Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I3 R1
|
53 |
201.3 |
10250884 |
92.1% |
9441064 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,173,566 |
G→C |
R611G (CGC→GGC) |
parE ← |
DNA topoisomerase IV, subunit B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,173,566 | 0 | G | C | 97.8%
| 812.7
/ 0.9
| 233 | R611G (CGC→GGC) | parE | DNA topoisomerase IV, subunit B |
| Reads supporting (aligned to +/- strand): ref base G (3/2); new base C (124/103); total (128/105) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 234 total aligned reads displayed.
TTTGCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCAA > NC_000913/3173467‑3173661
|
tttGCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCg < 1:649168/100‑1 (MQ=255)
cccGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGCGCCTttc < 2:893572/100‑1 (MQ=255)
cccGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttc < 2:1111207/100‑1 (MQ=255)
gCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCg < 1:4636778/100‑1 (MQ=255)
cATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGcc < 1:2980252/100‑1 (MQ=255)
cATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGcc < 2:1593820/100‑1 (MQ=255)
cATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGcc > 2:4518795/1‑100 (MQ=255)
tCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcag > 1:3096516/1‑100 (MQ=255)
cTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagca > 1:4348105/1‑100 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag > 2:3707373/1‑100 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag < 2:2032506/100‑1 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag < 2:3744058/100‑1 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag < 1:4129435/100‑1 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGGTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag > 1:499972/1‑100 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCCCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag < 2:4917025/100‑1 (MQ=255)
gACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcaga > 1:2057909/1‑99 (MQ=255)
gggCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCatat > 1:1374093/1‑100 (MQ=255)
ggCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCCTCCGAGCCTTTCTTCGCCAGCAGCATATc < 1:1012075/100‑1 (MQ=255)
gCAATGTTGTTTCCTTTAAACCTCAATCGCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATcc < 2:1395211/100‑1 (MQ=255)
gCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGCCAGCAGCATATcc < 2:361400/100‑1 (MQ=255)
cAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCca < 2:1450954/100‑1 (MQ=255)
cAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCca < 1:2850377/100‑1 (MQ=255)
aTGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcatc < 2:5061611/100‑1 (MQ=255)
aTGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcatc > 1:1689056/1‑100 (MQ=255)
tGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcgtca < 2:1915481/100‑1 (MQ=255)
ttCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCatcatc < 1:1298567/100‑1 (MQ=255)
cTTTCCTTTGAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATcgc < 2:754239/100‑1 (MQ=255)
cTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATcgc > 1:4776165/1‑100 (MQ=255)
tttCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATcgcg > 2:3499730/1‑100 (MQ=255)
tCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTc > 2:169427/1‑100 (MQ=255)
ccTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCa < 1:529178/100‑1 (MQ=255)
cTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAg < 2:2616986/100‑1 (MQ=255)
cTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAg < 1:2309533/100‑1 (MQ=255)
tttAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGt > 2:2673892/1‑100 (MQ=255)
tAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTAc > 1:3808363/1‑100 (MQ=255)
aaCCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGc < 2:351574/100‑1 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 1:1922072/1‑100 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 2:3283811/1‑100 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 2:3966140/1‑100 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 2:217439/1‑100 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 2:218736/1‑100 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 1:3725451/1‑100 (MQ=255)
tCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGAt > 2:2841601/1‑100 (MQ=255)
gaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCg < 2:2412439/99‑1 (MQ=255)
aaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCg < 1:1336042/100‑1 (MQ=255)
aaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCg < 2:1099686/100‑1 (MQ=255)
aaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCg < 1:2581681/100‑1 (MQ=255)
aaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCg > 1:4027608/1‑100 (MQ=255)
tcCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCtt > 1:3139934/1‑100 (MQ=255)
tcGCCATGTCGCTTTTCTCTTGCACCCATTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtc < 2:3457300/99‑1 (MQ=255)
ccGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGAACGCTGATCGTCTtc > 1:2568492/1‑100 (MQ=255)
cGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtca < 1:2731671/100‑1 (MQ=255)
ccATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtcatc > 1:2781452/1‑100 (MQ=255)
aTGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTcatcat > 2:3826087/1‑100 (MQ=255)
tGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCTAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCatcatc < 2:3557906/100‑1 (MQ=255)
tGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCatcatc < 1:1777436/100‑1 (MQ=255)
tGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCatcatc < 1:4148507/100‑1 (MQ=255)
gTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCg > 1:4763465/1‑100 (MQ=255)
tCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTCCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGa < 1:3356013/100‑1 (MQ=255)
cGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGAt > 2:1886435/1‑100 (MQ=255)
cGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGAt < 2:4328760/100‑1 (MQ=255)
ccTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAg < 1:1094803/100‑1 (MQ=255)
ttCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCa < 1:3680507/100‑1 (MQ=255)
ttCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCa < 1:512685/100‑1 (MQ=255)
ctctTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTATGCTGATCGTCTTCATCATCGATAGTCAAc > 1:3494494/1‑100 (MQ=255)
ctctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAAc > 1:2511724/1‑100 (MQ=255)
ctctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAAc < 2:2268356/100‑1 (MQ=255)
tctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACt > 1:4389011/1‑100 (MQ=255)
tctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACt > 1:910906/1‑100 (MQ=255)
tctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACt > 2:4119637/1‑100 (MQ=255)
ctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTg < 2:2461127/100‑1 (MQ=255)
ctTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTg < 2:3159478/100‑1 (MQ=255)
ttGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCTTATCCATCATCGCGTCAGGACGCTGATCGTCTTCATCATCGATAGTCAACTGc < 2:4687419/100‑1 (MQ=255)
cAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCAcc < 1:2409880/100‑1 (MQ=255)
cAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCAcc > 2:3339989/1‑100 (MQ=255)
cAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCAcc < 2:2116561/100‑1 (MQ=255)
aCCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGAATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCCTCTGCACCAg > 2:4029143/1‑100 (MQ=255)
ccAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGa > 1:2201783/1‑100 (MQ=255)
gTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACgg > 2:45661/1‑100 (MQ=255)
gTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACgg > 1:3275654/1‑100 (MQ=255)
tGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCg > 2:3920137/1‑100 (MQ=255)
tGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCg > 2:576804/1‑100 (MQ=255)
tGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCg < 2:4969262/100‑1 (MQ=255)
gcggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGa > 1:5047873/1‑100 (MQ=255)
gcggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGa > 2:4778833/1‑100 (MQ=255)
gcggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGCCAGCACGCTGATCGCCTCCATCATCCATAGTCCACTGCACCAGACGGCGa > 2:4413629/1‑100 (MQ=255)
gcggcgATCTTCCGAGCCTTGCTTCGCCATCAGCATATCCATCATCGCGTCAGTACGCTGAGCTTCTGCATCATCTATAGTCAACTGCACCAGACGGCGa > 2:4077478/1‑100 (MQ=255)
cggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAg < 2:292331/100‑1 (MQ=255)
cggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAg > 2:866460/1‑100 (MQ=255)
gcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAgtg > 1:1243754/1‑100 (MQ=255)
ggtCTTCCGAGGCTTTCTTCGCCAGCAGCATATCAATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGtt > 2:4702272/3‑100 (MQ=255)
gATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGtt > 1:247700/1‑100 (MQ=255)
tCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCACCTGCCCCAGACGGCGAGTGTTCg < 2:3985816/100‑1 (MQ=255)
cTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCgg > 2:2810120/1‑100 (MQ=255)
ttCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGa > 1:217949/1‑100 (MQ=255)
tCCGAGCCTTTCTTCGCCAGCAGCATATCAATCATCGCGACAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGAt < 2:2357036/100‑1 (MQ=255)
ccGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATc > 2:1326893/1‑100 (MQ=255)
cGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCa > 1:4565761/1‑100 (MQ=255)
cGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCa > 1:5062638/1‑100 (MQ=255)
gAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCaa > 2:819338/1‑100 (MQ=255)
|
TTTGCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCAA > NC_000913/3173467‑3173661
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
