Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F9 I0 R1	260	102.5	2178490	93.2%	2030352	226.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	4,377,377	T→A	16.1%	Y116F (TAT→TTT)	blc ←	outer membrane lipoprotein cell division and growth lipocalin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,377,377	0	T	A	16.1%	174.9 / 4.1	73	Y116F (TAT→TTT)	blc	outer membrane lipoprotein cell division and growth lipocalin
Reads supporting (aligned to +/- strand): ref base T (56/4); new base A (2/11); total (58/15)
Fisher's exact test for biased strand distribution p-value = 2.65e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAGGTACCGAGATAACGTT  >  NC_000913/4377142‑4377614

tCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATaa                                                                                                                                                                                                                                                >  1:970191/1‑238 (MQ=255)

    gCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGGG‑CAATAACG‑GTATAA‑Ccccc                                                                                                                                                                                                                                          >  1:1028004/1‑239 (MQ=255)

         aaTCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAACGCATGGCGGAATTCCC‑GTACGAGTG‑CAATAACG‑TTATAA‑ACGCCATAgc                                                                                                                                                                                                                                     >  1:197388/1‑238 (MQ=255)

              tATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCCTAGaaact                                                                                                                                                                                                                                 >  1:833680/1‑236 (MQ=255)

              tATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGGTCGGGAGAG‑ATTCCACAGGTAGTCCCGGTCCGGG‑CCGCAAACCAGCGACTGCCGGTATTTCG‑GCACGGGGG‑CAACAACG‑GTAAAA‑CCgacttctttaaac                                                                                                                                                                                                                                >  2:598297/1‑227 (MQ=255)

                     gATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGGCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTGTAA‑CCGCCATAGAATGGAACCAAGa                                                                                                                                                                                                                         >  1:434614/1‑239 (MQ=255)

                        tattGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAACTGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGGATTCCC‑GATCCAGGG‑CAATAACG‑TTATAA‑CCCCCCAAGAAAGGACCaaaaaaga                                                                                                                                                                                                                      >  2:672457/1‑237 (MQ=255)

                        tattGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATg                                                                                                                                                                                                                      >  1:461609/1‑239 (MQ=255)

                             gTCTGGAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGGATTCCC‑GCTCGGGTG‑CAATAACG‑TTAAAA‑CCCCCCTAGAAAAGACCaaaaaagaaaact                                                                                                                                                                                                                 >  2:780830/1‑232 (MQ=255)

                             gTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCAGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGGAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTTTAA‑CCCCAATAGAAAGGACCAAAGCATGgcagt                                                                                                                                                                                                                 >  1:432178/1‑237 (MQ=255)

                                tGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTc                                                                                                                                                                                                              >  1:621373/1‑239 (MQ=255)

                                          cactcactAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCAGTCCGGG‑CCGCCAACCAGCGCATGGCGGTATTCCC‑GACCGAGGG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGAAACTTTaagccc‑agccc                                                                                                                                                                                                   >  1:532882/1‑237 (MQ=255)

                                               actaactaCCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑ACCGCGAGtt                                                                                                                                                                                              >  1:266274/1‑239 (MQ=255)

                                                       ccAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAATAATGACACCTTCAGCGA‑AACGCGAGTTG‑GGGCGcc                                                                                                                                                                                     >  1:1048964/1‑239 (MQ=255)

                                                         aGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCCGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAAGAACACTTTCAGCGA‑AGCGCGGGTT‑‑GTGCGcccgg                                                                                                                                                                                  >  2:211455/1‑236 (MQ=255)

                                                         aGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACAATTTAAGCCC‑AACCCGAGTTg‑ggggccggg                                                                                                                                                                                   >  2:226461/1‑231 (MQ=255)

                                                           gctgctGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CACTAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGAACCTTTAAGCGC‑AGCGCGAGTTG‑GTGGGCCGGTa                                                                                                                                                                                 >  1:322331/1‑239 (MQ=255)

                                                           gctgctGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTa                                                                                                                                                                                 >  1:318316/1‑239 (MQ=255)

                                                           gctgctGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑ACCGCGAGTTG‑GTGCGCCGGTa                                                                                                                                                                                 >  1:212530/1‑239 (MQ=255)

                                                           gctgctGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AACGCGAGTTG‑GTGCGCCggga                                                                                                                                                                                 >  1:673466/1‑237 (MQ=255)

                                                           gctgctGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGCG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCACAGAATGACACTTTCAGCGA‑AGCGCGAGTTG‑GTGCGCCGGTa                                                                                                                                                                                 >  1:212975/1‑239 (MQ=255)

                                                               ctgTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAga                                                                                                                                                                             >  1:352352/1‑238 (MQ=255)

                                                                tgTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCCAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTCTAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAACGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGt                                                                                                                                                                             >  1:861026/1‑238 (MQ=255)

                                                                    cccAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCt                                                                                                                                                                        >  1:800419/1‑239 (MQ=255)

                                                                         ataaatTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTc                                                                                                                                                                     >  1:199103/1‑237 (MQ=255)

                                                                                       aTCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCtgctgc                                                                                                                                                      >  1:618707/1‑238 (MQ=255)

                                                                                       aTCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCCC‑ACCGCGAGTTG‑ATACGCCGGTACAGTACGCTTTCCCTTCACTCTGCTGcc                                                                                                                                                     >  1:959057/1‑239 (MQ=255)

                                                                                       aTCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCAGGTG‑CACTAACG‑TTATAA‑CAGCCATAGACAGGCACCAAGAATGATACTTTATGCGC‑TGCGCG‑GTGGTGTGCCCCGGGAAAAAACCGTTTCCCTTccccccccagcc                                                                                                                                                     >  2:27188/1‑228 (MQ=255)

                                                                                                 tCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GCTCGAGTG‑AAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATAACACTTTCATCGC‑AACGCGAGTTT‑GGGCGCCGGAAAAGAACGCTTTACATTCCAACCGATGCCACATTca                                                                                                                                              >  2:148553/1‑235 (MQ=255)

                                                                                                 tCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GGGCGCCGGTAAAGGACGCTTTCCCTTCACTCTGCTGCCACATTcc                                                                                                                                              >  1:36601/1‑236 (MQ=255)

                                                                                                 tCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACAATTTCAGCGC‑AGCGCGAGTTG‑GTGAGCCGGTAAAGTACGCTTTCCCTTCAATCTGCTGCCACATTcc                                                                                                                                              >  1:96750/1‑236 (MQ=255)

                                                                                                 tCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAAGACCAAAGAATGGCACTTTCAACGA‑AGCGCGAGTTG‑GTGCGCCGGTAAAGAAAGCTTTTCCTTCCCTCTGCTGCCACATTcc                                                                                                                                              >  1:533011/1‑236 (MQ=255)

                                                                                                 tCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGGATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GCGCGCCGGTAAAAAACGCTTTCCCTCCCCCCTCCCGCCACATTcc                                                                                                                                              >  2:933576/1‑236 (MQ=255)

                                                                                                                 ccAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGCGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCCGCCCCATTCCCCTGTCAGGGTTAAAGCCt                                                                                                                           >  2:8644/1‑239 (MQ=255)

                                                                                                                                tCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GGGGGCCGGTAAAGAACGCTTTCCCTTACCCCTCCTGCCCCATTCCCCTGCACGGGTTTAAGCCTTTATTAAAGAAAtta                                                                                                            >  2:145255/1‑238 (MQ=255)

                                                                                                                                   cTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTcc                                                                                                                                                                    >  1:152203/1‑180 (MQ=255)

                                                                                                                                   cTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTTTCAGGGTTTTAGc                                                                                                                             >  1:977951/1‑219 (MQ=255)

                                                                                                                                   cTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAg                                                                                                          >  1:71893/1‑238 (MQ=255)

                                                                                                                                     tCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGgc                                                                                                        >  1:556157/1‑238 (MQ=255)

                                                                                                                                                  gtgcggTGGGGGGGAT‑TAGCCAGGGGTTGTCGCGGCCCGCC‑CCCAAACCCAGGGCAGGGGTGTACCCCG‑GATGGAATC‑AAATAAGT‑GTAAAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACg                                                                                           <  2:322331/233‑1 (MQ=255)

                                                                                                                                                   tgggggtggggAGAGATACCCAGGGGGAGGCGCGGTCCGGC‑CAGCAAACCAGCGGATGGCGGTATCCCC‑GAGTGATAA‑AAATATGG‑TTAAAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACg                                                                                           <  1:780830/230‑1 (MQ=255)

                                                                                                                                                      cgggCGGGAGAG‑TACCCACGGGTAGGCGC‑GTCCGGGCCCACAACCCGGCGCGGGGCGTTATCCCC‑GAGCGAGTG‑CAATACCG‑TTAAAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAgg                                                                                       <  1:8644/235‑1 (MQ=255)

                                                                                                                                                          cGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCCAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGGACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGAAATTCAGGCCGCCCTCCTCAACCAGGCGGTa                                                                                  >  2:688590/1‑239 (MQ=255)

                                                                                                                                                                ag‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAACGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTAAGCTTTCCCTTCCCTCTGCTGCCACATTCCTCTTTCAGGGGTATAGCCTTTATTAATGAACTTCAGGCCGCCGGCCTCCACCAGGCTGGttgttgg                                                                            >  2:818988/1‑238 (MQ=255)

                                                                                                                                                                   tacacagagggaggcggggccgggg‑CCAAAACCCGGCGGAGGGCGGTATCCCC‑GTTCG‑GTGACAATAAGT‑TTAAAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCgg                                                                          <  1:145255/217‑1 (MQ=255)

                                                                                                                                                                    ctccagaggctgcgggggTCCGCG‑CCAAAAACCGGCGCATGGCGGTATCCCA‑GGTGGGGTT‑AAATGATG‑TAATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCgg                                                                          <  1:264620/222‑1 (MQ=255)

                                                                                                                                                                            gTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACtttt                                                                  >  1:954353/1‑238 (MQ=255)

                                                                                                                                                                            gTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGAATTCCC‑GATCCAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGAGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTCTAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACtttt                                                                  >  1:215100/1‑238 (MQ=255)

                                                                                                                                                                              aGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGCCCTCACGCAGGCTGTATGTTGCGGTGACTTTTTcc                                                               >  1:172461/1‑239 (MQ=255)

                                                                                                                                                                               gTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGCCATTCAgg                                                                                                         >  1:19796/1‑196 (MQ=255)

                                                                                                                                                                               gTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACCTTCAGGCCCCCGTCATCACCCAGGCTGTATGCTgtcccttaaacaaatc                                                              >  2:60084/1‑224 (MQ=255)

                                                                                                                                                                               gTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTAATCACCCGGGCCGGATGTTGCGGGGACTTTTTcaa                                                              >  2:580447/1‑237 (MQ=255)

                                                                                                                                                                               gTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGCCATCACGCAGGCTGTATGTTGGGGGGACTTTTTCCa                                                              >  2:677790/1‑239 (MQ=255)

                                                                                                                                                                                tCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTATTGACATTCAGGCCGCCGTCATCACGCAGGCTGTCTGTTGCGGGGCCTTTTTCCa                                                              >  1:428102/1‑238 (MQ=255)

                                                                                                                                                                                          gggctccacaCCAACGCAGGGGGGTAATCCC‑GCGTGAGGC‑CAATAAAGTTTAAAA‑CCGGCATAGAAAGGACCAAAGAATGACCCTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGtt                                                     <  1:516154/230‑1 (MQ=255)

                                                                                                                                                                                                 aaaCCCGCGCGTGGGTGTATTCCCAGAGCG‑GAG‑CAAATAAG‑TTAAAACCCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCg                                              <  1:226461/239‑1 (MQ=255)

                                                                                                                                                                                                 aaaCCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCgg                                             >  1:649600/1‑239 (MQ=255)

                                                                                                                                                                                                        cgcATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCTGCCGTAATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCaa                                      >  1:811083/1‑239 (MQ=255)

                                                                                                                                                                                                             ggCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGGTGTATGTTTGGGGTACTTTTTCCAGTCCCACTTCAAAACGGGGGTCAAAAggg                                 >  2:439648/1‑239 (MQ=255)

                                                                                                                                                                                                                ggttttccaggcgcGAGTG‑AAAAACCG‑TAATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACggg                                <  1:818988/225‑1 (MQ=255)

                                                                                                                                                                                                                gcgatatccccggtgggttcaaaTAACG‑TTGAAG‑CCGCCATAGAAAGGACCAACGAATGACCCTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCTGGTAAAGTTCGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACggg                                <  1:528512/218‑1 (MQ=255)

                                                                                                                                                                                                                ctgtctgccgggttcggcg‑CAAAAACG‑TTAACA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACggg                                <  1:933576/220‑1 (MQ=255)

                                                                                                                                                                                                                atttccccc‑GACGGAGTG‑AAATAAGT‑TAATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGc                               <  1:672457/232‑1 (MQ=255)

                                                                                                                                                                                                                 ggataccccagtcggggtaacaaaaCG‑TAAAAC‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACggg                                <  1:439648/215‑1 (MQ=255)

                                                                                                                                                                                                                  tATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAACCGGGCaa                             >  1:875937/1‑238 (MQ=255)

                                                                                                                                                                                                                  tATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGGATTTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCaa                             >  1:1039414/1‑238 (MQ=255)

                                                                                                                                                                                                                        cccgtcggtgggaaggtggg‑TTATAT‑CCGGAATAGAAAAGACCAAAGAATGACACTCTCGGCGC‑AGGGCGAGTTG‑GTGGGCAGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCa                        <  2:959057/220‑1 (MQ=255)

                                                                                                                                                                                                                             cGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAg                  >  1:803052/1‑239 (MQ=255)

                                                                                                                                                                                                                               aGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTaaa                                                                                                                                                                               >  1:94758/1‑80 (MQ=255)

                                                                                                                                                                                                                                 tG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAGGTa               >  1:37132/1‑238 (MQ=255)

                                                                                                                                                                                                                                  tcaaaTAACG‑TTTAAC‑CCGACATAAGAAGGACCAAAGAATGACCCGTTCAGCGC‑AGCGAGAGTTG‑GGTCGCCGGTAAAGTCCGCTTTCCCTGCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAGGTAc              <  2:1048964/236‑1 (MQ=255)

                                                                                                                                                                                                                                  catatccctg‑TTAAAC‑CCCCCCTAGAAATGCCCAAAGAATGCCTCTTTCA‑CGCGAGCCCGAGTTG‑GTGCCCCGTGAAAGTTCGCGTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAGGTAc              <  2:557643/230‑1 (MQ=255)

                                                                                                                                                                                                                                             ttATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATa                      >  1:439582/1‑221 (MQ=255)

                                                                                                                                                                                                                                               ataA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGCATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAGGTACCGCGATAACGtt  >  1:817721/1‑239 (MQ=255)

                                                                                                                                                                                                                                                taA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATa                      >  1:321660/1‑218 (MQ=255)

TCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAACTACCAGGCTGCTGTACCCAAATAAATTTACTGACATCAAACCCTTCCCGGGTCGCGACTGCCAGCATCTCCTGTTTCACTTCGTCAGAAATGGTTGGCGTGCGGGAGAG‑TATCCACAGGTAGTCGCGGTCCGGG‑CCGCAAACCAGCGCATGGCGGTATTCCC‑GATCGAGTG‑CAATAACG‑TTATAA‑CCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGC‑AGCGCGAGTTG‑GTGCGCCGGTAAAGTACGCTTTCCCTTCACTCTGCTGCCACATTCCTCTGTCAGGGTTATAGCCTTTATTAATGACATTCAGGCCGCCGTCATCACGCAGGCTGTATGTTGCGGTGACTTTTTCCAGTCCACGTTCAAAGCGGTGATCAAAACGGGCAATCTCATACCAGGTACCGAGATAACGTT  >  NC_000913/4377142‑4377614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A