Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F181 I1 R1
|
66 |
119.2 |
5981814 |
94.9% |
5676741 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,038,330 |
(T)5→6 |
coding (493/711 nt) |
dsbC ← |
protein disulfide isomerase II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,038,325 | 1 | . | T | 95.7%
| 405.0
/ 9.4
| 115 | coding (498/711 nt) | dsbC | protein disulfide isomerase II |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base T (55/55); total (58/57) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 |
Only 100 of 129 total aligned reads displayed.
AACGCCAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑TTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGTGATCC > NC_000913/3038226‑3038419
|
aaCGCCAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTg > 2:2866783/1‑100 (MQ=255)
aaCGCCAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTg < 2:1585758/100‑1 (MQ=255)
aaCGCCAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTg > 1:1712433/1‑100 (MQ=255)
cGCCAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑tt > 2:2990181/1‑100 (MQ=255)
ccAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGCCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑tttt > 2:1075526/1‑100 (MQ=255)
cAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑ttttt < 2:530238/100‑1 (MQ=255)
aaGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑tttttt > 2:2272894/1‑99 (MQ=255)
aGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑tttttta > 2:947953/1‑98 (MQ=255)
aGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑tttttta < 1:975284/100‑3 (MQ=255)
gCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑ttttttat < 2:2600672/100‑4 (MQ=255)
cTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑ttttttatc < 1:1528890/100‑5 (MQ=255)
aCGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTc < 2:528401/100‑1 (MQ=255)
aCGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTc > 1:732522/1‑100 (MQ=255)
cGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCg < 1:2231154/100‑1 (MQ=255)
ccAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGca > 2:2260151/1‑100 (MQ=255)
cAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACTTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGcac > 2:2089958/1‑100 (MQ=255)
cAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGcac > 1:2625493/1‑100 (MQ=255)
aGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATTATCAAACGCTTTGTTTTTTATCTTTCGCacac < 1:2831558/100‑1 (MQ=255)
aGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCacac > 1:2032669/1‑100 (MQ=255)
aGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCacac < 2:2978717/100‑1 (MQ=255)
gTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACAcc < 1:1982705/100‑1 (MQ=255)
gTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACAcc < 2:2927578/100‑1 (MQ=255)
cGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGa < 1:2526469/100‑1 (MQ=255)
gTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGAt > 1:406049/1‑100 (MQ=255)
gTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGAt > 2:2815692/1‑100 (MQ=255)
tAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATa < 2:694737/100‑1 (MQ=255)
aTGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGc < 1:1648719/100‑1 (MQ=255)
ggTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCtt > 1:2439024/1‑100 (MQ=255)
ggTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCtt > 1:2206124/1‑100 (MQ=255)
gTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCttt > 1:1022229/1‑100 (MQ=255)
tCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTc > 2:1255092/1‑100 (MQ=255)
tCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTc < 2:2975899/100‑1 (MQ=255)
cGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCa > 1:2567161/1‑100 (MQ=255)
ggCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCAt > 2:2306562/1‑100 (MQ=255)
cAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCAttt > 2:1268859/1‑100 (MQ=255)
tcttCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑TTTTTATCTTTCGCACACCAGATAGCTTTCAtttctt < 2:1891630/97‑1 (MQ=255)
atatCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCAtttct < 2:504828/100‑1 (MQ=255)
tatCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑TTTTTATCTTTCGCACACCAGATAGCTTTCAtttcttt > 2:2169377/1‑100 (MQ=255)
tCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCAtttctttc > 1:1400200/1‑100 (MQ=255)
tCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑TTTTTATCTTTCGCACACCAGATAGCTTTCAtttcttaga > 1:1891641/1‑97 (MQ=255)
cACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTtctc > 2:1803160/1‑100 (MQ=255)
cACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCAATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTtctc > 1:554267/1‑100 (MQ=255)
cGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTg < 2:787289/100‑1 (MQ=255)
cGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTg < 2:1575311/100‑1 (MQ=255)
gCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATc > 1:392433/1‑100 (MQ=255)
aaCTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGc < 2:2173824/100‑1 (MQ=255)
aaCTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGc < 1:2664641/100‑1 (MQ=255)
aaCTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGc < 1:680680/100‑1 (MQ=255)
ctggctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTg > 1:38537/1‑100 (MQ=255)
ggctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTc > 1:189766/1‑100 (MQ=255)
ggctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTc > 1:1192490/1‑100 (MQ=255)
ggctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTc < 1:211952/100‑1 (MQ=255)
ggctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTc > 2:634283/1‑100 (MQ=255)
gctggTGCGTCGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTcc < 2:2396467/100‑1 (MQ=255)
gctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTcc < 1:460660/100‑1 (MQ=255)
gctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTcc < 1:461478/100‑1 (MQ=255)
gctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTcc < 2:1397382/100‑1 (MQ=255)
gctggTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTcc > 1:300449/1‑100 (MQ=255)
tGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGccc < 2:851126/100‑1 (MQ=255)
gCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGcccc > 1:1080730/1‑100 (MQ=255)
gtcGCTTTTACCTGCGAGCACATCAGCAAACGCTTTGTTTTTTATCTTTCTCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGcccc < 2:2530083/96‑1 (MQ=255)
gACGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTg > 2:1668355/1‑100 (MQ=255)
cGCTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGgc < 2:897230/100‑1 (MQ=255)
cTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGgcgc > 1:2378381/1‑100 (MQ=255)
cTTTTACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGgcgc > 2:278073/1‑100 (MQ=255)
tttACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCgg < 1:947957/100‑1 (MQ=255)
ttACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCggg < 1:668027/100‑1 (MQ=255)
ttACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCgg < 1:2990197/99‑1 (MQ=255)
ttACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCgg < 2:2803178/99‑1 (MQ=255)
tACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCggg > 2:1352369/1‑99 (MQ=255)
tACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGa > 1:322312/1‑100 (MQ=255)
tACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGa > 1:1297926/1‑100 (MQ=255)
tACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGa > 2:2108102/1‑100 (MQ=255)
tACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGa > 2:1352278/1‑100 (MQ=255)
tACCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGa > 1:578080/1‑100 (MQ=255)
aCCTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGaa > 1:892656/1‑100 (MQ=255)
ccTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGaaa < 1:2306576/100‑1 (MQ=255)
ccTGCCATCACATCATCAAACGCTTTGTTTTTTAGCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGaaa < 1:2041644/100‑1 (MQ=255)
cTGCCATCACATCGTCAAACGCTTTGTTTTTTATCTTTAGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAg > 2:1844507/1‑100 (MQ=255)
cTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAg < 1:629771/100‑1 (MQ=255)
cTGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAg > 1:2068287/1‑100 (MQ=255)
tGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGTATCGCTGTCCAGCCCCTGGCGCGGGaaa > 2:504499/1‑98 (MQ=255)
tGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGc > 2:203075/1‑100 (MQ=255)
tGCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGc < 2:1092589/100‑1 (MQ=255)
gCCATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCa > 1:2693589/1‑100 (MQ=255)
ccATCACATCATCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCaa < 1:2866799/100‑1 (MQ=255)
catcacatcaTCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAg > 2:1644343/1‑100 (MQ=255)
catcacatcaTCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAg < 2:1297919/100‑1 (MQ=255)
catcatCAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAAc < 1:899363/100‑1 (MQ=255)
atcatcAAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACg > 2:1944840/1‑100 (MQ=255)
catcaAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCa > 1:2294734/1‑100 (MQ=255)
atcaAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGc < 1:1846248/98‑1 (MQ=255)
caAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACgg < 1:2641911/100‑1 (MQ=255)
caAACGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACgg > 2:1192162/1‑100 (MQ=255)
aaaCGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGt < 1:1352285/100‑1 (MQ=255)
aaaCGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGt < 2:2206112/100‑1 (MQ=255)
aaaCGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGt < 1:1352376/100‑1 (MQ=255)
aCGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGTg < 2:2642681/99‑1 (MQ=255)
aCGCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGTGa < 2:2675382/100‑1 (MQ=255)
gCTTTGTTTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGTGATc < 2:1980001/100‑1 (MQ=255)
|
AACGCCAAGCTGGACGCCAAGTGCGTAATGGTCGGCAATATCCACGTCGCAACTGGCTGGTGCGACGCTTTTACCTGCCATCACATCATCAAACGCTTTG‑TTTTTATCTTTCGCACACCAGATAGCTTTCATTTCTTTCTCTGCATCGCTGTCCAGCCCCTGGCGCGGGAAAGCAAGATAACGCACGGTGATCC > NC_000913/3038226‑3038419
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
