Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,479,233 |
A→C |
S459A (TCT→GCT) |
kefB ← |
potassium:proton antiporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,479,233 | 0 | A | C | 97.6%
| 727.2
/ 3.9
| 212 | S459A (TCT→GCT) | kefB | potassium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base A (1/4); new base C (122/85); total (123/89) |
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01 |
Only 100 of 218 total aligned reads displayed.
GCGGAAAGTGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGAACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACGGT > NC_000913/3479137‑3479329
|
gCGGAAAGTGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACg < 1:4202680/100‑1 (MQ=255)
ggAAAGTGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTa > 1:1507418/1‑100 (MQ=255)
gTGCTGTTGGCATATTTCTACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGa > 2:1549067/1‑100 (MQ=255)
gTGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCCGCACGTAAAAGa > 2:4783936/1‑100 (MQ=255)
gTGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGa > 2:503864/1‑100 (MQ=255)
tGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGAt > 1:1567288/1‑100 (MQ=255)
gCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATc > 2:3069806/1‑100 (MQ=255)
cTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCg < 2:3442216/100‑1 (MQ=255)
cTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACCCAGCGGCCTCTGCACCCGCAGCTCGTAAAAGATCg > 1:1429370/1‑100 (MQ=255)
cTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACCATATACTCAGCGGCCTCTGCACGCGCAGCACGTAAACGATCg > 2:1194744/1‑100 (MQ=255)
tGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTACTGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGa > 2:4847892/1‑100 (MQ=255)
tGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGa < 1:5159999/100‑1 (MQ=255)
tGTTGGCACATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCCGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGa < 2:4417688/100‑1 (MQ=255)
ttGGCATATTTCCGCCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGAcc < 2:3175972/100‑1 (MQ=255)
tGGCATACTACCACTCGCTTCATGTTGTCTTGCGGCACGTTGCACGTAATGATCATAGAGTCAGCGGCCTCTTCACCCGCAGCACGTAAAAGATCGACCt > 2:603720/1‑100 (MQ=255)
gCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGc > 1:4306538/1‑100 (MQ=255)
cATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCg < 2:2612321/100‑1 (MQ=255)
cATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCg < 1:3678926/100‑1 (MQ=255)
cATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCg > 1:4330464/1‑100 (MQ=255)
tatTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTg > 1:5006095/1‑100 (MQ=255)
atTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTgg > 1:2835493/1‑100 (MQ=255)
atTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTgg > 2:157330/1‑100 (MQ=255)
atTTCCACAAACTTCATGGTGCATTCCGCCTCATTACAGGTAATAACGAGACACTCAGCGGTCACTGCACAACCAGCACGTAAAAGATCGACCTGCGTgg < 2:1237579/100‑1 (MQ=255)
tCCGCCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGt > 1:4282572/1‑100 (MQ=255)
tCCACCAGCATCATGGTGTCTTCTGGCTCGTTACAGGTAATGCCGATAGACTCAGCGGCCGCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGt < 1:4852456/100‑1 (MQ=255)
ccaccaGCTTCATGGTGTCTTCCGGCTCTTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAAATCGACCTGCGTGGCGTc < 2:842307/100‑1 (MQ=255)
accaGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGc > 1:5467624/1‑100 (MQ=255)
ccaGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGcc > 1:2919887/1‑100 (MQ=255)
caGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCg < 2:1284882/100‑1 (MQ=255)
ttCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGttaa > 2:1406819/1‑97 (MQ=255)
tCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGtaata > 2:92559/1‑100 (MQ=255)
tGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAAc > 1:1761438/1‑100 (MQ=255)
tGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAAc > 2:2143225/1‑100 (MQ=255)
ggTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGTACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACt > 2:4256785/1‑100 (MQ=255)
tgtCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACttt < 1:4595088/100‑1 (MQ=255)
gtCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTg < 2:2096871/100‑1 (MQ=255)
gtCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTg < 2:2892355/100‑1 (MQ=255)
tCTTCCGGCTCGTTACAGGTAGTGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGt > 1:2647864/1‑100 (MQ=255)
tCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGt > 1:1033531/1‑100 (MQ=255)
cTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTa > 1:1823829/1‑100 (MQ=255)
ttCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAg > 1:2499941/1‑100 (MQ=255)
ttCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAg < 1:1672627/100‑1 (MQ=255)
ttCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAg < 2:3764160/100‑1 (MQ=255)
tCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGc > 2:1716766/1‑100 (MQ=255)
tCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGc < 2:1001641/100‑1 (MQ=255)
ccGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGcc < 1:1913601/100‑1 (MQ=255)
ggCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGt > 1:4410119/1‑100 (MQ=255)
ggCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGt > 1:3735755/1‑100 (MQ=255)
gCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTa < 2:3979664/100‑1 (MQ=255)
gCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTa < 2:1488314/100‑1 (MQ=255)
tCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTAtt < 1:4042653/100‑1 (MQ=255)
cGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTAttt > 1:112097/1‑100 (MQ=255)
gTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTa > 2:2290236/1‑100 (MQ=255)
ttACAGGTAATGACGATAGACTCAGAGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTAc > 2:4382670/1‑100 (MQ=255)
tACAGGTAATGACGATGGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACg < 2:1860109/100‑1 (MQ=255)
tACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACg < 1:520235/100‑1 (MQ=255)
caaGGTAAGGGCGATAGACTCAGCGGCCTCTGCACCCGCAGCACTTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGc < 2:4647465/98‑1 (MQ=255)
aCAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGc < 2:2350483/100‑1 (MQ=255)
cAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCa < 2:2809631/100‑1 (MQ=255)
ggTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATc > 1:3374248/1‑100 (MQ=255)
ggTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATc > 2:4060359/1‑100 (MQ=255)
ggTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATc > 1:3598355/1‑100 (MQ=255)
ggTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATc > 1:261880/1‑100 (MQ=255)
tAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAg < 1:3526532/100‑1 (MQ=255)
tGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGtt < 1:711827/100‑1 (MQ=255)
tGACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGtt > 1:5550186/1‑100 (MQ=255)
gACGATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTa > 1:2209477/1‑100 (MQ=255)
gATAGACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACg < 2:4936363/100‑1 (MQ=255)
gACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGgcgc > 1:1014705/1‑100 (MQ=255)
gACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGgcgc > 1:5024159/1‑100 (MQ=255)
gACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGgcgc > 1:5435173/1‑100 (MQ=255)
gACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGgcgc > 1:663240/1‑100 (MQ=255)
gACTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGgcgc < 1:4890532/100‑1 (MQ=255)
aCTCAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCt < 2:3664017/100‑1 (MQ=255)
cTCATCGGCCGCTGCACCCGCAGCACGTAAAAGATCGATCTGCGTGGCGTCGCCGTAGTAAACATTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTg < 2:4556695/100‑1 (MQ=255)
cAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGat < 1:3066976/100‑1 (MQ=255)
cAGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAAATCTGTAGCCGTAATTGCGCATCAGGTTAACGGCGCTGat > 2:4103923/1‑100 (MQ=255)
cAGCGGCCTCTGCACCCGCAGCACGGAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTCTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGat > 2:2178465/1‑100 (MQ=255)
aGCGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGata > 1:3181637/1‑100 (MQ=255)
cGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATc > 1:1259460/1‑100 (MQ=255)
cGGCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATc > 1:3017446/1‑100 (MQ=255)
gCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATccc > 1:2000395/1‑100 (MQ=255)
gCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATccc < 2:3210370/100‑1 (MQ=255)
gCCTCTGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATccc < 2:523981/100‑1 (MQ=255)
ccTCTGCACCCGCAGAACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCg > 1:2368450/1‑100 (MQ=255)
ctctGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGc < 2:2698641/100‑1 (MQ=255)
tctGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCt > 1:3262204/1‑100 (MQ=255)
tctGCACCCGCAGAACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCt < 1:3957803/100‑1 (MQ=255)
ctGCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTc < 2:1915433/100‑1 (MQ=255)
gCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCa > 1:241732/1‑100 (MQ=255)
gCACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCa < 1:1656756/100‑1 (MQ=255)
cagccGCAGAACGTAAAAGATCGACCTGCGGGGAGTCGCTGTAATAAAATTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAg < 2:2037901/97‑1 (MQ=255)
cACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAg > 2:3338966/1‑100 (MQ=255)
cACCCGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAg > 2:3522282/1‑100 (MQ=255)
cccGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCa < 1:2772021/100‑1 (MQ=255)
cGCAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACg < 2:1432194/100‑1 (MQ=255)
gcagcaTGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACgg < 2:3001920/100‑1 (MQ=255)
gcagcaCGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACgg < 1:4816018/100‑1 (MQ=255)
cAGCACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACGGt < 2:358293/100‑1 (MQ=255)
cAGAACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACGGt < 1:1364473/100‑1 (MQ=255)
|
GCGGAAAGTGCTGTTGGCATATTTCCACCAGCTTCATGGTGTCTTCCGGCTCGTTACAGGTAATGACGATAGACTCAGCGGCCTCTGCACCCGCAGAACGTAAAAGATCGACCTGCGTGGCGTCGCCGTAATAAACTTTGTAGCCGTATTTACGCATCAGGTTAACGGCGCTGATATCCCGCTCCAGCACGGT > NC_000913/3479137‑3479329
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
