTAACTCCGCTTATACACCGGCACCCaaaaaacaaa > 2:254510/1‑232 (MQ=255)
gcggcggggTTACAGAAAAGGTGGACGCGGAGGAGCCAAAGGGGCGGACTGAGGGGCAAGATCGAAGTTTTT‑CCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGcc < 1:1151817/233‑1 (MQ=38)
gCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGCCTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGTTTGTGGGGAAAATAACCCCAGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAACCGCCTTATCCTCCCGCCAAATGCCAAGTTTAACTCCCCTTATACAGCGGCAACCAAAACACCAgac > 2:275082/1‑237 (MQ=255)
gCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCATCCCTGCAAATGCGAAGTTTAACCCCGCTTATAAACCGGCAACAAAACaaccaacc > 2:89384/1‑239 (MQ=255)
gACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGtcttcgg > 1:1232120/1‑235 (MQ=255)
aCGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGCAAACCGCCCACCGGGCTGCCTTCTccc > 1:628277/1‑238 (MQ=255)
ggaaaaaGCGCCGACTGGGGGGAAAGTTC‑AAGATTTTGTCCCGCCGGTGGTGGGAAAAATACCCCCCTGAGTGGAGGCCTGATAAGACGCTATCAGCGCCGCATC‑AGGCATCCGGCTCAACTGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCa < 2:628277/235‑1 (MQ=255)
gcCGACTGGGGGGAAAGAGCGAAGATTTT‑TCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTACCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCa < 1:1318411/237‑1 (MQ=255)
ccgtcgtgcgggaaaGAGCGAAGATTTT‑CCCCGGCGGTTTGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCGGCCTGCAAATGCGAAGTTTAACGCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 1:577086/226‑1 (MQ=38)
ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGACGTTTAACTCCGCTTATACAGCGGCAACCCAATCACAAGCCGGAAACACCCCAACGGGCTGCCTTCTGCCTTCACCCAGCCACGa > 2:270851/1‑239 (MQ=39)
ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTaaa > 1:847369/1‑200 (MQ=255)
ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGGAAACCGCCCAGCGCGCTGTCTTCTGCCTTCCCCCAGCCACg > 1:648428/1‑238 (MQ=255)
ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAACCACCACCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCaccacc > 1:437727/1‑232 (MQ=255)
cGACTGGGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 1:270851/238‑1 (MQ=255)
gACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGTGGAAAATAACCCCCGGCGTGTAGACCTGATAAGACGCTATCAGCGTCGCATC‑AGACATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGACTTAACCTGCCTGCAAATGCGAAGTTTAACTCCGCTTTTACTACGCCAACCAAATAACCAACCCTAACCCGCCCACCGGGCTGTCTTCTTCCTTACCCCAGcgccgag > 2:1077866/1‑232 (MQ=255)
tCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACCGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCGTTCTTCTGCCTTCACCCACCCCCCATTCCCCTCAATGGC‑ggg > 2:1062398/1‑238 (MQ=255)
tttt‑tCCCCCGGGTGGTGGGGAAAATAACCCCCGTGGTGTAGGCCTGATAAGCCGCTGACAGCGTCGCATC‑ATGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTcaaca < 2:648428/239‑1 (MQ=255)
tt‑tCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTcaacaa > 1:280599/1‑238 (MQ=255)
t‑tCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACAGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGCATGGC‑GGTTTCACCAAt > 1:513503/1‑238 (MQ=255)
ccgcggGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGcc < 1:1141543/239‑1 (MQ=255)
ccgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGAAAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGcc < 1:89384/239‑1 (MQ=255)
ccgccgGTTGGGGGGAAAATACCCCCCGGGGGGGTGGCCCGATAAGCCCCTTCCCGGGT‑GCAACTAGGCATCCTGGTCAAATGCGGGATGGG‑‑GCGTAAACGCCTTATCCTGCCTGAAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGcc < 2:1075694/239‑1 (MQ=255)
ggTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGccc < 1:1226749/239‑1 (MQ=255)
aaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGGGTTTAAACACCTCCCACCCCCAAAccgtcc > 2:817288/1‑234 (MQ=39)
acccccgGGGGTGGATGCCTGATAAGCCGCTGTCGGCCGGTCATC‑AGGCCTCCTGGTCAAGTGGCGTACGGG‑‑GGTAAAACCCCTTATCCTCCTTGGCAGTGAGAAGTTTAACCCCGCTGATACCGCGGCAACCAAACCACCAGCCGTAATCCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGcc < 2:933052/237‑1 (MQ=255)
accccccGGTGTGGAGGCCTAAAAAGAGCCTTCCAGGGTCGCAAC‑GGGCCTCCTGTCAAAAGGCCGGATGCG‑‑GCGTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACCCCGTTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGcc < 2:312770/237‑1 (MQ=255)
tttataagggaaggggCGTGAAAAGACGCTTACCGCGGCGCACC‑AGGAAACCTGCCAAAATGCCGGAGGGG‑‑GCGTAAACCCCTTACCCCGCCTGCAAATGCGAAGTTTAACCCCGCTTATACAGGGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGcc < 2:170892/224‑1 (MQ=255)
cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAACTGCCAGCCCCCAACCTGTACCCCCAg > 1:93604/1‑239 (MQ=255)
cccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGCTGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCACCGGGCTGCCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCACCCCCAAACCTGTCCCCCCAgga > 1:655224/1‑237 (MQ=255)
ccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGGTTCAAAAAACACCCCCCCCCAACCCGTACCCCCACA‑tt > 2:1037604/1‑239 (MQ=39)
aGTGTAGGCCTGATAAGACGCTACCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGccc < 1:1256249/215‑1 (MQ=255)
gtAGGCCTGATCAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATCCACCGGCAACCAAATCACCAGCCGTAAACCGCCCAACGGGCGTCCTTCTTCCTTCACCCTGCCACGATGCTCCTGAATGGC‑GGTGTCACCAACAGCCCCCCCCCAACACATACCCCCACA‑TA‑CACgct > 2:112963/1‑236 (MQ=255)
tAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCCCGAGGCTGCTGAAGGGC‑GGTTTCAACAAACCCCACCCCCCAACCtctcccccccacatcccaccag > 2:873767/1‑218 (MQ=255)
tAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AAGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCCAAAATCGCCAGCCCCCAAACTGTTCCGCCAAA‑tttccgaac > 1:723229/1‑231 (MQ=255)
ccTGATAAGACGCTTCTCGCGTCCCATC‑CGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGAAAACGCCTTCTCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATCCAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTg < 2:280599/239‑1 (MQ=255)
cTGAAAAGACGCTATCAGGGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGGG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGc < 1:1015451/239‑1 (MQ=255)
tGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACTATGCTGCTGAAGGGC‑GGCTTTCACAAACCCCCGCCCCCAACCCCTAccctactcctataaacaacaaac > 2:1256249/1‑217 (MQ=255)
aTAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTTAACAATTCCCACCCCCCAACCTGTACCGcccagtttcagatctgcggctt > 1:808388/1‑218 (MQ=255)
aTAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCCACCCCGTACCCCCCCA‑TT‑CAccacaccgggctt > 1:110762/1‑226 (MQ=255)
aTAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCCAACCCTTACCCCCAGATTT‑CAC‑ATCGCCTGCTTc > 1:752506/1‑239 (MQ=255)
aaggcgtttccggcgtccctcc‑AGGCATCCTGCTAAAATGCCGGATGGG‑‑GCTAAAACGCCTTATCCTGCCTGCAAATGCAAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCAt < 2:271295/218‑1 (MQ=255)
aCGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAAACCCCCGCCCCCAACCCTTACCGCCAGA‑TT‑CCCGATctgtctctttttccc > 1:170892/1‑225 (MQ=255)
aTCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTCCTGAATGGC‑GGTTTCAACAACCCCCAGCCCCAAACCCGTACCCCCCCA‑AT‑CACgcaaccggggttccaccggagca > 2:1262589/1‑217 (MQ=255)
cGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCACCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCCCGTGCTTCACCgtgccgagagaa > 1:874700/1‑228 (MQ=255)
tCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGAGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAAAAATCGCCAGCCCCAAACCTGTACCGCCCGA‑TT‑CACCATCCTGTGCTTCTCCCGTACG‑ATAGAac‑g > 1:778251/1‑239 (MQ=255)
ccccatcggcactcctccTAAATTGCCGGATGGG‑‑GGCTAACCCCCTTATCCGGCCTGAAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAac‑g < 2:1232120/227‑1 (MQ=255)
gCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCCAACCTGTACCGCCAGG‑TT‑CCCGATCGCGTGCTTCATcctgtcccttttacc > 1:1023864/1‑223 (MQ=255)
cccaccggcacgcTGCTCAAAT‑CCGG‑TGCGGCGCGTAAACGGCTTCACCTGCCAGAAAATGGGAAGTTTAACCCCCATTTTGCAGCGACCACCAAAGCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAAGCGCCAGCCCCAAACCTGTGCCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAac‑gga < 2:817435/227‑1 (MQ=255)
aTC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCCGA‑TT‑CACGATACCGGGCTTCATCGGTACG‑ATAGAac‑ggacg > 1:176334/1‑239 (MQ=255)
gggCATCCTGCTCAAAGGCCGGATGCG‑‑GCGTAACCGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGaa < 1:697035/238‑1 (MQ=255)
ccTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCACGCCCCAAACCTGTACCCCCAGA‑TT‑CACGATCGCGCGCTTCATCGGTACC‑CTAGAAC‑GGACGGaaaa > 1:928329/1‑235 (MQ=255)
cTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTTAACAAACGCCAGCCCCAAACCCGTACCGCCAGA‑TT‑TACCATCCCGGGCTTCCTCGGTACG‑ATAGAAC‑GGACGGgaaaaccgt > 1:376631/1‑234 (MQ=255)
cTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCTCCCGCCCCAAAACTGTACCGCCCGA‑TT‑CACCAACGCGTGCTTCATCGGGACG‑AAAAAAC‑GGGAGGAAAAACttt > 2:16413/1‑237 (MQ=255)
taaaGGCCGGATGCG‑‑GCGTAAACGCCTTACCCTGCCGGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTcgcg < 1:1037604/238‑1 (MQ=255)
cAAAGGCCGGATGGG‑‑GGGTAAACGCCTTACCCGGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTcgcg < 1:16413/239‑1 (MQ=255)
aaaaTGCCGGATGCG‑‑GCGAAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGGTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTcgcg < 1:1040794/238‑1 (MQ=255)
aTGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCCCGGGCTTCATCGGTACC‑GAAAAAC‑GGACGGAAAAACTGTTCCCGa > 1:843703/1‑237 (MQ=255)
aTGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGGTTCCACAATCGCCCGCCCCCAACCTGTCCCCCCCGA‑TT‑CGCGCACGCCCGCTTCAACGGTACG‑AAAAAAC‑CGGCGGAAAAACTTTTcgcgcc > 2:56725/1‑236 (MQ=255)
ggggtGCG‑‑GCCTAAACCCCTTATCCTGCCACCAAAAGCGAAGTTTAACCCCGCTTTAACAGCGGCACCCAAACCACCAGCCGTAAACCGGCCAGCGGGCTTTCTTCGGCCTTCCCCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAAGCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTcc < 2:928329/235‑1 (MQ=255)
ggATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACCATCGCCCGCCCCCAACCCCTACCCCCCGA‑TT‑CACGATCGCGGGCTCCATCGGTACG‑ATAAAAA‑GGACGGAAAAACTTTTTGCGATCTTCCg > 2:566083/1‑239 (MQ=255)
ggATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATTGCCAGCCCCCAACCTGTACCGCCAAC‑TT‑CCCGATCGCGTGCTTCCTCCGTACG‑CGAGAAA‑CGCCCGAAAATCCTTTTGCAGTCTTccc > 1:584753/1‑238 (MQ=255)
cgggtggcgcttAAACCCCTTTACCTGCCTGAAAATGCGAATTTTAACTCCGCTTATACAGCGGCAACCAAACCACCAGCCGTAAACCGCCCAGCGGGCTGTCGTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTcc < 1:406985/228‑1 (MQ=255)
gg‑‑gcgTAAACGCCTTATCCCTCCGGCAAATGCGAAGTTTAACCCCCCTTATACCGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCt < 1:88933/237‑1 (MQ=255)
cg‑‑gcgAAAAGCCCTTAACCTGCCTGAAAATGCAAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCt < 1:817288/238‑1 (MQ=255)
g‑‑gcgTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAAAAATTCCCCGGCCCCAACCTGTACCCCCAAA‑TTCCACCA‑CGCGGCCTTCCACGGGATG‑ATAAAAA‑GACCCGAAAAACTTTTCGCGACCGTCCggggcaa > 2:496919/1‑235 (MQ=255)
taacccgcTTCTCCTGCCGGCAAAGGCGAGTTTTCACCCCGCTTGAACAGCGGCACCCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGcc < 2:808388/232‑1 (MQ=255)
ttttccctccctgCAAATGCGAAGTTTAACGCCGCTTATACAGCGGCAACCAAACCCCCAGCCGTAACCCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCa < 2:376631/234‑1 (MQ=255)
cTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGACTGGC‑GGTTTTCACAATCGCCAGCCCCAAACCCGTACCCCCCAG‑TT‑CCCGGTCGCGGCGTTTACCGGGCCGCATA‑AAC‑GGACGGGAAACCCTTTTGCCATTCTCCGGGCTAACCCCCGAAccc > 2:1131562/1‑238 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTGCACAATCGCCCGCCCCCAACCCTTACACCCAAA‑AT‑TACCAACGCGTGGTTCACCGGGACC‑ATAGAACAGGACGGAAAA‑CTGTTCGCGACCTTCCGGGCGaaaccccggcccac > 2:1138199/1‑227 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCCACAAACGCCCCCCCCACACCCTTACCGCCCGA‑TT‑CCCGCGTGCGTTCTTCATCGGTACG‑ATAGAAC‑CGCCGGAAAATATGTTCGCCATCTTCCCGGCTAAAGcccagacac > 2:1259743/1‑231 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGGAAATCTGTTTGCGATCTTCCGGGCTAACGCCAGGACCa > 1:873193/1‑238 (MQ=255)
ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGGACG‑GTAGAAC‑CGACGGAAAAACTGTTCCCGAGCTTTCGGGCTAAAGCCCAGACCa > 1:766169/1‑238 (MQ=255)
tccttgcccgcAAATGCGAAGTTTACCCCCCTTTTTACCGGGGCACCCAAACCACCAGCCGTAAACCCCCCAGGGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCAtcg < 2:1097194/235‑1 (MQ=255)
gcctgtAAATGCGAATTTTAACTCCGCTTATCCAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:1348763/239‑1 (MQ=255)
gcctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCGCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:275082/239‑1 (MQ=255)
gcctgcAAATGCGAAGTTTAACCCCGCTTAATCAGCGGCCACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:228762/239‑1 (MQ=255)
gcctgcAAATCGGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 1:59977/239‑1 (MQ=255)
gcctcaaattGCGAATTTTAACACCGCTTTTACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGTGCTGTCTTCTTCCTTCCCCCAGCCACGTTGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCGGTACCGCCAGA‑TT‑CACGATCGCGTGCATCAGCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCgtcgtc < 2:466446/230‑1 (MQ=255)
ctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACCAACTCCACCCCCACACCTGTACCCCCACA‑TT‑CCCCAACGCGCGCTTCATCGGTCAG‑ATAAAAC‑CCGCGGCAAAACCGTTACCGCACTTCCGGGCAAACCCCCGGCCCACCACCGTcc > 2:652103/1‑238 (MQ=255)
ctgaAAAGGCGAATTTTAACCCCGCTTATACAGCGGCAACCAAACCCCCAGGCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCCCGGTGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCa < 2:331820/239‑1 (MQ=255)
cggcAAATGCAAAGTTTAACCCCGCTTATGCAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCa < 1:619313/237‑1 (MQ=255)
acgcaaattttAACCCCTCTTATACCGCGTCCACCAAATCCCCAGCCTGAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCCCGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTaa < 2:1238989/231‑1 (MQ=255)
aTGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTTTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTaa < 1:588753/239‑1 (MQ=255)
ttAACTCCGGTTATACAGCGGCAACCAACTCACCAGCCGGAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAc < 1:156020/239‑1 (MQ=255)
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TTGATGACGATCAATATCACCGTTTACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATGCG‑‑GCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATCGGTACG‑ATAGAAC‑GGACGGAAAATCTGTTCGCGATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAC > NC_000913/4103368‑4103839
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
