Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F18 I0 R1
|
55 |
72.5 |
2455354 |
98.2% |
2411157 |
146.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
2,718,882 |
A→G |
10.4% |
M75T (ATG→ACG) |
kgtP ← |
alpha‑ketoglutarate transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 2,718,882 | 0 | A | G | 10.4%
| 272.6
/ 17.2
| 111 | M75T (ATG→ACG) | kgtP | alpha‑ketoglutarate transporter |
| Reads supporting (aligned to +/- strand): ref base A (38/61); new base G (6/6); total (44/67) |
| Fisher's exact test for biased strand distribution p-value = 5.36e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 |
Only 100 of 112 total aligned reads displayed.
GAGCCCACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGG > CP009273/2718736‑2719026
|
gAGCCCACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGCTCCGACACACCTCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCCATTGGGCGCATc > 1:758019/1‑149 (MQ=255)
cccACGTACCTATAGTTTCATAACCTGTGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAgg < 1:121257/149‑1 (MQ=255)
ccACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGa < 1:989916/149‑1 (MQ=255)
aCGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAAt < 1:995637/149‑1 (MQ=255)
gTACCTAGAGTTTCATAACCTGCGAGGCAGGCGATAACCAGCGATCCGACACACATCATAAACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATcc < 1:251373/149‑1 (MQ=255)
tctaGTTTCATAACCCGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGATTATCGGCTATGCGGCCAAATAGCCACCCGCCTCTTGAGGGCACCAGGAGTc > 2:383731/3‑143 (MQ=255)
tataGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCgcag < 1:1219392/149‑1 (MQ=255)
cataGTTTCATAACCCGGGAGGCAGGAGATAACCAGCGATCCGACACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACTGCCTATTGGGCGCATCAGGAATCCCgcag < 1:915553/148‑1 (MQ=255)
ataGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGatacc > 2:191162/1‑139 (MQ=255)
taGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCgcagca > 1:336242/1‑149 (MQ=255)
gTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaa < 1:927033/149‑1 (MQ=255)
gTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaa > 1:88852/1‑149 (MQ=255)
tttCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaaa > 1:1043968/1‑149 (MQ=255)
tAACCTGGGAGGCAGGCGATAACCAGCGGTCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAGTCCTgcggcggg > 2:505683/1‑140 (MQ=255)
tAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAGCACATCATACACACCGATAACAGCCTCGAGTTTTTGCGACCATGTTTCTCGGCTATGCGGCCAAGTAGCCAACCGCCTATTGGGCGCGTGAGGAATACCgcaagaacaagaac > 1:231033/1‑138 (MQ=255)
tAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCAACAGGGAACCCACAGCaaa > 2:774004/1‑143 (MQ=255)
aaCCTGGGAGGCAGGCGATAAACAGCGATCCGAAACCCATCCTACCCACCGATAACTGCATCGATTTTTTGTGACCCTGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCaaaa < 2:646/143‑1 (MQ=255)
ccTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGGTAAACGCATCGCTTTTTTGCGACCATATTTATCGGCTATGCGGCCAAATAGCCAACCGCCCATTGGGCGCATCGGGAATCCCGCACCAAAAac > 2:345193/1‑143 (MQ=255)
tGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAacac < 2:225446/143‑1 (MQ=255)
gAGGCAGGCGCTAACCAGCGATCCGAAACACATCATACACACCGATAACAGCTTCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACctg < 2:1040019/143‑1 (MQ=255)
cgtcaagccatcaCCAGCGATCCGAACCGCCTCATACACACCGATGTCGGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCTAATAGCCAACCGCCGATTGGGCGTATCAGGAATCCCGCAGCAAAAACACctgc < 2:617752/131‑1 (MQ=255)
cggcagccGATAACCAGCTATCCGAAACACATCAGACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTg < 1:385258/148‑1 (MQ=255)
aggcaggcGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTg < 1:808947/149‑1 (MQ=255)
gcaggcGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTgta < 1:1184018/149‑1 (MQ=255)
caggcGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTgtag > 1:1097098/1‑149 (MQ=255)
gcaaTAACCAGCCATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTg < 2:467386/140‑1 (MQ=255)
cGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTgt < 2:226635/143‑1 (MQ=255)
cGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTagtagt > 1:761513/1‑149 (MQ=255)
aTAACCAGCGATCCGAAACACATCATACACGCCGGTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTg > 1:1288015/1‑149 (MQ=255)
aTAACCAGCGATCCGAAACACATCATACACCCCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCTCCTATTGGGCGCATCAGGAATCCCGCCGCAAAAACACCTGCTGTAGGTAGTAGTTg > 1:529964/1‑149 (MQ=255)
tAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGa < 1:609934/149‑1 (MQ=255)
aaCCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCCACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAg > 1:798916/1‑149 (MQ=255)
ccAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAgtc < 1:289873/149‑1 (MQ=255)
gccaTCCGAAACACTTCTTACTCACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCTGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGa < 2:553595/140‑1 (MQ=255)
cGATCCGAAACACATCATACACACCGATAACAGCCTCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGGGCATCGGGAATCCCGCAGCAAAACCAGCTGCTGTTTGTAGTAGTTGAg > 2:408921/1‑143 (MQ=255)
aTCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAgac > 2:6827/1‑141 (MQ=255)
aTCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTCATCGGCTATGCGGCCAAATGGCCAACCGCCTATTGGACGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGGCGTAGGTGAgtc > 2:438244/1‑143 (MQ=255)
cGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTc > 1:305548/1‑149 (MQ=255)
gAAACACACCATACACACCTATAACCGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTcc < 1:1246243/149‑1 (MQ=255)
aaaCCCATCATACACTCCGCTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTccc < 1:1020475/149‑1 (MQ=255)
catcatACACACCGATAACAGCATCGATTTTTTGCGACCATGTATAACAGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaag < 1:746542/149‑1 (MQ=255)
catcatACACACCGATAACAGCATCGATTATTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCGAACCGCCTATTGGGCGCATCAGGACTCCCGCAGCAAAAACACCCGCTATTTGTAGTAGTTGAGTCGACGTGTTCCCggaac > 1:796310/1‑148 (MQ=255)
cctACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAAGAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaaggga < 1:414347/147‑1 (MQ=255)
catACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaaggga > 1:307007/1‑149 (MQ=255)
atACACACCGATAACAGCATCCATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCggaagggaa < 1:451634/149‑1 (MQ=255)
cacacCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGgaagaa < 1:598005/149‑1 (MQ=255)
ccGATAACAGCATCGATTTCTTGCGACCCTGTTTACCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTCGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAtg < 1:85951/149‑1 (MQ=255)
cGATAACCGCCTCGATTTTTTCGGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTGGAGTCGTCGTGTTCCCGGAAGGgaaga < 2:375697/143‑1 (MQ=255)
aTACCAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACATCTGCTGTTTGTAGTAGTTAAGTCGGCGTGTTCCCGGAAGGGAAGAAGATGTgg < 1:718813/149‑1 (MQ=255)
aTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTgg < 1:1203804/149‑1 (MQ=255)
aTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTgg < 1:1201547/149‑1 (MQ=255)
aTAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCAGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGaagaag > 2:259819/1‑143 (MQ=255)
aCAGCATCGTTTTTTTGCGACCATTTTTATCGGCTATGCCGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAtg < 2:848030/143‑1 (MQ=255)
cAGCCTCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCAAACCGCCGATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTTTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGAtgt < 2:656896/143‑1 (MQ=255)
gCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTgg < 2:634310/143‑1 (MQ=255)
tCGATTTTTTGCGACCATGTTTAACGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTag > 1:683715/1‑149 (MQ=255)
ggttttttGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTTTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGCGAACAAGATGTTGGCaaa < 2:1073635/141‑1 (MQ=255)
aTTTTTTGCCACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGt < 1:991661/149‑1 (MQ=255)
ttttttGCGACCATGCTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTg < 1:1190358/149‑1 (MQ=255)
tgttGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGaa < 1:1065364/147‑1 (MQ=255)
tttGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTaga < 2:266569/143‑1 (MQ=255)
tGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAg < 1:1124301/149‑1 (MQ=255)
cGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGaa < 1:1015128/149‑1 (MQ=255)
gACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGaa < 2:1112861/143‑1 (MQ=255)
gACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAAc > 1:425159/1‑149 (MQ=255)
gACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGCAAGAAGATGTGGGCAAAGTAGAGTGaa < 2:1112828/143‑1 (MQ=255)
ccccATGTTTAGCGGTCATTCGCTCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGGTTGTAGTAGTGGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGaa < 2:793537/141‑1 (MQ=255)
cATGTTTATCGGGTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAg < 1:399983/149‑1 (MQ=255)
aTGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTAAGGAATCACGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGa > 2:539980/1‑143 (MQ=255)
aTGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGt < 1:1102935/149‑1 (MQ=255)
tcttcaTCGGCTACGCGGCCAAATAGCCAACCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTa < 1:589922/144‑1 (MQ=255)
gTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGGATCAGGAATCCCTCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAAc < 2:171323/143‑1 (MQ=255)
ttATCGGCAATGCGGCCAAATTGTCAACCGCCTGTGGGGCCCATCAAGAATCCCGCAGGAAGAACACCGGCTGTTTGTATTAGTCGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAc < 1:498759/149‑1 (MQ=255)
cGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAg < 1:210014/149‑1 (MQ=255)
gttATGCGGCCAAATAGCCAACCGCCTCTTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAACATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAc < 2:702802/141‑1 (MQ=255)
gCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGAc > 2:614595/1‑143 (MQ=255)
cTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGGAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACGTAGaag > 1:575340/1‑148 (MQ=255)
gCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGa < 1:870851/149‑1 (MQ=255)
gggCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGGAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGaa < 1:660821/148‑1 (MQ=255)
ggacAAACAGCCAACCGCCGATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAAc < 1:92477/146‑1 (MQ=255)
ggCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGaaa > 2:500776/1‑143 (MQ=255)
cgCCCAAGAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTGTGTAGTAGTTGAGTCGTCGGGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGacc < 1:92799/148‑3 (MQ=255)
aaaTAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAACAACACCGGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGACCGAGTAGACATAGCAATcca < 2:709269/143‑3 (MQ=255)
aaaTAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGACGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGCAATCGAACCACt > 1:67344/1‑149 (MQ=255)
gtAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAAc < 2:916815/142‑1 (MQ=255)
gCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGAcc > 1:855107/1‑149 (MQ=255)
cAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGACCGAGTAGCCATAGAAATCGAACCACTCAACCAg > 1:1118170/1‑149 (MQ=255)
cAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAg > 1:67043/1‑149 (MQ=255)
cAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAAACGAACCACTCGAACAg > 1:610683/1‑149 (MQ=255)
aaCCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGa > 1:1145409/1‑149 (MQ=255)
aaCCGCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGGGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGa > 1:512279/1‑149 (MQ=255)
ccGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGGTGAGTCGGCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGAc > 2:974372/1‑143 (MQ=255)
gCCTATTGGGCGCGTCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCa < 2:752236/143‑1 (MQ=255)
gCCTATCGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCa > 2:869680/1‑143 (MQ=255)
gCCTACTGGTCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTAc < 1:260194/149‑1 (MQ=255)
tATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCTACCCACTCGACCAGAt < 2:134660/143‑1 (MQ=255)
gggCGCATCAGGAATCCCGCAACAAAAACACCTGCTGATTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGCGAAGAAGATGTTGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACCGAACCAGACTAcc > 2:306322/1‑143 (MQ=255)
ggCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGAGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAagag > 1:300623/1‑149 (MQ=255)
gcgcATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGACCCACTCGACCAGATTACCTGAAGAgg > 1:899684/1‑149 (MQ=255)
gcgcATCAGGAATCCCGCAGCAAAAACACCTGCGGTTTGTAGTAGTTGAGTCGTCGTGTGCCCGGAAGGGGAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTg > 2:837478/1‑143 (MQ=255)
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GAGCCCACGTACCTATAGTTTCATAACCTGGGAGGCAGGCGATAACCAGCGATCCGAAACACATCATACACACCGATAACAGCATCGATTTTTTGCGACCATGTTTATCGGCTATGCGGCCAAATAGCCAACCGCCTATTGGGCGCATCAGGAATCCCGCAGCAAAAACACCTGCTGTTTGTAGTAGTTGAGTCGTCGTGTTCCCGGAAGGGAAGAAGATGTGGGCAAAGTAGAGTGAACAGAACGAGTAGACATAGAAATCGAACCACTCGACCAGATTACCTGAAGAGG > CP009273/2718736‑2719026
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
