Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,525,798 |
A→G |
24.2% |
S118P (TCT→CCT) |
nudE ← |
adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,525,798 | 0 | A | G | 24.2%
| 280.2
/ 102.2
| 177 | S118P (TCT→CCT) | nudE | adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (74/58); new base G (25/17); total (99/78) |
| Fisher's exact test for biased strand distribution p-value = 7.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01 |
Only 100 of 181 total aligned reads displayed.
GCCAGCGCACCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCTTTCACC > NC_000913/3525699‑3525897
|
gccagcgCACCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGa < 2:702246/100‑1 (MQ=255)
cagcgCACCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCAATTTGCTGGAAAAGTAAGACg > 1:3782809/1‑100 (MQ=255)
agcgCACCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACgg < 1:2211394/100‑1 (MQ=255)
cACCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGcc < 1:3908044/100‑1 (MQ=255)
aCCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCa < 1:2670458/100‑1 (MQ=255)
cTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGACATg > 2:1692909/1‑100 (MQ=255)
tgtgGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTATCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGc < 2:2327412/100‑1 (MQ=255)
ttgTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTTCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTg < 1:1006491/98‑1 (MQ=255)
ggTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGa > 2:3295814/1‑100 (MQ=255)
ggTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGa > 1:2177941/1‑100 (MQ=255)
gTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAg < 2:2083208/100‑1 (MQ=255)
gCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGctt > 2:1175762/1‑100 (MQ=255)
cGGCTCTGGCTCATCGCCTTCCAGTGATTTCGGGTAGTGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGcttc < 1:2111541/100‑1 (MQ=255)
cGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGcttc > 2:283467/1‑100 (MQ=255)
ggCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGTCGGTGCCATGCTGAGcttc < 2:590256/99‑1 (MQ=255)
gCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGTAAAAGTAAGGCGGTGCCATGCTAAGctt > 1:956149/1‑97 (MQ=255)
gCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAATTAAGACGGTGCCATGCTGAGcttctt < 1:2375320/100‑1 (MQ=255)
ctctGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCttcttc < 2:3122789/100‑1 (MQ=255)
ctGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCaa > 1:3064234/1‑100 (MQ=255)
tGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCaaa > 2:3474275/1‑100 (MQ=255)
tGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCaaa > 1:1465540/1‑100 (MQ=255)
ggCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCaaaa < 1:2064291/100‑1 (MQ=255)
ggCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCaaaa > 1:1482909/1‑100 (MQ=255)
gCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCaaaaa < 2:823461/100‑1 (MQ=255)
gCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCaaaaa > 1:2953556/1‑100 (MQ=255)
cTCATCTTCTTCCTGTGATTCCGGGTAGTGATCTTGCGCTTCCACGATATTCATTTTGCTGGAAAAGTAAGCCGGTGCCATGCTGAGCTTCTTCaaaaa < 1:3031746/99‑1 (MQ=255)
cTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCaaaaaa > 1:3884099/1‑100 (MQ=255)
tCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAg < 1:3480177/100‑1 (MQ=255)
cATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGt > 2:41800/1‑100 (MQ=255)
ccTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGAt < 2:2251795/100‑1 (MQ=255)
ccTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGAt < 2:1235099/100‑1 (MQ=255)
ccTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGAt < 2:2650848/100‑1 (MQ=255)
cTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGAt < 2:166451/99‑1 (MQ=255)
cTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATc > 1:3840391/1‑100 (MQ=255)
tCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGt > 2:1902171/1‑100 (MQ=255)
tCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGt > 2:844303/1‑100 (MQ=255)
tCCAGTGATTCCGGGTAGAGATATTGCGCTACCACGATATTCATATTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCg > 2:958190/1‑99 (MQ=255)
ccAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGtt > 1:2541617/1‑100 (MQ=255)
ccAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGtt > 1:248660/1‑100 (MQ=255)
ccAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGtt > 1:1082287/1‑100 (MQ=255)
cAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTc > 2:1911836/1‑100 (MQ=255)
cAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTc > 1:1575277/1‑100 (MQ=255)
aGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGATGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGttag > 2:3377432/1‑98 (MQ=255)
gTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGc > 2:236075/1‑100 (MQ=255)
gATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCtn < 2:1436248/100‑2 (MQ=255)
aTTCCGGGTAGAGATCTTGCGCTACCACTATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTc < 1:912302/99‑1 (MQ=255)
aTTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTcc < 2:712044/100‑1 (MQ=255)
ttCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCa > 1:379188/1‑100 (MQ=255)
ttCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCa > 2:1543141/1‑100 (MQ=255)
ccGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCaaa < 2:3840352/100‑1 (MQ=255)
cGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAAt > 2:3411295/1‑100 (MQ=255)
ggTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATcc < 2:1058478/100‑1 (MQ=255)
ggTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATcc < 2:2442545/100‑1 (MQ=255)
gTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATcc < 2:1031453/99‑1 (MQ=255)
tAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCaa < 2:2971395/100‑1 (MQ=255)
agagATCTTGCGCTACCACGATATTCATTTTGCTTGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAAc < 1:1309970/100‑1 (MQ=255)
agagATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAAc < 1:1997027/100‑1 (MQ=255)
gagaTCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAAcc < 2:3639174/100‑1 (MQ=255)
gagaTCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGATGAGCTTATTCAAAAAAATCAGATCGTTCGCTCCAAATCCAAcc > 1:1519323/1‑100 (MQ=255)
gaTCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACctc > 2:2526945/1‑100 (MQ=255)
gaTCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACctc > 1:50543/1‑100 (MQ=255)
tCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCtctt > 2:2019392/1‑100 (MQ=255)
tCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCtctt > 2:9051/1‑100 (MQ=255)
cTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCtcttc > 2:2658832/1‑100 (MQ=255)
tGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTcttctt > 2:2901587/1‑100 (MQ=255)
cgcTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCtttt < 2:3039742/100‑1 (MQ=255)
gcTACCATGATATTCATTTTTCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTa < 1:862421/100‑1 (MQ=255)
tACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGc > 1:2581012/1‑100 (MQ=255)
aCCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCt > 1:641653/1‑100 (MQ=255)
aCCACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCt > 2:1807315/1‑100 (MQ=255)
ccACGATATTCATTTTGCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTc > 2:3056240/1‑100 (MQ=255)
ccACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTc > 1:2144166/1‑100 (MQ=255)
cACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTcg > 1:3119664/1‑100 (MQ=255)
cACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTcg > 2:267850/1‑100 (MQ=255)
aCGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTcgc < 1:1752112/100‑1 (MQ=255)
ctatatTCACTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTcgag < 2:1744777/98‑3 (MQ=255)
cGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTcgcg > 1:2428146/1‑100 (MQ=255)
atatTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGt < 2:1265119/100‑1 (MQ=255)
tatTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGtt > 2:1965560/1‑100 (MQ=255)
atTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTGCGCTCTAAATCCAACCTCTTCTTTTAGCTCGCGGTTa > 2:2636057/1‑100 (MQ=255)
cATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCg < 2:2763321/100‑1 (MQ=255)
cATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCg < 2:3420776/100‑1 (MQ=255)
aTTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCgg > 1:1657724/1‑100 (MQ=255)
tttGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCt > 1:1249598/1‑100 (MQ=255)
tGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTc < 1:3095698/100‑1 (MQ=255)
gCTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCg < 2:481836/100‑1 (MQ=255)
gCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCg > 1:2270402/1‑100 (MQ=255)
cTGGAAAAGTAAGGCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTAGCGGTTAGCGGCTTCGt > 1:1816004/1‑100 (MQ=255)
cTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGt > 1:3447319/1‑100 (MQ=255)
ggAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAANAGTNAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAg > 1:352736/1‑100 (MQ=255)
ggAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAg > 2:3562725/1‑100 (MQ=255)
gAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAgg > 2:3165466/1‑99 (MQ=255)
gAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGa < 2:1407223/100‑1 (MQ=255)
aaaaGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGAc < 1:3259137/100‑1 (MQ=255)
aGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCt > 2:1867848/1‑100 (MQ=255)
tAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCttt < 2:2544321/100‑1 (MQ=255)
taGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCTTTc < 2:214688/99‑1 (MQ=255)
aaGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCTTTc > 2:1933974/1‑100 (MQ=255)
gACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCTTTCAc > 1:3600458/1‑100 (MQ=255)
aCGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCTTTCAcc < 2:3826369/100‑1 (MQ=255)
|
GCCAGCGCACCTGTGGTAGCGGCTCTGGCTCATCGCCTTCCAGTGATTCCGGGTAGAGATCTTGCGCTACCACGATATTCATTTTGCTGGAAAAGTAAGACGGTGCCATGCTGAGCTTCTTCAAAAAAGTCAGATCGTTCGCTCCAAATCCAACCTCTTCTTTTAGCTCGCGGTTAGCGGCTTCGTAGACGCTTTCACC > NC_000913/3525699‑3525897
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
