Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F54 I0 R1
|
44 |
137.0 |
6550480 |
97.1% |
6360516 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.9%
| 463.6
/ 6.0
| 131 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base A (71/56); total (72/59) |
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 157 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑tt > 2:2923881/1‑100 (MQ=255)
tCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aa < 1:1707188/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaa > 2:2579055/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaa < 1:2366798/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaa < 1:519521/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa < 1:906932/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa > 2:1752776/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aa > 2:1227921/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aa > 2:1630588/1‑100 (MQ=255)
gaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aaa > 1:315406/1‑99 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTTTAAAAAGAATGAAACAGGTTTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aa > 2:402625/1‑98 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aaac < 1:2815483/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aaac < 1:215171/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTGAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aaac < 2:618823/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aaaca > 2:507704/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑aaaaa‑aaacag > 1:3028781/1‑96 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATTCTTCATACAGTCTTCATAAAAAGAATGAAACAGGATTTATTGTCTGTTAATCA‑TT‑‑aaaaa‑aaacag > 2:1259028/1‑95 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTa > 1:1582210/1‑100 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCg < 2:158825/100‑1 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGa < 1:370196/100‑1 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGa > 2:1456334/1‑100 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGa < 1:2579067/100‑1 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATATATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGa > 2:2884306/1‑100 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACACTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTACATCA‑TTA‑AAAAA‑AACAGTATCGt > 2:934906/1‑98 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGat > 2:2937892/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGatat > 2:1862196/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATAtt < 1:2936099/100‑1 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATAttt > 2:2892468/1‑100 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATATAAAGAATGAAACAGGATTTGTTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATAtttt < 2:1783143/100‑1 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATAtttt < 1:475924/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTAc > 2:2251052/1‑99 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACg < 1:1827166/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCAGACAGTCTTTATAAAAAGAATGAAACAGGATGTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACg > 2:1905630/1‑100 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCa > 2:826845/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAggg > 2:1386751/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAggg > 2:645635/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTa > 2:3000264/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTa > 2:3177250/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAg > 1:1275208/1‑100 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGc > 1:1144550/1‑100 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGcc < 2:1124698/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:2174542/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGcccc < 2:2188576/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGcccc < 1:2367557/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAATAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:816314/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:2165353/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:2972536/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:577781/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt < 1:2934593/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:2584138/1‑100 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt > 2:407379/1‑100 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt > 2:903737/1‑100 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 1:903739/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:2910076/97‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 2:943108/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TAAAAAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 2:2869787/100‑1 (MQ=255)
tACAGTATTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TG‑‑AAAAAGAACAGTATGGTGATATTTTACTCAAGGGTAGCCCCCATGTGCAt > 2:269146/1‑100 (MQ=255)
aCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAtt < 2:646857/100‑1 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 1:2874990/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt < 1:2653747/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc < 2:496584/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTAATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGAGATTTTACGCAAGGGTAGCCCCCATGTTCATTTc < 2:1974581/100‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 1:1111727/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 2:367876/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 1:1230254/100‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 1:993463/100‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGATAGCCCCCATGTTCATTTCCTCTg > 2:1393734/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAGGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:1819507/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:315403/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTAAGCAAGGTTAGCCCCCATGTTCATTTCCTCTgg > 2:2192037/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGCCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg > 1:1852285/1‑100 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:700126/1‑100 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 2:2415891/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCACACATGTTCATTTCATCTGGt > 2:1941226/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 2:2584126/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:2694827/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACTCAAGGGTAACCCCCATGTTCATTTCCTCTGGTTAg > 2:924337/1‑100 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 1:3144513/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc > 2:456300/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 1:698942/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 2:9617/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:2002292/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGTCGACt > 2:3064131/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:412012/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:1351964/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa > 1:1163947/1‑100 (MQ=255)
ggATTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 1:2016062/1‑99 (MQ=255)
aTTTATTGTCTGTTCATCATTT‑‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:2923897/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:1534041/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc > 2:1166535/1‑100 (MQ=255)
tATTGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt < 2:1582206/100‑1 (MQ=255)
ttGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtc > 1:741247/1‑100 (MQ=255)
tGTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 1:71241/1‑100 (MQ=255)
gTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:1920662/1‑100 (MQ=255)
gTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:964173/1‑100 (MQ=255)
gTCTGTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAACCACCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:584404/1‑100 (MQ=255)
gTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:1614807/1‑100 (MQ=255)
gTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:118791/1‑100 (MQ=255)
gTTCATCA‑TTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:2133078/1‑100 (MQ=255)
tca‑tTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 2:2329865/100‑1 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
