Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A138 F1 I1 R1	17	163.5	10262604	95.7%	9821312	76.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	REL606	4,108,375	C→T	R43H (CGT→CAT)	metJ ←	transcriptional repressor protein MetJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	REL606	4,108,375	0	C	T	98.7%	622.0 / ‑1.9	153	R43H (CGT→CAT)	metJ	transcriptional repressor protein MetJ
Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (78/73); total (79/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01

Only 100 of 166 total aligned reads displayed.

TAAAGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCAC  >  REL606/4108304‑4108447

tAAAGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATgcgt                                                                      >  1:30420/1‑76 (MQ=255)

 aaaGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATgcgtg                                                                     >  2:441090/1‑76 (MQ=255)

 aaaGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATgcgtg                                                                     >  1:3372862/1‑76 (MQ=255)

  aaGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATgcgtgc                                                                    >  1:545453/1‑76 (MQ=255)

  aaGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATgcgtgc                                                                    >  1:1372620/1‑76 (MQ=255)

  aaGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATgcgtgc                                                                    >  2:1264036/1‑76 (MQ=255)

   aGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGAtgcgtgcg                                                                   >  1:2067818/1‑76 (MQ=255)

    ggCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGACgcgtgcgt                                                                  >  1:2668563/1‑76 (MQ=255)

      cATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTc                                                                <  1:4418675/76‑1 (MQ=255)

      cATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTc                                                                >  1:2890713/1‑76 (MQ=255)

      cATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTc                                                                <  1:2713799/76‑1 (MQ=255)

      cATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTc                                                                <  1:2347607/76‑1 (MQ=255)

       aTGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCa                                                               >  2:204167/1‑76 (MQ=255)

       aTGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCa                                                               >  2:3617156/1‑76 (MQ=255)

        tGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCAt                                                              >  2:1712196/1‑76 (MQ=255)

         gCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATc                                                             <  1:1783955/76‑1 (MQ=255)

         gCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATc                                                             >  1:1688582/1‑76 (MQ=255)

          cAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCg                                                            <  1:4831549/76‑1 (MQ=255)

           aGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCgg                                                           <  1:675570/76‑1 (MQ=255)

            gAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGt                                                          >  2:365322/1‑76 (MQ=255)

             aaaCGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTg                                                         <  2:1575322/76‑1 (MQ=255)

              aaCGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCCCCTGACGATGCGTGCGTTCATCGGTGa                                                        <  1:4514966/76‑1 (MQ=255)

              aaCGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGa                                                        <  2:2035422/76‑1 (MQ=255)

              aaCGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGa                                                        <  2:3367906/76‑1 (MQ=255)

              aaCGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGa                                                        >  1:473779/1‑76 (MQ=255)

              aaCGCTTCGCACAGCAGCTCGCTGTTGGAAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGa                                                        >  1:2204012/1‑76 (MQ=255)

               aCGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAg                                                       <  1:1889431/76‑1 (MQ=255)

                cGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAgg                                                      >  1:4130453/1‑76 (MQ=255)

                  cTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGAt                                                    >  2:2878279/1‑76 (MQ=255)

                  cTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGAt                                                    <  2:4910126/76‑1 (MQ=255)

                   ttCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGAtt                                                   >  2:672589/1‑76 (MQ=255)

                    tCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGAttt                                                  <  1:3820476/76‑1 (MQ=255)

                     cGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGACGCGTGCGTTCATCGGTGAGGAtttt                                                 <  1:2945669/76‑1 (MQ=255)

                       cacaGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTa                                               <  1:1008129/76‑1 (MQ=255)

                       cacaGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTa                                               <  1:61778/76‑1 (MQ=255)

                       cacaGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTa                                               <  2:548631/76‑1 (MQ=255)

                        acaGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTaa                                              >  2:4930477/1‑76 (MQ=255)

                        acaGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTaa                                              >  1:4049086/1‑76 (MQ=255)

                         cagcagCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAac                                             <  1:3452010/76‑1 (MQ=255)

                             agcTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCt                                         <  1:3145436/76‑1 (MQ=255)

                              gcTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCtt                                        >  2:4489749/1‑76 (MQ=255)

                              gcTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCtt                                        <  2:369311/76‑1 (MQ=255)

                              gcTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCtt                                        >  2:3467570/1‑76 (MQ=255)

                              gcTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCta                                        <  2:1156496/76‑2 (MQ=255)

                               cTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTa                                       >  1:3495176/1‑76 (MQ=255)

                               cTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTa                                       <  2:3952975/76‑1 (MQ=255)

                               cTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTa                                       <  2:1298105/76‑1 (MQ=255)

                               cTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTa                                       <  1:477859/76‑1 (MQ=255)

                               cTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTa                                       >  2:1439535/1‑76 (MQ=255)

                                tCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTaa                                      <  2:3921025/76‑1 (MQ=255)

                                 cGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAag                                     >  2:4601952/1‑76 (MQ=255)

                                 cGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAag                                     >  2:3405224/1‑76 (MQ=255)

                                 cGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAag                                     >  1:4913145/1‑76 (MQ=255)

                                 cGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAag                                     >  2:4586037/1‑76 (MQ=255)

                                 cGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAag                                     <  1:4593260/76‑1 (MQ=255)

                                  gCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAaga                                    >  1:940468/1‑76 (MQ=255)

                                  gCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAaga                                    >  2:4366088/1‑76 (MQ=255)

                                  gCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAaga                                    >  2:2151512/1‑76 (MQ=255)

                                   cTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGGTTTTTAACACCTTAagag                                   >  2:1349576/1‑76 (MQ=255)

                                   cTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAagag                                   <  1:4274791/76‑1 (MQ=255)

                                   cTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAagag                                   >  1:4915929/1‑76 (MQ=255)

                                   cTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAagag                                   >  1:3571132/1‑76 (MQ=255)

                                     gTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGa                                 >  2:3504849/1‑76 (MQ=255)

                                     gTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGa                                 >  1:573135/1‑76 (MQ=255)

                                     gTTGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGa                                 >  2:1630922/1‑76 (MQ=255)

                                       tGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAAt                               <  1:2826014/76‑1 (MQ=255)

                                       tGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAAt                               <  2:2892522/76‑1 (MQ=255)

                                       tGGTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAAt                               <  1:2849341/76‑1 (MQ=255)

                                       tGGTAGCGTGACGCAGGTTGTTCACCCGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAAt                               >  1:2564131/1‑76 (MQ=255)

                                        ggTAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATg                              <  2:32529/76‑1 (MQ=255)

                                          tAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGa                            <  1:5075708/76‑1 (MQ=255)

                                          tAGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGa                            >  2:2136896/1‑76 (MQ=255)

                                           aGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGaa                           <  1:4373844/76‑1 (MQ=255)

                                           aGCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGaa                           >  1:111124/1‑76 (MQ=255)

                                            gCGTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGaaa                          <  1:446381/76‑1 (MQ=255)

                                              gTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAAcc                        <  1:685617/76‑1 (MQ=255)

                                              gTGACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAAcc                        >  1:990598/1‑76 (MQ=255)

                                                gACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGt                      <  1:3367994/76‑1 (MQ=255)

                                                gACGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGt                      <  2:3782708/76‑1 (MQ=255)

                                                 aCGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTa                     <  1:822087/76‑1 (MQ=255)

                                                  cGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTaa                    >  2:2502635/1‑76 (MQ=255)

                                                  cGCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTaa                    <  1:4722692/76‑1 (MQ=255)

                                                   gCAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAAt                   <  1:1514114/76‑1 (MQ=255)

                                                    cAGGTTGTTCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATc                  >  2:3023827/1‑76 (MQ=255)

                                                       gttgttCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCttt               >  1:1466166/1‑76 (MQ=255)

                                                       gttgttCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCttt               <  2:4225327/76‑1 (MQ=255)

                                                        ttgttCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCtttt              >  1:1573808/1‑76 (MQ=255)

                                                         tgttCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCttttt             >  2:1500237/1‑76 (MQ=255)

                                                         tgttCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCttttt             <  1:4159377/76‑1 (MQ=255)

                                                            tCACCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGAc          >  1:4597043/1‑76 (MQ=255)

                                                              aCCTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACtt        <  1:3933200/76‑1 (MQ=255)

                                                               ccTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTg       >  2:4805448/1‑76 (MQ=255)

                                                                cTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACGCCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGt      >  1:1271123/1‑76 (MQ=255)

                                                                cTGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGt      <  2:5013064/76‑1 (MQ=255)

                                                                 tGACGATGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGtt     <  2:619398/76‑1 (MQ=255)

                                                                  gacgatGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTc    <  2:3063466/76‑1 (MQ=255)

                                                                  gacgatGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTc    >  1:1243241/1‑76 (MQ=255)

                                                                  gacgatGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTc    <  2:2798873/76‑1 (MQ=255)

                                                                   acgatgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCa   <  2:1002443/76‑1 (MQ=255)

                                                                    cgatgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCAc  <  2:3544476/76‑1 (MQ=255)

TAAAGGCATGCAGAAACGCTTCGCACAGCAGCTCGCTGTTGGTAGCGTGACGCAGGTTGTTCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCAC  >  REL606/4108304‑4108447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A