Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,639,879 |
(T)8→7 |
100% |
intergenic (‑159/‑232) |
uspB ← / → uspA |
universal stress (ethanol tolerance) protein B/universal stress global response regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,639,872 | 0 | T | . | 95.6%
| 657.1
/ 15.7
| 155 | intergenic (‑152/‑239) | uspB/uspA | universal stress (ethanol tolerance) protein B/universal stress global response regulator |
| Reads supporting (aligned to +/- strand): ref base T (4/1); new base . (74/74); total (80/75) |
| Fisher's exact test for biased strand distribution p-value = 3.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.65e-01 |
Only 100 of 176 total aligned reads displayed.
ATACGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTC > NC_000913/3639775‑3639967
|
aTACGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATACTGTAGGAGATCAGGTTGttt < 2:2385492/100‑1 (MQ=255)
tACGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttt < 2:1127879/100‑1 (MQ=255)
tACGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttt < 2:2715270/100‑1 (MQ=255)
aCGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttt < 1:3737566/100‑1 (MQ=255)
cGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttt < 1:3700130/100‑1 (MQ=255)
gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt < 1:3713681/100‑1 (MQ=255)
cTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATAAGGTTGtttttttc > 1:2620545/1‑99 (MQ=255)
tGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttcc < 1:1997035/100‑3 (MQ=255)
tGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttcc < 1:592107/100‑3 (MQ=255)
gCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttcca < 1:35354/100‑4 (MQ=255)
cAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGa < 2:3294255/100‑1 (MQ=255)
cAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGa > 1:1229722/1‑100 (MQ=255)
aaTCATTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGTTAACCAACATACGAGCGGCTTTATAGATAGTGTATGAGATCAGGTTG‑TTTTTTTCCAGa < 2:3294715/99‑1 (MQ=255)
aaTCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttccag < 1:1899074/98‑5 (MQ=255)
aTCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt > 2:236609/1‑93 (MQ=255)
tCAGTTAACACCAGGTCCTTGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAgg < 1:1597154/100‑1 (MQ=255)
tCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATTGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAgg < 2:2086158/100‑1 (MQ=255)
tCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAgg > 1:1274018/1‑100 (MQ=255)
tCAGTTAACAACAGGTCCTGGAGAAACCTCTGTGGTGATGACCAACACACGAGCGGCTATGTAGATAGTGTAGAAGATCAGGTTCtttattcgcaca > 2:1528392/1‑91 (MQ=255)
cAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGt > 2:3299028/1‑100 (MQ=255)
cAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAAATCAGGTTG‑TTTTTTTCCAGAAGGt > 2:1749114/1‑100 (MQ=255)
aGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGtt > 1:1927741/1‑100 (MQ=255)
gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTa > 1:3879311/1‑100 (MQ=255)
aaCACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAAcc < 2:1596704/100‑1 (MQ=255)
cacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTATAGGAAATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCa > 1:645189/1‑99 (MQ=255)
ccAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTa < 2:210053/100‑1 (MQ=255)
ccAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTa < 2:442467/100‑1 (MQ=255)
aGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGTCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATc < 1:2383177/100‑1 (MQ=255)
ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCTGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAata < 1:3300842/100‑1 (MQ=255)
ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAata > 1:1868897/1‑100 (MQ=255)
ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAata < 2:1134523/100‑1 (MQ=255)
ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑ATTTTTTCCAGAAGGTTAACCACTATCAata > 1:1483513/1‑100 (MQ=255)
ataaaCCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTc < 1:763534/98‑1 (MQ=255)
gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATAttta > 2:2213652/1‑98 (MQ=255)
gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCa > 1:1452541/1‑100 (MQ=255)
gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCa < 1:3594344/100‑1 (MQ=255)
aaaCCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCAt > 1:2694598/1‑100 (MQ=255)
aaCCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATg > 2:918130/1‑100 (MQ=255)
tccgatctgtgGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTc < 2:2667576/93‑1 (MQ=255)
ccGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTc < 1:1238734/100‑1 (MQ=255)
cGCTTTTGTGGTGACCAACATACGTGCGGCTCTATAGAGAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATg < 2:1693816/97‑1 (MQ=255)
cGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGATTAACCAATATCAATATATTCATGTCg > 1:1115684/1‑100 (MQ=255)
gCTTTTGTGGTGACCAACATACGAGCGGCTCTATAAATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTACCCACTATCAATATATTCATGTCg < 2:2545315/99‑1 (MQ=255)
tgtgGTGACCAACATACGAGCGGCTCTCTAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCATAAGGTTAAACACTATCAATATATTCATGTCGaaa > 1:2602696/1‑97 (MQ=255)
gtggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAAAAGGTTAACCACTATCAATATATTCATGTCGCAAAtt > 2:3703985/1‑99 (MQ=255)
tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTATCCACTATCAATATATTCATGTCGAAAATTTg < 2:1370483/100‑1 (MQ=255)
tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTg < 1:1960890/100‑1 (MQ=255)
tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTg < 2:3407356/100‑1 (MQ=255)
ggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGt > 2:1728758/1‑100 (MQ=255)
ggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGt > 1:3063728/1‑100 (MQ=255)
ggtgACAAACATACGAGCGGCTCTATAGATATTGTAGGAGATCATGTTG‑TTTTTTTCCAGAATGTTAACCACTATCAATATATTCATGTCGAAAATTTGt < 2:2980916/100‑1 (MQ=255)
gtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 2:2689930/100‑1 (MQ=255)
gtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 2:1886114/100‑1 (MQ=255)
gtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 1:237541/100‑1 (MQ=255)
gtgAACAACATACGAGCGGCTATATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 1:3526852/100‑1 (MQ=255)
ccgatctaCATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 1:2849199/93‑1 (MQ=255)
gACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGACGGTTAACCACTATCAATATATTCATGTCGAAATTTTGTTTa > 2:1696369/1‑100 (MQ=255)
gACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTa < 1:3368947/100‑1 (MQ=255)
aCCAACATACGTGGTGCTCTATAGTTAGTGTAGGAGTTTAGGTTG‑TTTTTTTCCAGAAGGTTTACCTTTATCATTATATTCCTGTCGAAAATTTg < 2:2422640/95‑1 (MQ=255)
aCCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAt < 1:2233415/100‑1 (MQ=255)
cAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCATGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc < 1:498001/99‑1 (MQ=255)
cAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCATAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAtat > 1:2549265/1‑98 (MQ=255)
aaCATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTa > 2:600293/1‑100 (MQ=255)
ncATACGAGCGGCTCTATAGATAGAGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTTTTTATCt > 2:1329320/2‑98 (MQ=255)
aCATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGttagatcgg > 2:2849173/1‑93 (MQ=255)
cATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAAc < 2:3051364/100‑1 (MQ=255)
aTACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTTGAAAATTTGTTTATCTAACg < 2:422854/100‑1 (MQ=255)
aTACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACg < 1:2175183/100‑1 (MQ=255)
tACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGa > 1:1981424/1‑100 (MQ=255)
aCGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAg > 1:3408774/1‑100 (MQ=255)
gAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTa < 1:3830494/100‑1 (MQ=255)
aGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTaa > 1:314200/1‑100 (MQ=255)
gCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAg < 1:2521874/100‑1 (MQ=255)
ggCTCTATAGATAGTGTAGGAGATCA‑GTTTTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGt < 1:129149/95‑1 (MQ=255)
gCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCaa > 1:3750773/1‑100 (MQ=255)
ctATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGc > 1:1101931/1‑100 (MQ=255)
tataGATAGTGTAGGAGATCAGG‑TGGTTTTTTTCTAGAAGGGGAACCACTATCAATATATTCATGTCGAAAATTTGTTGATCTAACGAGTAAGCAAGGCg > 2:321557/1‑100 (MQ=255)
tagatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGa < 2:3597327/100‑1 (MQ=255)
agatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAt > 1:1994453/1‑100 (MQ=255)
agatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAt < 1:3013529/100‑1 (MQ=255)
tagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAACTAACGAGTAAGCAAGGCGGATTGa > 1:546232/1‑100 (MQ=255)
gtgtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGATAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg < 2:581215/100‑1 (MQ=255)
gtgtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGAca > 2:3398393/1‑99 (MQ=255)
gtgtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg > 2:297705/1‑100 (MQ=255)
gtgtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg < 2:3893007/100‑1 (MQ=255)
gtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGa > 2:2008610/1‑100 (MQ=255)
gtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAAAGAGTAAGCAAGGCGGATTGACGGa > 1:915005/1‑100 (MQ=255)
tAGGAGATCAGGGTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCAAAAATTTGTTTAACTAACGAGTAAGCAAGGCGGATTGACGGat > 1:3274169/1‑100 (MQ=255)
aGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatc < 2:2063876/100‑1 (MQ=255)
ggAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatca > 1:1770354/1‑100 (MQ=255)
ggAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatca > 2:717618/1‑100 (MQ=255)
gagaTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTTACGAGTAAGCAAGGCGGATTGACGGatca < 2:2823041/99‑1 (MQ=255)
agaTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatcatc > 1:475108/1‑100 (MQ=255)
aTCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATATAAAGGGTAAGCAAGGCAAATTGACGGATCATcc > 1:1529133/1‑100 (MQ=255)
tCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCgg < 1:3647150/100‑1 (MQ=255)
tCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCgg < 2:3408736/100‑1 (MQ=255)
cAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCTATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCggg < 1:243613/100‑1 (MQ=255)
aGGTTG‑TTTTGTTCCAGAAAGTTAAAAACTATCAATATATAAATGTCGAAAATTTGTTTAACTAAAGAGTAAGAAAGGCGGATTGAAGAatcatcag > 2:3498537/1‑95 (MQ=255)
ggTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTc < 2:809478/100‑1 (MQ=255)
ggTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATATAACGAGTAAGAAAAGCGGATTGACGGAGCATCCgggcc > 1:3012813/1‑98 (MQ=255)
|
ATACGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTC > NC_000913/3639775‑3639967
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
