Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I1 R1
|
77 |
120.7 |
6116409 |
93.2% |
5700493 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,243,370 |
C→T |
L49L (CTG→CTA) |
malG ← |
maltose transporter subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,243,370 | 0 | C | T | 96.9%
| 308.1
/ ‑0.4
| 98 | L49L (CTG→CTA) | malG | maltose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (41/53); total (44/54) |
| Fisher's exact test for biased strand distribution p-value = 5.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 |
AGTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAG > NC_000913/4243272‑4243465
|
agTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCa < 2:2162876/100‑1 (MQ=255)
gTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAg < 1:2666868/100‑1 (MQ=255)
aCCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGc < 2:2841484/100‑1 (MQ=255)
aCCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGc < 2:877365/100‑1 (MQ=255)
ccGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCt > 2:217260/1‑100 (MQ=255)
ggAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGcc < 2:2909743/100‑1 (MQ=255)
ggAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGcc > 2:247931/1‑100 (MQ=255)
gAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCg < 1:1278969/100‑1 (MQ=255)
gAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCg < 1:415318/100‑1 (MQ=255)
tgCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCg < 2:2237378/99‑1 (MQ=255)
ggCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCg > 1:2830301/1‑100 (MQ=255)
ggCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCg < 1:167083/100‑1 (MQ=255)
gCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCga > 1:2237407/1‑99 (MQ=255)
cGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCa > 1:1329939/1‑100 (MQ=255)
cGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCa > 1:1446927/1‑100 (MQ=255)
cGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCa > 2:2491480/1‑100 (MQ=255)
gTGGCGTAATGCGACCATCAGCCTGTTCAATGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCaaa < 1:618367/100‑1 (MQ=255)
tGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAg < 2:547245/100‑1 (MQ=255)
ggCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGt > 2:332247/1‑100 (MQ=255)
gCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGCTTTGCTCCGGGATTAGGCTGCCGGTCGCaaatt < 1:1523555/99‑3 (MQ=255)
cGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGttt > 2:1426094/1‑100 (MQ=255)
cGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGttt > 1:1012266/1‑100 (MQ=255)
gTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTc > 1:2778996/1‑100 (MQ=255)
tAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTcc > 2:1716984/1‑100 (MQ=255)
tAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATGTGCTCCGGGATTAGGCTGCCGGGCGCAAAGTGTcc > 2:912470/1‑100 (MQ=255)
aaTGCTACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTccc < 2:1147957/100‑1 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTccc < 1:870972/100‑1 (MQ=255)
aaTGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTccc > 1:465213/1‑100 (MQ=255)
tGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTg < 2:1406978/100‑1 (MQ=255)
cGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGAc < 1:168081/100‑1 (MQ=255)
cGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGAc > 2:1979349/1‑100 (MQ=255)
cATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAg > 1:2315534/1‑100 (MQ=255)
tCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCg < 2:1202975/100‑1 (MQ=255)
tCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCg > 2:2035608/1‑100 (MQ=255)
aGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCAAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCgag < 2:1908679/100‑1 (MQ=255)
gCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCTAAGTTTACCTGACGCAGCgcga > 1:1295007/1‑100 (MQ=255)
gCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCgaga > 2:2793375/1‑100 (MQ=255)
gCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCgaga > 1:1127899/1‑100 (MQ=255)
gCCTGTTCAACGCCAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTACGGGATTAGGCTGCCGGTCGCAAAGTTTCGCTGACGCAGCgag > 2:1893394/1‑99 (MQ=255)
cttttCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGATATTTGCTCCTCGATTAGGCTGCCGGTCGCAAAATTTCCCTCACGCAGCGAGAt < 2:2927874/96‑1 (MQ=255)
gTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGc < 1:768299/100‑1 (MQ=255)
ttCAACGCTAAAACCTAACGCCAGTTTCCGGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcg < 2:128726/100‑1 (MQ=255)
ttCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcg < 1:1310108/100‑1 (MQ=255)
ttCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcg < 1:2976605/100‑1 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac < 1:2137845/100‑1 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac < 2:2397016/100‑1 (MQ=255)
cAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgac < 2:850312/100‑1 (MQ=255)
aaCGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgacg < 2:1313854/100‑1 (MQ=255)
aCGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGcgacga < 2:266076/100‑1 (MQ=255)
cGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCgacgac > 1:2993354/1‑100 (MQ=255)
cGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCgacgac < 2:63029/100‑1 (MQ=255)
gCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGAcc < 1:1745586/100‑1 (MQ=255)
gCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGAcc < 2:1679548/100‑1 (MQ=255)
gCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGAcc < 1:325244/100‑1 (MQ=255)
cTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCa > 2:1813184/1‑100 (MQ=255)
cTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCa > 1:1221726/1‑100 (MQ=255)
aaaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATc < 1:2936694/100‑1 (MQ=255)
aaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATca > 2:969685/1‑100 (MQ=255)
aaaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATca < 2:235800/100‑1 (MQ=255)
aaCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGAT‑AGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATcagc > 1:98218/1‑100 (MQ=255)
aCCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATcagc < 1:1099808/100‑1 (MQ=255)
ccTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATcagca < 1:1836153/100‑1 (MQ=255)
cTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATcagn < 2:1808450/98‑2 (MQ=255)
tAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCagcagc < 2:1812362/100‑1 (MQ=255)
aaCGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCg < 1:1717004/100‑1 (MQ=255)
aaCGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCg > 2:2718551/1‑100 (MQ=255)
aCGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCgg > 2:1661906/1‑100 (MQ=255)
aCGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCgg > 2:2367528/1‑100 (MQ=255)
cGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCggg > 1:238933/1‑100 (MQ=255)
gCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGa < 2:2545232/100‑1 (MQ=255)
ccAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGaa > 1:2746406/1‑100 (MQ=255)
aGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACa < 1:16726/100‑1 (MQ=255)
ttCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATaa > 1:2188940/1‑100 (MQ=255)
tCCAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAAt < 1:2179631/100‑1 (MQ=255)
ccAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACTACCATCAGCAGCGGGAACATAATc < 2:2870426/100‑1 (MQ=255)
ccAGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATc > 1:125062/1‑100 (MQ=255)
ccAGTGATCCCAGAAGATTTGCTCCGGGATTAGGCTGCGGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAAt > 2:1890375/1‑99 (MQ=255)
aGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATc < 2:888107/98‑1 (MQ=255)
aGTGATCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGc > 2:2379323/1‑100 (MQ=255)
gATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGc > 1:1128514/1‑100 (MQ=255)
aTCCCAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCg < 2:1445333/100‑1 (MQ=255)
cccAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCg < 1:2998977/98‑1 (MQ=255)
cAGGAGATTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATaa > 2:2998294/1‑100 (MQ=255)
agaTTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAag > 2:378540/1‑100 (MQ=255)
aTTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagta > 1:81445/1‑100 (MQ=255)
aTTTGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagta < 2:816336/100‑1 (MQ=255)
tttGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtag < 1:1979372/100‑1 (MQ=255)
tttGCTCCGGGATTAGGCTGCCGGTCGCAAAGTGTCCCGGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtag < 2:3037087/100‑1 (MQ=255)
ttGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc < 1:2396124/100‑1 (MQ=255)
ttGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc > 2:847846/1‑100 (MQ=255)
ttGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc < 2:2830262/100‑1 (MQ=255)
ttGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagc < 1:784491/100‑1 (MQ=255)
tGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagca > 1:2537290/1‑100 (MQ=255)
tGCTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagca < 1:2998335/100‑1 (MQ=255)
cTCCGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagcagt > 2:335539/1‑100 (MQ=255)
tCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagcagta > 1:1435995/1‑100 (MQ=255)
ccGGGATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAagtagcagtag < 1:2843240/100‑1 (MQ=255)
ggATTAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGtagcagtcgcag > 1:1300886/1‑100 (MQ=255)
|
AGTACCGGGAATGGCGGTGGCGTAATGCGACCATCAGCCTGTTCAACGCTAAAACCTAACGCCAGTTTCCAGTGATCCCAGGAGATTTGCTCCGGGATCAGGCTGCCGGTCGCAAAGTTTCCCTGACGCAGCGAGATAGCGACGACCATCAGCAGCGGGAACATAATCGCTGCGATAAAAAGTAGCAGTAGCAG > NC_000913/4243272‑4243465
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
