Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,644,167 |
T→G |
E339A (GAA→GCA) |
prlC ← |
oligopeptidase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,644,167 | 0 | T | G | 97.5%
| 389.1
/ ‑0.7
| 122 | E339A (GAA→GCA) | prlC | oligopeptidase A |
| Reads supporting (aligned to +/- strand): ref base T (3/0); new base G (58/61); total (61/61) |
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-01 |
Only 100 of 145 total aligned reads displayed.
TAACCACTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTTCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTTGTG > NC_000913/3644072‑3644263
|
aCCACTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTgt > 1:307763/1‑100 (MQ=255)
ccACTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTgta < 1:1507346/100‑1 (MQ=255)
cACTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTgtag < 1:276765/100‑1 (MQ=255)
cACTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTgtag < 2:1108924/100‑1 (MQ=255)
aCTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTgtagt > 2:2939005/1‑100 (MQ=255)
cAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGc < 1:783513/100‑1 (MQ=255)
cAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCCGTAGTAAGc < 1:2090248/100‑1 (MQ=255)
aaaCAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCg > 1:2281/1‑100 (MQ=255)
cAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGata < 1:2051333/100‑1 (MQ=255)
ggCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATc > 1:3636947/1‑100 (MQ=255)
ggCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATc < 1:446016/100‑1 (MQ=255)
ggCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATc > 1:2770303/1‑100 (MQ=255)
ggCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATc > 1:1615138/1‑100 (MQ=255)
ggCCGTTAACCGCTTTGTTATGCGGGAAGTACGGACGCAGCTATTCGTCACTGATGCTGTAGCGGTGATGTTTTTGTTTTGCGCTGTAGTAAGCGatagc > 1:3478302/1‑98 (MQ=255)
ccGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATccc < 2:316928/100‑1 (MQ=255)
cGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCa > 1:2359919/1‑100 (MQ=255)
gTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCAc > 1:312027/1‑100 (MQ=255)
gTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCAc < 2:2446750/100‑1 (MQ=255)
gTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCAc < 1:2194974/100‑1 (MQ=255)
gTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCAc < 1:639163/100‑1 (MQ=255)
gTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCAc < 1:2607293/100‑1 (MQ=255)
aaCCGCTTTGTTTTCCGGGAAGTACTGACGCAGCTGTCCGTCACTGATGTTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCCCGGc < 2:1309866/100‑1 (MQ=255)
aCCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCt > 1:1699494/1‑100 (MQ=255)
aCCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCt > 1:2786782/1‑100 (MQ=255)
ccGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTg > 2:3889422/1‑100 (MQ=255)
gCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCa < 2:672074/100‑1 (MQ=255)
gCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCa < 2:671516/100‑1 (MQ=255)
gCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCa < 2:2937087/100‑1 (MQ=255)
gCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTATTGCGCTGTAGTAAGCGATATCCCACGGCTGCa > 1:4038153/1‑100 (MQ=255)
ttGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACt < 1:909335/100‑1 (MQ=255)
ntGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGCGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACt > 1:1187573/2‑100 (MQ=255)
gTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCa < 1:3945720/100‑1 (MQ=255)
ttttCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCAt < 1:1497422/100‑1 (MQ=255)
ttttCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCAt > 1:1667381/1‑100 (MQ=255)
ttCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCg < 1:4001905/100‑1 (MQ=255)
cGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATGTCCCACGGCTGCAACTCATCGACg < 2:2932226/100‑1 (MQ=255)
cGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACg < 1:2982479/100‑1 (MQ=255)
cGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACg < 1:476472/100‑1 (MQ=255)
gggAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGc > 1:310366/1‑100 (MQ=255)
ggAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGcc < 1:780081/100‑1 (MQ=255)
aGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCaaa > 2:804044/1‑100 (MQ=255)
gTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAAt > 2:1126823/1‑100 (MQ=255)
agggACGCCGCTCTCCGTAGCTGATGCTGTAGAGGTGCTGTTTTTGTTTTGAGCTGTAGTGAGCGCCACCCCACGGCTGCAACTCATCGACGCCAAATTc < 1:3319653/98‑1 (MQ=255)
aCGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTc > 2:3959590/1‑100 (MQ=255)
aCGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTACTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTc > 2:1540508/1‑100 (MQ=255)
cGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCg < 1:134816/100‑1 (MQ=255)
cGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCg > 2:3787128/1‑100 (MQ=255)
ggACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCgg < 2:306436/100‑1 (MQ=255)
gACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGc < 1:1967594/100‑1 (MQ=255)
gACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGc < 1:2581911/100‑1 (MQ=255)
cGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCtt > 2:1159638/1‑100 (MQ=255)
cGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCAGCGACGCCAAATTCGGCtt > 1:3823239/1‑100 (MQ=255)
cAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTg < 1:1988111/100‑1 (MQ=255)
aGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTgg < 1:2275823/100‑1 (MQ=255)
gCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGc > 2:178902/1‑100 (MQ=255)
gCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGc < 2:188822/100‑1 (MQ=255)
gCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGc > 1:292795/1‑100 (MQ=255)
cTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCa < 1:2547788/100‑1 (MQ=255)
gTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCaaa > 2:1259444/1‑100 (MQ=255)
ttCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAg < 1:524967/100‑1 (MQ=255)
cGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCGCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGc > 2:692923/1‑100 (MQ=255)
cGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGc > 1:3985564/1‑100 (MQ=255)
tCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCAc < 1:2549930/100‑1 (MQ=255)
cACTGATGCTGTAGAGGTGCTGTTTTTTTTTTTTTTTTTTGTAAGCGATAGCCCACGGCTGCAACTCCTCGACGCCAGATTCGGCTTTGGCTAAgccccg > 2:2075474/1‑95 (MQ=255)
tGATGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCaa > 2:3631845/1‑100 (MQ=255)
gATGCTGTAGAGGTGCTGTTTCTGGTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCTACGCCAAATTCGGCTCTGGCCAAGGCACGCAAt > 2:1556989/1‑100 (MQ=255)
aTGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAAtt < 2:3743726/100‑1 (MQ=255)
tGCTGTAGAGGTGCTGTTTTTGTTTTTCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGAAATTg > 1:1934833/1‑100 (MQ=255)
tGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCGCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTg > 2:2657124/1‑100 (MQ=255)
tGCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTg < 1:3842478/100‑1 (MQ=255)
gCTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTgc > 2:373190/1‑100 (MQ=255)
cTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTgcg < 2:146320/100‑1 (MQ=255)
cTGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTgcg < 1:1118856/100‑1 (MQ=255)
tGTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTgcgc > 1:4063464/1‑100 (MQ=255)
gTAGAGGTGCTGTTTTTGTTTTTCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGcc > 2:29341/1‑100 (MQ=255)
gTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGcc > 2:2193028/1‑100 (MQ=255)
gTAGAGGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGcc < 1:897016/100‑1 (MQ=255)
agagGTGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAg < 2:1424245/100‑1 (MQ=255)
gggTGCTGTCTTTGTGTCGCGCCGTAGTAATCGAGATCCCGCGGCGGGAGCTGATCGAGGCCAAGTTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGct < 2:2032586/99‑1 (MQ=255)
tGCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCtt < 1:2990723/100‑1 (MQ=255)
gCTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCttt < 1:2932575/100‑1 (MQ=255)
cTGTTTTTGTTTTGTTTTGTAATAAGAGATATCCGACGGCTGCAACTCATCGACGCCAAAGTGGCCCTTGGCAAAGTCGCGTACTTTCGCTATATCtttt > 2:1042789/1‑100 (MQ=255)
cTGTTTTTGTTTTGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTAGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCtgtt > 2:2582208/1‑100 (MQ=255)
tgtttttgttttGCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGCCGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCttttt > 1:3886913/1‑100 (MQ=255)
gtttttgttttgCGCTGTAGTAAGCGAGATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTc < 1:1380969/100‑1 (MQ=255)
gtgtttgttttgCGCTGTAGTAAGCGCTATCCCACGGCTGCAACTCATCGACGCCAAACTCGGCTTTGGCAAAGACACGCAATTGCGCCAGCTCTTTTTc < 2:3855555/97‑1 (MQ=255)
ttttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCga > 2:2954924/1‑99 (MQ=255)
ttttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGc > 1:1947936/1‑100 (MQ=255)
ttttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGc > 2:2047073/1‑100 (MQ=255)
ttttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGc > 1:498044/1‑100 (MQ=255)
tttgtttttCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGcc < 1:29812/100‑1 (MQ=255)
tttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGcc < 2:1671560/100‑1 (MQ=255)
tttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGcc < 1:1557274/100‑1 (MQ=255)
ttgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCt < 1:1575576/100‑1 (MQ=255)
tgttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCtt > 1:1139763/1‑100 (MQ=255)
gttttgCGCTGTAGTAAGCGATATCCCTCGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTtg < 2:243184/100‑1 (MQ=255)
gttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTtg < 2:3954821/100‑1 (MQ=255)
gttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTtg > 1:2328471/1‑100 (MQ=255)
gttttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTtg < 2:131572/100‑1 (MQ=255)
tttgCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTtgtg < 2:3522055/100‑1 (MQ=255)
|
TAACCACTTCAAACAGGCCGTTAACCGCTTTGTTTTCCGGGAAGTACGGACGCAGCTGTTCGTCACTGATGCTGTAGAGGTGCTGTTTTTGTTTTTCGCTGTAGTAAGCGATATCCCACGGCTGCAACTCATCGACGCCAAATTCGGCTTTGGCAAAGGCACGCAATTGCGCCAGCTCTTTTTCGCCTTGTG > NC_000913/3644072‑3644263
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
