Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F169 I0 R1
|
76 |
156.9 |
7610945 |
95.9% |
7298896 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,639,879 |
(T)8→7 |
100% |
intergenic (‑159/‑232) |
uspB ← / → uspA |
universal stress (ethanol tolerance) protein B/universal stress global response regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,639,872 | 0 | T | . | 94.9%
| 570.8
/ 17.3
| 136 | intergenic (‑152/‑239) | uspB/uspA | universal stress (ethanol tolerance) protein B/universal stress global response regulator |
| Reads supporting (aligned to +/- strand): ref base T (3/2); new base . (67/62); total (71/65) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.93e-01 |
Only 100 of 154 total aligned reads displayed.
CGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTC > NC_000913/3639778‑3639967
|
cGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttt < 1:1032981/100‑1 (MQ=255)
gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt < 2:1209809/100‑1 (MQ=255)
gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt < 2:1568271/100‑1 (MQ=255)
gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt < 2:117249/100‑1 (MQ=255)
gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCACTATAGATAGTGTAGGAGATCAGGTTGtttttt > 1:745154/1‑99 (MQ=255)
cTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttc < 1:1548523/100‑2 (MQ=255)
gCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTTTTTTTTTTTTCATACGAGCGGCTCTACAGATAGTGTAGGAGATCAGGTTGttttttt > 1:606741/1‑97 (MQ=255)
gCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttcca < 1:3150854/100‑4 (MQ=255)
ccAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCa < 2:3403427/100‑1 (MQ=255)
ccAATCAGTTAACACCAGGTCCTGGAGAAACCGCGTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttccag < 1:352723/100‑5 (MQ=255)
aaTCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGaa > 2:1043058/1‑100 (MQ=255)
tCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAgg < 1:2915702/100‑1 (MQ=255)
aGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGACAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGtt > 2:620894/1‑100 (MQ=255)
gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCGACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGt < 1:1790684/98‑1 (MQ=255)
gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCATAAGCTTa > 1:918078/1‑100 (MQ=255)
gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTa > 2:1487749/1‑100 (MQ=255)
gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTa < 1:1027139/100‑1 (MQ=255)
ttAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTaa < 1:3731771/100‑1 (MQ=255)
tAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAAc > 2:215101/1‑100 (MQ=255)
tAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAAc > 2:1084548/1‑100 (MQ=255)
aaCACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAAc > 1:1237755/1‑99 (MQ=255)
aaCACCAGGTCCTGGAGAAACCGCTTTTGGGGTGACGAACACACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAAcc < 1:2372530/100‑1 (MQ=255)
acacCAGGTCCTGGAGATACTGCTGTTGTGGTGACCGATTGAGTAGCTGTGCTATAGATAGTGTAGGAGATTAGGTTG‑TTTTTTTCCTGAAGGTTAAcc < 1:671681/99‑1 (MQ=255)
acacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCa < 2:848579/100‑1 (MQ=255)
cacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCa > 2:2161348/1‑100 (MQ=255)
cacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCAc > 2:1695437/1‑100 (MQ=255)
ccAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTa > 2:893667/1‑100 (MQ=255)
aGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATc < 2:1804039/100‑1 (MQ=255)
ggTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCa > 1:3333258/1‑100 (MQ=255)
gTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGACCAGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTATCCACTAt < 1:573119/97‑1 (MQ=255)
tCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAat < 1:1188790/100‑1 (MQ=255)
ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAata > 2:1550256/1‑100 (MQ=255)
ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAat < 1:51369/99‑1 (MQ=255)
tGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAatata < 1:50839/100‑1 (MQ=255)
ggAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAatatat > 1:2058581/1‑100 (MQ=255)
gagaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATAtt > 2:102713/1‑100 (MQ=255)
agaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTc < 1:1902943/100‑1 (MQ=255)
gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCa < 2:1228481/100‑1 (MQ=255)
gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TGTTTTTCCAGAAGGTTAACCACTATCAATATAtt > 1:2536257/1‑98 (MQ=255)
gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGGAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAATAACTATCAATATAtt > 1:2535144/1‑98 (MQ=255)
aaCCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATg < 1:831647/100‑1 (MQ=255)
cGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCg < 2:220/100‑1 (MQ=255)
cTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGaa < 2:3476060/100‑1 (MQ=255)
cTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGaa > 2:385617/1‑100 (MQ=255)
tttGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGaaaa > 2:3294257/1‑100 (MQ=255)
gtggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAAttt > 2:3202623/1‑100 (MQ=255)
gtggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAAttt > 2:3039029/1‑100 (MQ=255)
tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTg < 2:135888/100‑1 (MQ=255)
tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTg < 2:575463/100‑1 (MQ=255)
ggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGt < 1:3178587/100‑1 (MQ=255)
gtgACCAACATATGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 1:715045/100‑1 (MQ=255)
gtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt < 2:2748617/100‑1 (MQ=255)
gACCAACATACGAGCGGCACTATAGATAGTGTAGGAGATCAGGTT‑ATTTTTTTCCAGAAGGTTAACAAATAACAAAATATGCAGGTCGAACATTTGttt > 1:2224647/1‑99 (MQ=255)
nccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAt > 2:3309225/2‑100 (MQ=255)
aCCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAt > 2:365803/1‑100 (MQ=255)
ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc > 2:2287797/1‑100 (MQ=255)
ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc > 2:2467202/1‑100 (MQ=255)
ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc > 2:970216/1‑100 (MQ=255)
ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc > 1:1918730/1‑100 (MQ=255)
ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc > 1:3401613/1‑100 (MQ=255)
ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTT‑CTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc < 1:2434492/100‑1 (MQ=255)
cAACATAAGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc > 2:1982698/1‑99 (MQ=255)
aCATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTaa < 2:3000940/100‑1 (MQ=255)
cATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAAc < 1:3278839/100‑1 (MQ=255)
aTACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACg < 1:3414262/100‑1 (MQ=255)
tACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGa > 1:1185734/1‑100 (MQ=255)
aCGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAg < 1:1016015/100‑1 (MQ=255)
aCGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAg < 1:2092249/100‑1 (MQ=255)
ggCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCa > 2:2037882/1‑100 (MQ=255)
gCTCTATAGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCaa > 2:767126/1‑100 (MQ=255)
tataGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCg < 1:1112325/100‑1 (MQ=255)
tataGATAGTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACAACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCg > 2:1870061/1‑100 (MQ=255)
atagatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCgg < 2:788939/100‑1 (MQ=255)
atagatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATATCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCgg > 2:43687/1‑100 (MQ=255)
tagatagTGTAGGAGATCAGGTTGTTTTTTTT‑CTTAATTTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAg > 1:1091363/1‑95 (MQ=255)
tagatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAATCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCg > 1:1100144/1‑98 (MQ=255)
agatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAt > 1:1997473/1‑100 (MQ=255)
gatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAtt > 2:2425214/1‑100 (MQ=255)
gatagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAtt > 1:785534/1‑100 (MQ=255)
atagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTg < 2:2982872/100‑1 (MQ=255)
atagTGTAGGAGATCAGGTTG‑TTTTTTGCGAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTg < 1:779920/100‑1 (MQ=255)
tagTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGa > 1:1390764/1‑100 (MQ=255)
agTGTAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGAc < 1:1061700/100‑1 (MQ=255)
gtgtAGGAGATCAGGTTGTTTTTTTT‑TTTTTTTTTTACCACTATCAATATATTCATGTCTTTTATTTGTTTATCTAACGAGTAAGCAAGGctgctt > 1:547180/1‑91 (MQ=255)
gtgtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg < 1:1084543/100‑1 (MQ=255)
tgtAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg < 1:2161339/100‑1 (MQ=255)
gtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGTTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg > 1:1828109/1‑98 (MQ=255)
gtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACgca > 1:1828219/1‑98 (MQ=255)
gtAGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGa > 2:2777650/1‑100 (MQ=255)
aGGAGATCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatc > 1:1368977/1‑100 (MQ=255)
gagaTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatcat < 2:732206/100‑1 (MQ=255)
gagaTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatcat < 2:564989/100‑1 (MQ=255)
gaTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATcc < 1:861593/100‑1 (MQ=255)
gaTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATcc < 2:2900415/100‑1 (MQ=255)
aTCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCg > 2:271636/1‑100 (MQ=255)
tCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCgg > 2:2905232/1‑100 (MQ=255)
tCAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCgg < 1:750978/100‑1 (MQ=255)
cAGGTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCggg > 2:1333580/1‑100 (MQ=255)
ggTTG‑TTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTc < 2:1701131/100‑1 (MQ=255)
ttgttTTTTTT‑CAGAAAGTTAACCACTATCAATAAAGTCAAGGGGAAAATTTGGTTATGTAACGAGTGAGCCAGGCTGTTTGTCgg > 1:2869775/1‑86 (MQ=255)
|
CGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTC > NC_000913/3639778‑3639967
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
