Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,871,503 |
A→C |
D76E (GAT→GAG) |
dgoT ← |
D‑galactonate transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,871,503 | 0 | A | C | 92.9%
| 518.6
/ 14.7
| 168 | D76E (GAT→GAG) | dgoT | D‑galactonate transporter |
| Reads supporting (aligned to +/- strand): ref base A (7/5); new base C (76/80); total (83/85) |
| Fisher's exact test for biased strand distribution p-value = 5.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 171 total aligned reads displayed.
CCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGATCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGCCGAACTC > NC_000913/3871405‑3871598
|
ccAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGAt > 2:750543/1‑100 (MQ=255)
cAATTCATGACATTAAACCGGTGGCCAAGCCCTCTATTAAAGTCTCCACTGCCGAGCCCAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTc > 2:750087/1‑100 (MQ=255)
aTTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTa > 1:249614/1‑100 (MQ=255)
tAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTaaa > 2:1223684/1‑100 (MQ=255)
aaTGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTaaaa < 1:674285/100‑1 (MQ=255)
aaTGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTaaaa < 2:3881092/100‑1 (MQ=255)
tGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAaac > 1:2479035/1‑100 (MQ=255)
aCATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAaacca > 1:2332909/1‑100 (MQ=255)
aCATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAaacca < 2:674621/100‑1 (MQ=255)
cATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAaaccaa > 1:1652026/1‑100 (MQ=255)
aTTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAaaccaac < 1:1376199/100‑1 (MQ=255)
aTTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAaaccaac < 1:1836895/100‑1 (MQ=255)
gCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAAccgccg > 2:2778208/1‑100 (MQ=255)
cccGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCgg > 2:172062/1‑100 (MQ=255)
ccGTGGCAAAGCCCTGGAATAAAGTCGCCACTATCCAGCCAAATACCGCAATAAAATAAGTCGCGCGAGAACCTACGCGCTCTAAAAACCCACCGCCggg < 2:1758880/100‑1 (MQ=255)
cGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCgggg < 1:153997/100‑1 (MQ=255)
gTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGGACCTACGCGATCTAAAAACCAACCGCCGGGGa > 1:1215715/1‑100 (MQ=255)
gTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGa > 1:1900589/1‑100 (MQ=255)
gCAAAGCCCTGGAATAAAGTCGCCACTGACCATCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAATCCAACCGCCGGGGATCt < 1:3734961/100‑1 (MQ=255)
gCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCt < 1:945080/100‑1 (MQ=255)
cAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTg > 1:736839/1‑100 (MQ=255)
aaaGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGa < 2:1707071/100‑1 (MQ=255)
aaGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGAc < 2:3489064/100‑1 (MQ=255)
aaGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGAc > 1:635802/1‑100 (MQ=255)
aaGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGAc < 2:3276758/100‑1 (MQ=255)
gCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACAt < 1:2820809/100‑1 (MQ=255)
cTGGAATAAAGTCGCCACTGACCAGCCAAATATAGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGc > 1:3851133/1‑100 (MQ=255)
tGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCg > 1:577081/1‑100 (MQ=255)
tGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCg < 1:601324/100‑1 (MQ=255)
ggAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGt < 1:3667164/100‑1 (MQ=255)
ggAATAAAGACGCCAATGCCCAGCTAAATAAAGCAATAAAATAAATCACGCGAGAACATACGAGACCTAAAAATAAACCGCCGGGGATCTGACAtcgaga > 2:3882570/1‑95 (MQ=255)
aaTAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGtat < 1:3499985/100‑1 (MQ=255)
aTAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGtata < 1:1262102/100‑1 (MQ=255)
aTAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGtata < 2:3841158/100‑1 (MQ=255)
aGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGc < 1:2989886/100‑1 (MQ=255)
gTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGcc > 2:1099958/1‑100 (MQ=255)
gTCGCCACTGACCAGCCAAATATCGCAACAAAATAAGTCGCGCGAGAACCTACGCGATCTAAAAACCAACCGCCGGGGATCTGAAATAGCGTATAAAGcc < 2:3045416/100‑1 (MQ=255)
tCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCa < 1:2528417/100‑1 (MQ=255)
gCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAACCCAACCGCAGTGAATCTGACATAGGGGATACAGCCaaa > 2:3280622/1‑98 (MQ=255)
gCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGCCATAGCGTATAAAGCCAgg > 2:3579398/1‑100 (MQ=255)
gCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAgg < 1:3504939/100‑1 (MQ=255)
gCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAgg > 2:3550397/1‑100 (MQ=255)
ccACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGc > 2:2301884/1‑100 (MQ=255)
cACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCg > 2:3822639/1‑100 (MQ=255)
aCTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGa < 1:2084980/100‑1 (MQ=255)
cTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGaa > 2:1436889/1‑100 (MQ=255)
tGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAg < 1:4033937/100‑1 (MQ=255)
tGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAg < 2:3244925/100‑1 (MQ=255)
gACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAgg > 1:2848538/1‑100 (MQ=255)
aCCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCATCCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGc < 1:1819050/100‑1 (MQ=255)
ccAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAATCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGcc > 1:2148103/1‑100 (MQ=255)
ccAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGcc > 1:3824644/1‑100 (MQ=255)
ccAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGcc > 2:1212261/1‑100 (MQ=255)
gCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGaa > 2:1415155/1‑100 (MQ=255)
cAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGaaaa > 1:3804325/1‑100 (MQ=255)
cAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGaaaa > 1:3587296/1‑100 (MQ=255)
aaaTATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAAt < 1:1523259/100‑1 (MQ=255)
aaTATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATa < 1:43427/100‑1 (MQ=255)
aaTATCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATa < 1:3512289/100‑1 (MQ=255)
atatCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATAc < 2:2440928/100‑1 (MQ=255)
tatCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACa < 1:2218059/100‑1 (MQ=255)
tatCGCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACa < 1:1868200/100‑1 (MQ=255)
gcgttaacataaGGCACGCGAGAACCTACGCGCGTTAAAAGCCAGCCGCCGGGCATCTGACAGAGCGTTTAAAGCCATGCGAAGGCCGAAAATACATAGc < 2:3946253/96‑1 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAACATACATCGc > 1:3986654/1‑100 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGc < 1:1030252/100‑1 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGc < 1:229732/100‑1 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGc > 2:832514/1‑100 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGc > 1:2988043/1‑100 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGc > 1:3124887/1‑100 (MQ=255)
gCAATAAAATAAGTCACGCGAGAACCTACGCGATCTAAAAACAAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGc > 1:522820/1‑100 (MQ=255)
cAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGcc > 2:2042207/1‑100 (MQ=255)
cAATAAAATAAGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGcc < 1:3613518/100‑1 (MQ=255)
aaataaGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCAttt > 2:1635215/1‑100 (MQ=255)
aaataaGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCAttt < 2:3724424/100‑1 (MQ=255)
aataaGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTc > 2:55418/1‑100 (MQ=255)
aagaaGTCACGCGAGAACCTACGCGCGTTAAAAACCAACCGCCGGGGATCGGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTc < 2:3503398/97‑1 (MQ=255)
ataaGTCACGCAACAACCTAAGCGCTCTAAATACCATCCTCCGGGGATCTGACATAGCGTATAAAGCCAGACGAAGGCCGAAAATACATAGCCCATTTcc < 2:733665/100‑1 (MQ=255)
aGTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCt > 2:2536847/1‑100 (MQ=255)
gTCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCtt > 2:1563742/1‑100 (MQ=255)
tCACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCttt < 2:655171/100‑1 (MQ=255)
cACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTg > 1:3376049/1‑100 (MQ=255)
cACGCGAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTg > 2:2903321/1‑100 (MQ=255)
aCGCGAGAACCTACGCGATCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTgg < 2:2153740/100‑1 (MQ=255)
cgcgAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGt < 2:2128000/100‑1 (MQ=255)
cgcgAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGt < 2:1030152/100‑1 (MQ=255)
cgcgAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGt > 1:4006067/1‑100 (MQ=255)
cgcgAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGt > 2:3107138/1‑100 (MQ=255)
cgcgAGAACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATACCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGt < 2:1133773/100‑1 (MQ=255)
gcgAGAACCTACGCGCTCTAAAAACCACCCGCCGGTGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTa < 1:767793/100‑1 (MQ=255)
gagaACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAAt < 1:2184272/100‑1 (MQ=255)
gagaACCTACGCGATCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAAt < 1:2649628/100‑1 (MQ=255)
gaACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGc > 2:377573/1‑100 (MQ=255)
gaACCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGc < 1:3904214/100‑1 (MQ=255)
aaCCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGcc < 1:2913236/100‑1 (MQ=255)
aaCCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGcc < 1:1392373/100‑1 (MQ=255)
aCCTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGCCg > 1:1046836/1‑100 (MQ=255)
ccTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGCCGa > 1:4074505/1‑100 (MQ=255)
ccTACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGCCGa > 2:878276/1‑100 (MQ=255)
tACGCGCTCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGCCGAAc < 1:2362195/100‑1 (MQ=255)
atgcgcTCTAAAAACCAACCGCCGGGGATATGACATAGCGTATAAAGACAGGCGAATGCCGAAAATACATAGCCCATCTCCGCTTTGGTAATGCCGAAct > 2:250697/3‑100 (MQ=255)
|
CCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAAATAAGTCACGCGAGAACCTACGCGATCTAAAAACCAACCGCCGGGGATCTGACATAGCGTATAAAGCCAGGCGAAGGCCGAAAATACATAGCCCATTTCCGCTTTGGTAATGCCGAACTC > NC_000913/3871405‑3871598
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
