Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,854,496 |
A→C |
Q53H (CAA→CAC) |
fhlA → |
formate hydrogenlyase transcriptional activator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,854,496 | 0 | A | C | 90.2%
| 405.8
/ 24.3
| 143 | Q53H (CAA→CAC) | fhlA | formate hydrogenlyase transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base A (7/7); new base C (55/74); total (62/81) |
| Fisher's exact test for biased strand distribution p-value = 7.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 147 total aligned reads displayed.
ATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTACG > NC_000913/2854400‑2854591
|
gttGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAcgcg < 2:3155158/99‑1 (MQ=255)
aTTGCAGCAGCCCGATCTGGCCTCGCTGTGTGTGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAcgcg > 2:3600586/1‑100 (MQ=255)
aTTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAcgcg > 2:2577099/1‑100 (MQ=255)
aTTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCGGCGCTCGGCGACCACGGGGCTATTGTGTTGTGGCAcgcg > 2:764580/1‑100 (MQ=255)
ttGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACgcgc < 1:3796428/100‑1 (MQ=255)
ttGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACgcgc < 2:3603464/100‑1 (MQ=255)
tGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCa < 2:3609756/100‑1 (MQ=255)
gcagcaGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAg < 1:269077/100‑1 (MQ=255)
gcagcaGCCCGATCTGGCCTCGCTGTGTGAGGCTCTCTCGAAACTGGTAGAGCGCTCTGCGCTCGCCGATAACGCGGCTATTGTGTTGTGGCACGCGCAg > 2:3758131/1‑100 (MQ=255)
cagcagCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGa > 1:2330800/1‑100 (MQ=255)
agcagcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGAc < 1:2782201/100‑1 (MQ=255)
gcagcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACt < 2:3858219/100‑1 (MQ=255)
cagcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTc < 2:645951/100‑1 (MQ=255)
agcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCa < 2:1808435/100‑1 (MQ=255)
agcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCGCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCa < 1:3473034/100‑1 (MQ=255)
gcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCaa > 1:1949154/1‑100 (MQ=255)
gcCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCaa > 2:767096/1‑100 (MQ=255)
gcCCGAGCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGTTAAAGCGTACTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAAACTCaa > 2:3762453/1‑100 (MQ=255)
cGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGt < 2:1449201/100‑1 (MQ=255)
cGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGt < 1:3315057/100‑1 (MQ=255)
gATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGtt < 1:2479645/100‑2 (MQ=255)
gATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTg < 1:804307/100‑1 (MQ=255)
gATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTg < 1:1520069/100‑1 (MQ=255)
tCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCg < 1:2451270/100‑1 (MQ=255)
tCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCg < 2:46776/100‑1 (MQ=255)
cTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGt > 1:2999864/1‑100 (MQ=255)
ggCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCt > 1:745/1‑100 (MQ=255)
gCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCtt < 1:1601042/100‑1 (MQ=255)
gCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCCTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCtt > 2:1916772/1‑100 (MQ=255)
ccTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCtta > 1:1898300/1‑100 (MQ=255)
ccTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGCCTATGGTGTTGTGGCACGCGCAGACGCAACGCGCGTCtta > 2:3378002/1‑100 (MQ=255)
cTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTTTGGCACGCGCAGACTCACCGTGCGTCttat > 2:3400230/1‑100 (MQ=255)
gCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTAc < 2:2776551/100‑1 (MQ=255)
gCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGACGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACCCAACGTGCGTCTTATTAc > 2:3786109/1‑100 (MQ=255)
cTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTAcg < 2:1291311/100‑1 (MQ=255)
tgAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTAcgcgtcg > 2:3922657/1‑100 (MQ=255)
gAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGATATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTAcgcgtcgc > 2:3841577/1‑100 (MQ=255)
aGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTAcgcgtcgcg < 1:3804583/100‑1 (MQ=255)
aGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTAcgcgtcgcg < 2:198622/100‑1 (MQ=255)
gCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTg < 1:3923390/100‑1 (MQ=255)
gCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTg < 1:2268425/100‑1 (MQ=255)
tttCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGaaaa < 1:3681408/100‑1 (MQ=255)
tCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAg < 1:2068151/100‑1 (MQ=255)
tCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAg < 1:2786635/100‑1 (MQ=255)
ncAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCGACGTGCGTCTTATTACGCGTCGCGTGTAAAAGac > 1:3263098/2‑100 (MQ=255)
gCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGac > 2:2155658/1‑100 (MQ=255)
gCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGac < 1:3838922/100‑1 (MQ=255)
cAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGaca > 2:357054/1‑100 (MQ=255)
cTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACAccc < 2:2549278/100‑1 (MQ=255)
tGGTAAAGCGTTGTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACAcccc < 2:2828105/100‑1 (MQ=255)
tGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACAcccc > 1:2688480/1‑100 (MQ=255)
ggTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACAccccc > 1:1601847/1‑100 (MQ=255)
ggTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACAccccc < 2:2445572/100‑1 (MQ=255)
ggTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACAccccc > 2:3641369/1‑100 (MQ=255)
ggTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGAAAGAGCAGACTAAACGTGCGTATTATTAAGAGAAGAGTGAAAAAGACAccccc < 2:158262/100‑1 (MQ=255)
gTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCa > 1:2435186/1‑100 (MQ=255)
aaaGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCAtt > 2:135931/1‑100 (MQ=255)
aGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGGTGTGGCACGCGCAGACTCCGCGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTaa < 2:1472672/100‑1 (MQ=255)
gTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAata < 1:465540/100‑1 (MQ=255)
tCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGGCTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATg > 2:693724/1‑100 (MQ=255)
cTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGa < 1:2189314/100‑1 (MQ=255)
cTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGa < 1:1271129/100‑1 (MQ=255)
tGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGaa < 2:3956537/100‑1 (MQ=255)
gcgcTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAg > 2:3905264/1‑100 (MQ=255)
gcgcTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAg > 1:3217083/1‑100 (MQ=255)
cgcTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGa < 1:1829125/100‑1 (MQ=255)
cgcTCGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGa > 2:2347588/1‑100 (MQ=255)
cgacGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGaa < 1:1745050/97‑1 (MQ=255)
cGCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCACATTAAATATGAAGACGaa > 1:3931097/1‑100 (MQ=255)
gCCGACAACGCGGCTATTGTGTTGTGGGAAGCGCAGACTCAACGTGCCTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGaaa < 2:271244/100‑1 (MQ=255)
gCCGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGaaa > 2:1570314/1‑100 (MQ=255)
ccGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAAc < 1:549995/100‑1 (MQ=255)
ccGACAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAAc < 1:3835548/100‑1 (MQ=255)
cAACGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGtt > 1:917341/1‑100 (MQ=255)
aCGCGGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCt < 1:3369026/100‑1 (MQ=255)
aCGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCt < 2:1514341/100‑1 (MQ=255)
cgcgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATCTGAAGACGAAACTGTTCTg > 2:1700390/1‑100 (MQ=255)
cgcgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAGGACGAAACTGTTCTg > 1:2860524/1‑100 (MQ=255)
cgcgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTg > 1:948833/1‑100 (MQ=255)
cgcgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTg > 2:875848/1‑100 (MQ=255)
gcgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTgg < 2:3444225/100‑1 (MQ=255)
gcgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTgg < 1:3498337/100‑1 (MQ=255)
cgGCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGc < 2:928985/100‑1 (MQ=255)
ggCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGca > 1:1207323/1‑100 (MQ=255)
ggCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGca < 2:118459/100‑1 (MQ=255)
gCTATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGcac > 1:142996/1‑100 (MQ=255)
tATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCacac < 2:2731366/100‑1 (MQ=255)
tATTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCacac < 1:3286708/100‑1 (MQ=255)
aTTGTGTTGTGGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACg > 1:2217552/1‑100 (MQ=255)
ttgtgttgtgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACgg > 2:103277/1‑100 (MQ=255)
ttgtgttgtgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACgg > 2:2986478/1‑100 (MQ=255)
ttgtgttgtgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACgg > 2:2986826/1‑100 (MQ=255)
ttgtgttgtgGCACGCGCAGACCCAGCGTTCCTCTTATTTCGCGTCGCTTGAAAAAGACACCCCCATTAAATATGAAGGCGAAGCTGTTCTGGcaaaggc < 2:2839930/100‑6 (MQ=255)
tgttgtgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTcc > 1:2986874/1‑100 (MQ=255)
tgtgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGt < 2:3924108/100‑1 (MQ=255)
tgtgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGt < 1:1683755/100‑1 (MQ=255)
tgGCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTAc < 1:123914/100‑1 (MQ=255)
ggCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGANGAAACTGTTCTGGNACACGGTCCGGTACg > 2:1944969/1‑100 (MQ=255)
ggCACGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTACg > 2:358086/1‑100 (MQ=255)
ggCAAGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTACg > 2:677145/1‑100 (MQ=255)
|
ATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTACG > NC_000913/2854400‑2854591
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
