Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F201 I0 R1
|
306 |
176.9 |
8831342 |
93.4% |
8248473 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,243,370 |
C→T |
26.5% |
L49L (CTG→CTA) |
malG ← |
maltose transporter subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,243,370 | 0 | C | T | 26.5%
| 337.8
/ 132.8
| 200 | L49L (CTG→CTA) | malG | maltose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (75/72); new base T (20/33); total (95/105) |
| Fisher's exact test for biased strand distribution p-value = 1.10e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.75e-01 |
Only 100 of 204 total aligned reads displayed.
CAGTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAGGTG > NC_000913/4243271‑4243468
|
cagTACCGGGAATGGCGGTGGCGTAATACGACCATCAGCCTGTTCAACGCTAAAACCTAACGACAGTTTCCAGTCATCCCAGTAGCTTTGCTCCGGGATc > 1:733555/1‑100 (MQ=255)
gTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAg < 2:4219462/100‑1 (MQ=255)
gTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAg > 2:965287/1‑100 (MQ=255)
gTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAg < 2:1179336/100‑1 (MQ=255)
aCCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGc < 2:3021027/100‑1 (MQ=255)
aCCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTGGCTCCGGGATCAGGc < 1:1087826/100‑1 (MQ=255)
ccGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCt > 2:4092064/1‑100 (MQ=255)
ccGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCt > 2:3586503/1‑100 (MQ=255)
ccGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCt > 1:2006797/1‑100 (MQ=255)
ccGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTGCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCt > 2:3094027/1‑100 (MQ=255)
gggAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGc > 1:3069648/1‑100 (MQ=255)
gggAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGc < 1:2864133/100‑1 (MQ=255)
ggAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGcc < 1:1758241/100‑1 (MQ=255)
aaTGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCgg < 1:412737/100‑1 (MQ=255)
aaTGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCgg < 1:3012773/100‑1 (MQ=255)
aaTGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCgg < 1:3946013/100‑1 (MQ=255)
ggCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTcn < 1:3230526/100‑2 (MQ=255)
ggCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCg < 1:3657854/100‑1 (MQ=255)
gCGGTGGCGTAATGCGACCATCAGCCTGTTCGACGCTCAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGc < 1:2964955/100‑1 (MQ=255)
gCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGc > 1:186766/1‑100 (MQ=255)
gCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGc < 2:2828176/100‑1 (MQ=255)
cGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCa < 2:880790/100‑1 (MQ=255)
gTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCaaa < 1:4006512/100‑1 (MQ=255)
tGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAg < 2:2082185/100‑1 (MQ=255)
tGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAg < 1:247402/100‑1 (MQ=255)
tGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAg < 2:3759638/100‑1 (MQ=255)
tAATGCGACCATCAGCCTCTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTcc < 1:1833262/100‑1 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTccc < 2:3025405/100‑1 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTccc < 2:733811/100‑1 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTccc > 2:639086/1‑100 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTccc > 2:551641/1‑100 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTccc < 1:887704/100‑1 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTccc > 2:264050/1‑100 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAATTTCCAGTGATCCCAGGAGGTTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTccc > 1:2407601/1‑100 (MQ=255)
tGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTg < 2:2352225/100‑1 (MQ=255)
tGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTg > 2:1404352/1‑100 (MQ=255)
tGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTg < 2:3210129/100‑1 (MQ=255)
cGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGAc < 2:246752/100‑1 (MQ=255)
cGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCACAGCTTCCCTGAc > 2:2555916/1‑100 (MQ=255)
cGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGAc > 2:2388770/1‑100 (MQ=255)
aCCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGc > 1:1567170/1‑100 (MQ=255)
cAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCga < 1:1728824/100‑1 (MQ=255)
aGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCgag > 1:3506139/1‑100 (MQ=255)
gCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCgaga > 1:4197110/1‑100 (MQ=255)
cTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCACGCTGCCTGTCGCAAAGTTTCCCTGACGCAGCGAGATa > 1:509488/1‑100 (MQ=255)
tGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAg < 2:2183604/100‑1 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac < 2:586912/100‑1 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac > 1:1630141/1‑100 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac < 2:243798/100‑1 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCAGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac > 1:1024431/1‑100 (MQ=255)
aaCGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgacg > 1:342297/1‑100 (MQ=255)
aCGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgacga < 2:1698777/100‑1 (MQ=255)
tccgatctccTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCgacgac < 1:2123455/92‑1 (MQ=255)
cGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGGTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCgacgac < 1:2822813/100‑1 (MQ=255)
gCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGAcc > 2:3031766/1‑100 (MQ=255)
ctgaaaCCTAACGCCAGTTTCCAGTGAGCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCa > 1:3871049/4‑100 (MQ=255)
cTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCa > 2:4231292/1‑100 (MQ=255)
cTAAAACCTAACGCAAGTGCCCAGTGATCCGAGGAGATTCGCGCAGGGATCAGTTTGCCGCTCGCAAAATTTCCCTGGCGCAGCGGGATAGCGACGCCCa > 1:650860/1‑100 (MQ=255)
aaaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATc < 2:1888476/100‑1 (MQ=255)
aaaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATc > 1:1297595/1‑100 (MQ=255)
aaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATc < 2:3347942/99‑1 (MQ=255)
aaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATca < 1:1809356/100‑1 (MQ=255)
ccTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCgacgacagatcgga > 2:2123462/1‑92 (MQ=255)
aaCGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCg < 1:1819015/100‑1 (MQ=255)
cGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCggg < 2:941011/100‑1 (MQ=255)
cGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCggg > 2:3503725/1‑100 (MQ=255)
ccattgtCCAGTGATGCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGaa < 1:209888/94‑1 (MQ=255)
ccAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGaa < 2:796526/100‑1 (MQ=255)
tCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAAt > 2:3748002/1‑100 (MQ=255)
cAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCg > 2:3667398/1‑100 (MQ=255)
aGTGATCGCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGc < 1:1377047/100‑1 (MQ=255)
aGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGc > 1:1668921/1‑100 (MQ=255)
gTGATCCCAGGAGATTTGCTACGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGAGACGACCATCAGCAGCGGGAACATCATCGCt > 1:2465528/1‑100 (MQ=255)
tGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTg > 2:1660252/1‑100 (MQ=255)
gATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGc < 1:910862/100‑1 (MQ=255)
aTCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCg < 2:1081411/100‑1 (MQ=255)
aTCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCg < 1:2736581/100‑1 (MQ=255)
aTCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCg < 2:3968378/100‑1 (MQ=255)
tCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGa < 2:3762446/100‑1 (MQ=255)
ccAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATa > 1:495093/1‑100 (MQ=255)
cAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATaa > 1:1610620/1‑100 (MQ=255)
cAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATaa > 1:3573300/1‑100 (MQ=255)
ggAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATaaaa < 1:977287/100‑1 (MQ=255)
gagaTTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATaaaaa < 2:627919/100‑1 (MQ=255)
agaTTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAag > 2:4280129/1‑100 (MQ=255)
gaTTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagt > 2:2887126/1‑100 (MQ=255)
aTTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagt < 2:439796/99‑1 (MQ=255)
tttGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtag > 2:4284373/1‑100 (MQ=255)
ttGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc < 2:4197141/100‑1 (MQ=255)
ttGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc < 1:1253184/100‑1 (MQ=255)
tctcTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc < 1:2227492/97‑1 (MQ=255)
cTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagcagt > 2:476315/1‑100 (MQ=255)
cTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagcaga > 2:2227502/1‑99 (MQ=255)
ccGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTTCGATAAAAagtagcagtag > 1:424893/1‑100 (MQ=255)
cGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagcagtagc < 1:153352/100‑1 (MQ=255)
gggATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAgtagcagtagca < 1:3848979/100‑1 (MQ=255)
gggATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAgtagcagtagca > 1:3814860/1‑100 (MQ=255)
aTCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAGGt > 2:1539534/1‑100 (MQ=255)
tCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAGGTg < 2:778720/100‑1 (MQ=255)
tCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAGGTg < 2:1022685/100‑1 (MQ=255)
|
CAGTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAGGTG > NC_000913/4243271‑4243468
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
