Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
260 |
102.5 |
2178490 |
93.2% |
2030352 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,368,956 |
C→T |
13.1% |
L98L (CTA→TTA) |
fxsA → |
suppressor of F exclusion of phage T7 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,368,956 | 0 | C | T | 13.1%
| 181.7
/ 2.1
| 81 | L98L (CTA→TTA) | fxsA | suppressor of F exclusion of phage T7 |
| Reads supporting (aligned to +/- strand): ref base C (23/46); new base T (5/7); total (28/53) |
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGG‑TTATGCCATTTTCCGGCGTTTTTCGTTTT > NC_000913/4368730‑4369193
|
ggTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAGCGGCGGAGAAGGTTTAAAAG‑GTTTTGCTGGATGTTTCTTGTTTTTT‑GCTTTTTTTTCCGGGGG‑TTTTTTCCC‑GCCTCTCCCGGTTTTCtttttttttt > 2:356976/1‑238 (MQ=255)
tGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTgccgc < 1:712138/239‑1 (MQ=255)
gCCCATTGATTGGGGGTTTTGCTGACCCTCGGGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTgccgc < 1:584382/238‑1 (MQ=255)
gTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAAACCAACGGCGGAGATGGTTAAAAGG‑GGTTCGCTGGTCATTGCTGGTTTGCT‑GGTTTTATTACC‑GGGC‑TTTTTTACC‑GAATTCCTCGGGCTTTTAATTTTATTTCCGCCCGTGCa > 1:950581/1‑239 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTGAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAGA‑GGTTCGCTGATCATTGCTGGTTTGCT‑GCCTTTTTTACC‑GGGC‑TTTTTTTCC‑CACTTACTCCGGCTTTCACTTTTTTTGCCCCCGGGGGaaaaaaaaacaa > 2:415928/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAAT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTTCCGCCGGTGCAAAAACa > 1:857576/1‑234 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGGAAACCCAGCGGCGGGGGTGATTTAAAAG‑GTTTCGCTGGTCTATGCTTGGTTGCT‑GCCTTTTTTACC‑CGGG‑GTTTTTTTC‑GCCTTTCTCGGGTTTTTTCTTTTTTTTTCCCCCGGGCaaaaaaaactta > 2:374491/1‑231 (MQ=255)
aTTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAACGGCGGAGATGATTAAAAATGGTTTCCCT‑ATTACTGCCGGTTTGTT‑GCTTTTTTTACC‑GGGCGTTTTTTCCC‑GCTTTCCCCGTTTTTCT‑CTTTTTTTTCCCTCCGTGGAAAAACATCTgc > 2:585509/1‑238 (MQ=255)
tttcTGTCCCTCGTGCTGGTTTTATTCACGTGAGTTTCCGGTATGTCACTGGTACGGAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑Ac < 2:225421/236‑1 (MQ=255)
tgtttcccctgtggCTGTTTTTATTCCCGTTAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACa < 2:573748/226‑1 (MQ=255)
tGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAAACCAACGGGGGGAGTGATTAAAAAG‑GGTTTGCTGGTCATTTGTGGTTTTCTCGTTTTTTTTCCC‑GGGT‑TTTTTTACC‑GCCTCCCCCGG‑CTTTTTCTTTTTTTGCCCCCCGGGAaaaaaaacccgcaa > 2:876656/1‑229 (MQ=255)
ccTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGtcttc < 1:571302/197‑1 (MQ=255)
gTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAAT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACCTCCTCGGGCTTCTACTTTTATTTCCGCCGGTGCAAAAACATCTG‑GCAGTG‑GAGGTGATTCCg > 1:89972/1‑237 (MQ=255)
ttttcccggttgtttttggTTTGTCACTGGTACTTAACCAGGGGTTTAAGAATTTCGGGCTGATGCAGTAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTg < 2:496011/222‑1 (MQ=255)
ttCCCGTCATTTATCGGTATGTCACTGGTACGGAACCTGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAAGGGCGGCGGGTGAAAACCCAGGGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 2:1005252/239‑1 (MQ=255)
gacaggcAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATGTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 1:243733/232‑1 (MQ=255)
cACTTCAGTTATCGGTATGTCACTGGTACGTAACCGGGGCTTTAAGAATTTCGTGCTGATGCAGCCAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTGCC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTgcg < 1:158367/237‑1 (MQ=255)
cGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGGTTAAAAGG‑GTTTCGCTGATCATTTCTGGGTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTTTACTTTTTTTTCCGCCGGTGCAAAAGACTCTT‑ACCGTG‑AAGttttgtcccccttttggcttt > 1:115720/1‑220 (MQ=255)
cGTCAGTTAGCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCttt < 1:374491/239‑1 (MQ=255)
gTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCCCATTTTCGCtttt > 1:397494/1‑239 (MQ=255)
gTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGGGAAAACCCAGAGGCGGAGATGATTAAAAAG‑GTTTGGCCGGTCATTGCTGGTTTGCT‑GCCTTTATTACC‑CGGC‑TTTTTTACCTGCCTCCCCCGGT‑TTCTACATTTTTTTACGCCCGTGCAAAAACCTCTGTACTG‑G‑AAGTTGATGCCCGATTTTCGCtttt > 2:124030/1‑239 (MQ=255)
aGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACCGTG‑AAGTTGATGCCGCCTTTTCGCtttttt > 1:360739/1‑236 (MQ=255)
cACTGTTACGTAACCGGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcgg < 1:653421/238‑1 (MQ=255)
cACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc < 1:867587/239‑1 (MQ=255)
aCTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCCTTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑CACTTCCTCCGGCTTCTACTTTTTTTTCCGCCGGGGCAAAAACATCTG‑ACCGTGCAAGTT‑ATCCCCCATTTTTGCCTTTCTCTCCAGCCTGggggc‑g > 2:867587/1‑239 (MQ=255)
gTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTTCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTTATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGttt > 1:875630/1‑239 (MQ=255)
ccAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑TCAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCCTGCCTGGCGGC‑GGGTTTAGCGCCg > 1:460613/1‑239 (MQ=255)
aGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTTCTTTTATTTCCGCCGGTGCAAAAACATCTG‑ACAGGG‑AAGTTTATTCCCCATTTGCGCTTTTTTTCCCTGCCTGGCCGC‑GGTTTTTGTGCCggg > 1:986935/1‑239 (MQ=255)
ggCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGGTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGGGCCAAAGCCTCTG‑ACAGTG‑AAGTTGATGCCGCATTTTCGCTTTTCTCCCATGCCCGGCGGC‑GGTTTTAGAGCCcggg > 1:214990/1‑237 (MQ=255)
ttAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGGCGCCGGTGCCAAAGCATCTG‑ACAGGG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGGTTTTAGGCCCgggccggg > 1:961343/1‑234 (MQ=255)
ttAAGAATTTCGGTCTTATGCAGCAAAAAATGGCGGCGGGTTAAACCCCCGCGGGGGAGATGATTAAAAGT‑TTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGt < 2:857576/239‑1 (MQ=255)
ttAAAAATTTCGGGGTGGTGGAGAAAAAAATGGGGGGGGGTGAAAACCCAGGGGCGGAGATGGTTAAAAGT‑GTTTGGCTGATCATTGCTGGTTTGCT‑TCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGt < 2:697582/239‑1 (MQ=255)
aaGAATTTCGTGCTGATGCAACAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTgg < 1:884267/239‑1 (MQ=255)
tttCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGG‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTTCC‑GACTTCCCCGGGCTTCTACTTTTATTGCCGCCGGGGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTTCGCTTTTCTCGCATGCCTGGCGGC‑GGGTTTATGGCCGGGGCCggggggggga > 1:12919/1‑237 (MQ=255)
gTGCTGATGCAACAAAAAATGGCGGCGGGTGAAAACCCAGGGGGGGGGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATAc < 2:1038391/239‑1 (MQ=255)
tgtggagcaAAAAATGGGGGGGGGTGAAAACCCAGGGGCGGAAATGATTAAAAGT‑TTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑g < 2:950581/234‑1 (MQ=255)
ggggcagcaAAAAGTGGCGGGGGTTGAAAACCCGGCGGCGGAGATGATTAAAAGT‑GTTTCGTTGTTATTTGCTGGTTTGCT‑TCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑g < 2:946790/236‑1 (MQ=255)
gaggagaaaaaaaTGGGGGGGGGTGAAAACCCGGCGGCGGAGATTATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGTTGGCGGTAATACTTTT‑g < 2:175878/231‑1 (MQ=255)
aTGCCGGAAAAAATGGCGGCGGGTGAAATCCCGGCGGGGGGGATGATTAAAAGT‑GTTTCGCTTATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTCCTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga < 2:177712/239‑1 (MQ=255)
agcagcaAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga < 1:585509/237‑1 (MQ=255)
aaaaaaTGGGGGGGGGTGAAAACCCAGCGGGGGAGATGATTAAAAGT‑GTTTCGCTTATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAg < 2:89972/239‑1 (MQ=255)
aaaaaaTGGCGGCGGGTGAAAACCCAGTGGCGGATATGATTAAAAGT‑TTTTCGCTGATCATTTCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGa < 1:358057/238‑1 (MQ=255)
aaaTGGCGGCGGGTGAAAACCCAGCGGGGGATATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTAc < 1:474854/239‑1 (MQ=255)
aggaagggTGAAAACCCAGCGGCGGAAATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:58712/234‑1 (MQ=255)
gggcggGTGAAAACCCAGGGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCGCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:570542/237‑1 (MQ=255)
cggcggGTGAAACCCCAGCGGGGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GTTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:481358/238‑1 (MQ=255)
cggcggGTGAAAACCCGGCGGGGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 2:139897/238‑1 (MQ=255)
cggcggGTGAAAACCCAGGGGCGGTGATGATTAAAAGT‑TTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCg < 1:356976/238‑1 (MQ=255)
gcggGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGaa < 1:55601/238‑1 (MQ=255)
tgggtggtgttttttAAAAGT‑TTTTCGCGTGTTATTGCTGTTTTGCT‑GGTTTTATTCCC‑GGTT‑TTTTTTACC‑GACTTCCATGGTTGTTTCCTTTTATTGCCGCCGGTGCAAAATCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 2:121873/226‑1 (MQ=255)
ggtgcggAAATGATTAAAAGT‑GTTTCGCTGATCATTTCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GATTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:736605/236‑1 (MQ=255)
gcggggGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGa < 1:631343/239‑1 (MQ=255)
gagaTGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGGGGGCGGAAAACTTTT‑TATGGTGAGTACCAGCGAAAGGATGGTGAggcgggccgcct > 1:647410/1‑228 (MQ=255)
gtatgatTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATGCTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCt < 1:187267/236‑1 (MQ=255)
gttgtttAAAATT‑TTTTCGCTTCTCTTTGCTGTTTTGTT‑GTTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTTTTCTACTTTTATGGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCtt < 2:360739/233‑1 (MQ=255)
atgatTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTATTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTg < 1:602176/238‑1 (MQ=255)
atTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc < 1:595198/156‑1 (MQ=255)
atTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTggcggc > 2:595198/1‑156 (MQ=255)
aaaatgttttCCCTGATCAGTTCTGGTTTTCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCGCGGTCTTTTACTTTGATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATaa < 1:359225/232‑1 (MQ=255)
gt‑gtTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTATCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGGGAAAGGATGATGAGGGCGGCCGCCTTGATCTTAAAGAc > 1:658889/1‑239 (MQ=255)
tctttttttttgtgttttGTT‑GTTTTTTTTCCC‑GGGT‑TTTTTTCCC‑TATTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 2:12919/224‑1 (MQ=255)
tctgctcttgtttgttttGCT‑GTTTTTATTCCC‑GGGT‑TTTTTTCCC‑GCCTTCCTCGGTTTTCTACTTTTATTGCCGCGGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGTTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 2:986935/224‑1 (MQ=255)
gcttgtCATTGTTGGTTGGCT‑GCTTTTATTACC‑GGGT‑TTTTTTACC‑GATTTCCTCGGTTTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGcc < 1:1057855/234‑1 (MQ=255)
tGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga < 2:913792/171‑1 (MQ=255)
tGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑Ga > 1:913792/1‑171 (MQ=255)
tttttgttttttttttttCC‑GGGT‑TTTTTTACC‑GGTTTTCCCGTTTTTTTTCTTTTATTGCCGCCGGTTCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATCCTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCg < 2:397494/229‑1 (MQ=255)
gtttttttttttttATTCCC‑GGGT‑TTTTTTCCC‑GACTCTCTGGTTCTTCTCCTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGGGCTTTTCTCGCATGCCGGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCg < 2:460613/229‑1 (MQ=255)
gTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTTATCCTAAAAACGATCGCCAGGGTTAAttgcga > 1:935287/1‑234 (MQ=255)
gTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGa > 1:370048/1‑239 (MQ=255)
gTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGGCATACTTTTGGTTGGTG‑GGACCAGCGAAAGGATGATGAGGGCGACCGCCTTGATCATAAAAAAGATCGGCAGGGGTAATGTGGa > 2:497307/1‑239 (MQ=255)
tttGCT‑GTTTTTTTTACC‑GGGT‑TTTTTTACC‑TACTTCCTGGGGTTTTTCTTTTTATTGCCGCCGGTGCAAAAGCTTGTG‑ACAGGG‑AAGTTGATGCCGCATTGGCGCTTTTCGCGCATGCCTGGCGGC‑GGTTGTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGaa < 2:1083201/239‑1 (MQ=255)
tgct‑gcTTTTATTCCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAGGCATCTG‑GCAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCTTGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAAc < 1:124030/239‑1 (MQ=255)
ttttttttttttTCCC‑GGGT‑TTTTTTACC‑GGTTTCCTGGGTTTTTTTTTTTTTTTGCCGCTGGTGCAAAAGCATCTG‑ACAGGG‑AAGTTGATGCCGGATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAAc < 2:214990/233‑1 (MQ=255)
tgtttttttttTCCG‑GGGT‑TTTTTTACC‑GTTTTCCCGGGTCTTTTGTTTTTATGGCCGCCGTTTCAAAAGCATCTG‑ACAGTG‑AAGTTGAGGCCGCATTTGCGCTTTGCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATTCTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACg < 2:608633/234‑1 (MQ=255)
gttttttttATTACC‑GGGC‑TTTTTTAAC‑GAGTTTCGCGGTCTTTTATTTTTATTGCCGCCGGTGGAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACg < 1:415928/234‑1 (MQ=255)
ct‑gctTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCTGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑TCTGGTGAGAACCGGCTCAAGGAGGCGGAGCGCGACCGCCTTGAGTCTAAAAGTGACCGCCAGGATTAAGGtttgaacc > 2:1058586/1‑231 (MQ=255)
gtttttATTACC‑GGTC‑TTTTTTACC‑AACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGGGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCg < 1:836124/237‑1 (MQ=255)
ttttttTCCC‑GGTT‑TTTTTTCCC‑GTTTTCCTCGGTTTTCTACTTTTATTGCCGCCGGTGCAAAGGCATTGG‑ACGGGG‑AAGTTGAGGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGa < 2:1049951/239‑1 (MQ=255)
taCC‑GGGC‑TTTTTTACG‑GCATTCCTCGGTTCTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGTAACGCCGGATTAtgt < 1:30769/239‑1 (MQ=255)
taCC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATGGCCAGGGTTAATGTCGAAAAGCCGGAtttttg > 1:1049951/1‑235 (MQ=255)
ttttttACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGG‑TTATg < 1:1047114/238‑1 (MQ=255)
cTCGGTCTTCTTTTTTTGTTGCCGCCGGTGCAAAAGCATCGG‑ACAGTG‑AAGTTGAGGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGG‑TTATGCCATTTTCCGGCGttt < 1:497307/239‑1 (MQ=255)
ctACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGGGAGTACCAGCGCAAGGAGGATGAGCGGGACCCCCTTGTCCATAAAACACATGCCCAAGGTTAATGTGACAACCCCGGCTTATGGGGTTTGTCCCTTTTCCCGGGGTtttttttttt > 2:667696/1‑239 (MQ=255)
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GGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGT‑GTTTCGCTGATCATTGCTGGTTTGCT‑GCTTTTATTACC‑GGGC‑TTTTTTACC‑GACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTG‑ACAGTG‑AAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGC‑GGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTT‑GATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAATGTCGAAACGCCGGATTATGTGG‑TTATGCCATTTTCCGGCGTTTTTCGTTTT > NC_000913/4368730‑4369193
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
