Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F54 I1 R1
|
44 |
120.8 |
6135323 |
93.2% |
5718121 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 97.5%
| 430.6
/ 2.8
| 119 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base A (54/62); total (57/62) |
| Fisher's exact test for biased strand distribution p-value = 1.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 137 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAA > NC_000913/4494777‑4494968
|
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAtt < 1:2592263/100‑1 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a < 1:2958436/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑a > 1:1714230/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑a > 2:2564518/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaa < 2:347298/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaa > 2:860593/1‑100 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaaa > 1:1714909/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTGTTGTCTGTTTATCATT‑‑aa‑aaaga < 2:2075597/100‑3 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaaaa < 2:1414128/100‑1 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaaaaac < 2:465734/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGATTGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaaaa > 1:748234/1‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaaaaaca < 2:1939567/100‑4 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa‑aaaaaacag > 2:2707706/1‑96 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTa > 2:2416780/1‑100 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTg < 1:2416769/100‑1 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGa < 1:2378124/100‑1 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGat > 1:2448278/1‑100 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGat > 2:735868/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGata > 1:1117141/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGata > 1:231322/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGatat > 1:2341860/1‑100 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATAtttt < 2:712847/100‑1 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTa < 1:1996219/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTAc < 2:1724339/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAg > 2:668185/1‑100 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAgg < 1:2499298/100‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGACTTATAGTCTGTGCATCATTA‑AA‑AAAAACAGAATCGTGATCTTTTACGCTAg > 1:809463/1‑99 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAggg < 1:375891/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAggg > 1:1013286/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTa > 1:218180/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTa > 1:374009/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 1:2318562/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:2794599/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc > 1:1042231/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:2344896/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGcccc > 1:3038586/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:2707690/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 1:917137/1‑100 (MQ=255)
gtttcattCTTTTTATAAAGACTGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc > 2:1903840/8‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:85262/100‑1 (MQ=255)
aTACAGTTTTTATAAAAAGAATGAAACAGGATTTATTGTCTGAAAAAAAAAA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt < 1:2522122/97‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACTGAATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 1:155986/99‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:419871/100‑1 (MQ=255)
tCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct < 2:1013290/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:1588699/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 2:2613244/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATAAATA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 1:2164977/100‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg > 2:1681509/1‑100 (MQ=255)
tataAAAAGAATGAAACATGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:1007827/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCATGGGTAGCCCCCATGTTCATTTCCTCTgg > 1:1330939/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:2734277/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:1714916/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:596397/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:2568160/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:2240116/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCCCTGGtt > 2:2437625/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGTTAGCCCCCATGTTCATTTCCTATGGTTa > 1:1104622/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:657288/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCACCATGTTCATTTCCTCTGGTTa > 1:593541/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTaa > 2:2917935/1‑99 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:29038/1‑100 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:898109/100‑1 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:1424841/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTAAAA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 2:2600739/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCTTCTGGTTAGATGGc > 1:1656395/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 1:1656897/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 1:890713/99‑1 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 1:1688365/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:1005326/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:1754165/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:165578/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:2314869/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 2:1714237/100‑1 (MQ=255)
cAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg < 2:120938/100‑1 (MQ=255)
cAGGATTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg < 2:374010/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:792142/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:2564504/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc > 1:2905430/1‑100 (MQ=255)
ttATTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTa > 1:2894899/1‑100 (MQ=255)
aTTGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:2906654/1‑100 (MQ=255)
ttGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtc > 2:1243273/1‑100 (MQ=255)
tGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 2:1429899/1‑100 (MQ=255)
tGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 1:925308/1‑100 (MQ=255)
tGTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct < 1:3029498/100‑1 (MQ=255)
gTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:2909217/1‑100 (MQ=255)
gTCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:1905822/1‑100 (MQ=255)
tCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 2:218180/100‑1 (MQ=255)
tCTGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 1:1124768/100‑1 (MQ=255)
tCTGTTCATCATT‑‑AACAAAAACAGTATCGTGATATTTTACGCAATGGAAGACCCCACGCTCATTTACTCTCGTTAGATCGCGCCCATGACACTactatc > 1:2735053/1‑94 (MQ=255)
tGTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGTGACTATGAAACTATTCTcgcg > 1:1690349/1‑100 (MQ=255)
tGTTCATCATT‑‑AA‑AAAAACAGTATCGTGATATTTTACGTAATGGTAGCCCCCATGTTCATTTCTTTTGGTTAGATGGCGACTATGAAACTATtc > 1:638099/1‑94 (MQ=255)
tGTTCATCATT‑‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:1220941/1‑100 (MQ=255)
gTTCATCATTA‑AA‑AAAAACAGTCTCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:207503/1‑100 (MQ=255)
gTTCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc < 2:930504/100‑1 (MQ=255)
ttCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 1:3041474/100‑1 (MQ=255)
ttCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 1:1243269/100‑1 (MQ=255)
ttCATCATTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 2:38804/100‑1 (MQ=255)
tcatcaTTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa > 1:1075206/1‑100 (MQ=255)
catcatTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:2961372/1‑100 (MQ=255)
catcatTA‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGCAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:1682276/1‑100 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAA > NC_000913/4494777‑4494968
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
