Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F124 I1 R1
|
18 |
121.9 |
6003667 |
95.0% |
5703483 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,248,023 |
G→A |
W84* (TGG→TAG) |
yqjA → |
general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,248,023 | 0 | G | A | 98.8%
| 295.7
/ NA
| 85 | W84* (TGG→TAG) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (37/47); total (38/47) |
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AGTTTACTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCA > NC_000913/3247926‑3248119
|
aGTTTACTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCACGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTagg < 1:2109442/100‑1 (MQ=255)
ttACTGGTATTGGTCGGCGTGTTGATTGCGAATGGCGCGCTGCGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCGGCCTCGGCTGCTAGGTCa < 1:2104077/100‑1 (MQ=255)
ttACTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCa < 2:2403509/100‑1 (MQ=255)
aCTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGTTGCTAGGTCAGc < 2:1971582/100‑1 (MQ=255)
aCTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGc < 2:1058099/100‑1 (MQ=255)
aCTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGc < 2:2781424/100‑1 (MQ=255)
cTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGc > 1:2002681/1‑99 (MQ=255)
cTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCt > 2:2752422/1‑100 (MQ=255)
cTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCt < 1:1374051/100‑1 (MQ=255)
tGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCta > 1:2577158/1‑100 (MQ=255)
tATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTatat < 1:2564987/100‑1 (MQ=255)
tATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTatat < 1:2615449/100‑1 (MQ=255)
ggTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAg < 2:2632640/100‑1 (MQ=255)
gTCGGCGAGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAgg < 1:2311626/100‑1 (MQ=255)
cGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAgggg > 1:646043/1‑100 (MQ=255)
cGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAggg > 1:1446937/1‑99 (MQ=255)
gCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCg > 1:2491265/1‑100 (MQ=255)
gCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCg < 1:1339533/100‑1 (MQ=255)
tgtTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATg < 2:688474/100‑1 (MQ=255)
gtTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGAATCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATgg > 1:1845187/1‑100 (MQ=255)
tGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCt > 1:1913194/1‑100 (MQ=255)
tGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCt > 2:2983737/1‑100 (MQ=255)
gATTGCGAAAGGCGCGATGGGCTATCTGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTg > 2:2896082/1‑100 (MQ=255)
ttGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTggg > 1:2048928/1‑100 (MQ=255)
tGCGAAAGGCGCGATGGGCTGTCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCACGCGCCATGGcccg > 1:1833344/1‑95 (MQ=255)
tGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGc < 2:2348852/100‑1 (MQ=255)
tGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGc < 2:746738/100‑1 (MQ=255)
tGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGc < 2:2513486/100‑1 (MQ=255)
tGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGc < 2:1064334/100‑1 (MQ=255)
gCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCa < 1:859989/100‑1 (MQ=255)
gCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCa > 2:899362/1‑100 (MQ=255)
gCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCa > 2:650472/1‑100 (MQ=255)
gAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAAt > 1:1978535/1‑100 (MQ=255)
gAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAAt < 1:1585932/100‑1 (MQ=255)
aaaGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATa > 1:2190183/1‑100 (MQ=255)
ggCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCCATAcac > 2:2883739/1‑98 (MQ=255)
ggCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATAccc < 1:242834/100‑1 (MQ=255)
cgcgATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGc < 2:1519832/100‑1 (MQ=255)
cgATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCAc > 2:855874/1‑100 (MQ=255)
gATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCAcc < 1:1181403/100‑1 (MQ=255)
aTGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGTGCGATGGCTGGGCAATACCCGCACCg < 1:8705/100‑1 (MQ=255)
aTGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCg < 2:2485541/100‑1 (MQ=255)
aTGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCg < 2:347858/100‑1 (MQ=255)
aTGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCg < 2:943335/100‑1 (MQ=255)
tGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGt < 2:2769594/100‑1 (MQ=255)
gggCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTa > 2:2312099/1‑100 (MQ=255)
ggCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTAc > 1:1259272/1‑100 (MQ=255)
ggCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTAc > 2:1206975/1‑100 (MQ=255)
ggCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTAc > 2:1241176/1‑100 (MQ=255)
ggCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTAc > 2:2490324/1‑100 (MQ=255)
ggCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTAc > 1:1761986/1‑100 (MQ=255)
gCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACa < 2:2975127/100‑1 (MQ=255)
cTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCATGTGCATTGGCTGGGCAATACCCGCACCg < 1:1399333/95‑1 (MQ=255)
tATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACaaa < 2:2852693/100‑1 (MQ=255)
ccGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACt > 1:524317/1‑100 (MQ=255)
cGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTg > 1:1660254/1‑100 (MQ=255)
cGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTg > 1:2783545/1‑100 (MQ=255)
cGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTg < 2:1340161/100‑1 (MQ=255)
cGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTg > 1:2769622/1‑100 (MQ=255)
gCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTgg > 2:919430/1‑100 (MQ=255)
gCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTgg < 2:361443/100‑1 (MQ=255)
aTTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTAtctc > 1:1782364/1‑100 (MQ=255)
tCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCa < 1:1098250/99‑1 (MQ=255)
ctgctgctgACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCAtt < 2:849281/100‑1 (MQ=255)
ctgctgctgACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCAtt > 2:2713251/1‑100 (MQ=255)
ctgctgctgACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCAtt < 1:1895193/100‑1 (MQ=255)
tgctgctgAACGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCAttt < 2:2393007/100‑1 (MQ=255)
gctgctgACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTa > 1:2151390/1‑100 (MQ=255)
gctgctgACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTa < 1:338447/100‑1 (MQ=255)
tgctgACCGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTAcc < 1:150730/100‑1 (MQ=255)
gACCGTTGCCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCcgcg > 2:1827761/1‑100 (MQ=255)
cGTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCAt < 2:646045/100‑1 (MQ=255)
gTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCAtt > 2:1993339/1‑100 (MQ=255)
gTTGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCAtt > 1:1623545/1‑100 (MQ=255)
gTTGCCGCCAGCCTCGGCTGATAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCAtt > 1:1829580/1‑100 (MQ=255)
ttGCCGCCAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTa < 2:2290275/100‑1 (MQ=255)
ccgccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatca < 1:2143514/100‑1 (MQ=255)
ccgccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatca < 2:150746/100‑1 (MQ=255)
ccgccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGAAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatca < 1:1016504/100‑1 (MQ=255)
cgccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatcat < 1:1428055/100‑1 (MQ=255)
cgccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatcat > 2:453516/1‑100 (MQ=255)
gccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatcatc < 2:1845195/100‑1 (MQ=255)
gccAGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTatcatc < 1:855871/100‑1 (MQ=255)
aGCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAAc < 2:2577170/100‑1 (MQ=255)
gCCTCGGCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAAcg < 1:650470/100‑1 (MQ=255)
ggCTGCTAGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGcac > 2:565273/1‑100 (MQ=255)
tgctaGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACAcc > 1:2517180/1‑100 (MQ=255)
gctaGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCa > 2:682767/1‑100 (MQ=255)
|
AGTTTACTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCA > NC_000913/3247926‑3248119
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
