Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,173,566 |
G→C |
R611G (CGC→GGC) |
parE ← |
DNA topoisomerase IV, subunit B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,173,566 | 0 | G | C | 99.2%
| 427.8
/ ‑4.0
| 124 | R611G (CGC→GGC) | parE | DNA topoisomerase IV, subunit B |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (64/59); total (64/60) |
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 |
Only 100 of 124 total aligned reads displayed.
GCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCAA > NC_000913/3173470‑3173661
|
gCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCttt > 1:608501/1‑100 (MQ=255)
gCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCttt > 1:1368768/1‑100 (MQ=255)
cccGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttc > 1:925944/1‑100 (MQ=255)
cccGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttc > 2:1502003/1‑100 (MQ=255)
cccGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttc > 2:1502005/1‑100 (MQ=255)
cccGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttc > 1:1610568/1‑100 (MQ=255)
cGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttctt < 2:1305896/100‑1 (MQ=255)
ggCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTttcttc < 1:267514/100‑1 (MQ=255)
cATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGcc < 2:1209436/100‑1 (MQ=255)
cATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGcc < 2:790106/100‑1 (MQ=255)
cATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCACCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGcc < 2:1362016/100‑1 (MQ=255)
aTCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCca > 1:241348/1‑100 (MQ=255)
aTCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCca < 2:892587/100‑1 (MQ=255)
aTCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCca > 1:2486823/1‑100 (MQ=255)
tCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcag < 1:1859444/100‑1 (MQ=255)
tCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcag > 2:317329/1‑100 (MQ=255)
ccTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagc > 1:1607303/1‑100 (MQ=255)
cTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagca > 1:2202114/1‑100 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag > 1:11472/1‑100 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag < 1:2493963/100‑1 (MQ=255)
tGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcag > 1:1469119/1‑100 (MQ=255)
tGACCGGGAAATGTTCTTTCCTTTAAACCTCACTCTCCGCCATGTCGCCTTTCTCTTGCCACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCcagcat < 2:75700/100‑2 (MQ=255)
cgtgCAATGTTCTTTCCTTGAAACCTCAAGCTCGGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTGCCGAGCCTTTCTTCGCCAGCAGCata < 2:2181570/97‑1 (MQ=255)
ggCAATGTTCTTTCCTTTAAACCTCAGTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATc < 2:1149221/100‑1 (MQ=255)
ggCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATc > 2:2024731/1‑100 (MQ=255)
cAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCca < 2:1878951/100‑1 (MQ=255)
aaTGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcat > 1:847801/1‑100 (MQ=255)
tGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcatca > 2:705691/1‑100 (MQ=255)
tGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcatca < 2:544083/100‑1 (MQ=255)
gTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCcatcat > 1:603117/1‑100 (MQ=255)
ttCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCatcatc < 2:344125/100‑1 (MQ=255)
ttCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCatcatc < 1:484988/100‑1 (MQ=255)
tttCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATcgcg < 1:2222417/100‑1 (MQ=255)
ttCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGt > 2:1279844/1‑100 (MQ=255)
tCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTc < 1:1844723/100‑1 (MQ=255)
tCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTc > 1:133267/1‑100 (MQ=255)
ccTTTAAACCTCGATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCa > 1:1078489/1‑100 (MQ=255)
ccTTTAAACCTCAATCTCCGCCATGTCGCCTTTCCCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCCTACCCATCATCGCGCCa > 2:1074615/1‑100 (MQ=255)
cTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCCTCATCGCGTCAg > 2:1502925/1‑100 (MQ=255)
cTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAg < 2:1130435/100‑1 (MQ=255)
cTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAg > 1:1116812/1‑100 (MQ=255)
ttAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTa < 2:1077217/100‑1 (MQ=255)
ttAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTa > 1:1417570/1‑100 (MQ=255)
aCCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCt < 1:126667/100‑1 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 2:283472/1‑100 (MQ=255)
ccTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTg > 1:89422/1‑100 (MQ=255)
tCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGAt < 2:632592/100‑1 (MQ=255)
tCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCACTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGAt < 2:2376379/100‑1 (MQ=255)
tCAATCGCCGCCATGTCGGCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGAt > 1:2199484/1‑100 (MQ=255)
aaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCCTCATCGCGTCAGTACGCTGATCg > 2:2588810/1‑100 (MQ=255)
aaTCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCg < 1:880840/100‑1 (MQ=255)
tcCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCtt > 2:544570/1‑100 (MQ=255)
accGCCATGACGCCCCTCTCATCCAAACAGTTGCCGCGATCTCCCGGGCCTTTTTTCGACCGGAGCATCTCCATCCTCTCGTTAGTACGCTGATCGTCtt < 2:2593075/99‑1 (MQ=255)
ccGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtc > 2:807509/1‑100 (MQ=255)
cGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtca < 2:571210/100‑1 (MQ=255)
cGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtca < 2:909992/100‑1 (MQ=255)
cGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtca > 1:1641122/1‑100 (MQ=255)
cGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtca < 1:853198/100‑1 (MQ=255)
gCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtcat > 1:2030773/1‑100 (MQ=255)
gCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTAAGTACGCTGATCGTCTtcat > 2:744820/1‑100 (MQ=255)
ccATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtcatc < 2:1222572/100‑1 (MQ=255)
ccATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTtcatc < 2:1222565/100‑1 (MQ=255)
aTGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCCTcatcat < 2:217431/100‑1 (MQ=255)
tGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCatcatc < 2:1137015/100‑1 (MQ=255)
tGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCatcatc < 1:821258/100‑1 (MQ=255)
tCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGa > 2:1975109/1‑100 (MQ=255)
cGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGAt > 1:2606134/1‑100 (MQ=255)
cGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGAt > 2:363596/1‑100 (MQ=255)
cGCATTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTCTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGACCGTCTTCATCATCGAt > 2:1077138/1‑100 (MQ=255)
ccTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAg > 2:926637/1‑100 (MQ=255)
ccTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAg > 1:244663/1‑100 (MQ=255)
ccTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAg < 2:1237787/100‑1 (MQ=255)
ccTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGCCAGTACGCTGATCGTCTTCATCATCGATAg > 2:926897/1‑100 (MQ=255)
cTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGt > 1:2349838/1‑100 (MQ=255)
ttGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGc > 2:2358779/1‑100 (MQ=255)
ttGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGc < 2:213772/100‑1 (MQ=255)
tGCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCa < 2:1170984/100‑1 (MQ=255)
gCAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCAc < 1:1599465/100‑1 (MQ=255)
ctaCCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCTTCTTCATCATCGATAGTCACCTGCAcc < 2:2581217/98‑1 (MQ=255)
cAAGCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCAcc > 2:2382576/1‑100 (MQ=255)
cAACCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCAcc < 1:673682/100‑1 (MQ=255)
aaCCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCa < 1:1526870/100‑1 (MQ=255)
aCCAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAg > 2:456343/1‑100 (MQ=255)
ccAGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGa < 1:990843/100‑1 (MQ=255)
aGTTGCGGCGATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACg > 1:87857/1‑100 (MQ=255)
tGCGGCGATCTTCCGTGCCTTTCTTCGCCATGAGCATATCGAACATCGGGTCAGTACGCGGAACATCTTCATCATCGATAGTCAACTGCACCAGACGGCg < 2:2534211/100‑1 (MQ=255)
cggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCCGACGGCGAg > 1:21291/1‑100 (MQ=255)
cggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAg < 2:190222/100‑1 (MQ=255)
cggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAg > 2:2313477/1‑100 (MQ=255)
cggcgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCACCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAg < 1:774595/100‑1 (MQ=255)
cgATCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAgtgt < 1:1897661/100‑1 (MQ=255)
aTCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTc > 2:710236/1‑100 (MQ=255)
tCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGCTCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCg < 2:1643397/100‑1 (MQ=255)
tCTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCg < 1:43514/100‑1 (MQ=255)
cTTCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCgg > 1:2636672/1‑100 (MQ=255)
tCCGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGAt > 2:2531291/1‑100 (MQ=255)
ccGCGCCTTCCTTGGCCAGCAGCATATCCATCAGCGCGTTCGTACGCTGATCGCCTTCTTCATCGATAGTCAACTGCACCAGGCGGCGAGTGTTCGGCTc < 2:1423526/100‑1 (MQ=255)
cGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCa > 2:1163301/1‑100 (MQ=255)
cGAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCa > 2:1584733/1‑100 (MQ=255)
gAGCCTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCaa < 2:711372/100‑1 (MQ=255)
|
GCCCGGCCATCCTGACCGGGCAATGTTCTTTCCTTTAAACCTCAATCTCCGCCATGTCGCCTTTCTCTTGCAACCAGTTGCGGCGATCTTCCGAGCGTTTCTTCGCCAGCAGCATATCCATCATCGCGTCAGTACGCTGATCGTCTTCATCATCGATAGTCAACTGCACCAGACGGCGAGTGTTCGGATCAA > NC_000913/3173470‑3173661
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
