Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F232 I1 R1
|
72 |
114.8 |
5816246 |
94.5% |
5496352 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,976,311 |
(A)8→7 |
intergenic (‑297/‑288) |
aas ← / → galR |
fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase/galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,976,304 | 0 | A | . | 98.6%
| 617.0
/ 1.1
| 138 | intergenic (‑290/‑295) | aas/galR | fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase/galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base . (56/80); total (57/81) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 |
Only 100 of 152 total aligned reads displayed.
TGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGC > NC_000913/2976205‑2976399
|
tGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCa > 1:2567430/1‑100 (MQ=255)
tGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCa > 2:716363/1‑100 (MQ=255)
cgacgaCTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGATACTGTTACAGATTGCTGACCGGCaaaaa > 1:1919402/1‑100 (MQ=255)
gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTATATTGTCGGTTTCTGTTACAGATTGATGATCGGCaaaaaaacc < 2:1955750/100‑3 (MQ=255)
gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacc > 2:1200438/1‑98 (MQ=255)
ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacctg < 1:2006460/100‑5 (MQ=255)
ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacctg > 2:1447701/1‑96 (MQ=255)
ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacctg > 1:479050/1‑96 (MQ=255)
ctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTgcg > 1:47368/1‑100 (MQ=255)
tCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCa < 2:174477/100‑1 (MQ=255)
cGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGAGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAt > 1:1613862/1‑100 (MQ=255)
gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATc > 1:1231525/1‑100 (MQ=255)
gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATc < 1:1950293/100‑1 (MQ=255)
ccAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCt > 1:2577870/1‑100 (MQ=255)
cAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATc < 1:2837854/98‑1 (MQ=255)
gCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTgcg > 1:2417344/1‑100 (MQ=255)
agaAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAg > 2:700653/1‑100 (MQ=255)
aaaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggt < 2:450034/100‑2 (MQ=255)
aaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCt < 2:441380/100‑1 (MQ=255)
aaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtt < 1:2132449/100‑3 (MQ=255)
aaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtt < 2:359830/100‑3 (MQ=255)
aCGCAAAGGAATGAAGGGAAATGCAACGATGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTgg < 1:1745086/100‑1 (MQ=255)
aCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTgg < 1:2711724/100‑1 (MQ=255)
aCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTgg > 2:1006667/1‑100 (MQ=255)
aCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtttt < 1:1187322/100‑5 (MQ=255)
cGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggttttt < 2:2747814/100‑6 (MQ=255)
cGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggttttt < 1:2161754/100‑6 (MQ=255)
gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGgtg > 2:102804/1‑100 (MQ=255)
gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtttttt < 1:1508534/100‑7 (MQ=255)
ctaaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGgtg < 1:1109767/98‑1 (MQ=255)
aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGgtgag > 2:1109785/1‑98 (MQ=255)
aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTa > 2:1331183/1‑100 (MQ=255)
aaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtttttttgc < 2:559605/100‑10 (MQ=255)
gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTc < 1:317797/100‑1 (MQ=255)
gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACAGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAtt > 2:586252/1‑100 (MQ=255)
aaTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCa < 2:2530939/100‑1 (MQ=255)
aTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt > 1:2672672/1‑100 (MQ=255)
aTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt < 2:394545/100‑1 (MQ=255)
aTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt > 2:13831/1‑100 (MQ=255)
tGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtg < 2:2094085/100‑1 (MQ=255)
tGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtg < 2:2269194/100‑1 (MQ=255)
tGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtg > 2:1526293/1‑100 (MQ=255)
aaGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtgtg < 2:2348081/100‑1 (MQ=255)
aaTGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAAc < 1:1169137/100‑1 (MQ=255)
aTGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAAcc < 1:2284026/100‑1 (MQ=255)
gCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCg > 1:979459/1‑100 (MQ=255)
gCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCg > 1:2004673/1‑100 (MQ=255)
aCGAGGGGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAg < 2:511366/100‑1 (MQ=255)
cGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGt < 2:989277/100‑1 (MQ=255)
gAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGtt > 2:2373106/1‑100 (MQ=255)
tgtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACt > 2:1580042/1‑100 (MQ=255)
gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt > 2:930148/1‑100 (MQ=255)
gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt > 1:503969/1‑100 (MQ=255)
gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt > 1:2030906/1‑100 (MQ=255)
gtgtAAATTGTCAGTTACTGTTACAGAGTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt < 1:1236969/100‑1 (MQ=255)
tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGAGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTc > 1:2391201/1‑100 (MQ=255)
gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCa < 2:1231543/100‑1 (MQ=255)
gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCa > 1:1804847/1‑100 (MQ=255)
gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCa < 2:612865/100‑1 (MQ=255)
gtAAAGTGTCTGTTACTGTTACAGATTGATGGCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGCGTTATTCATGTGCTCAACCCGAAGTTGACTTCa < 1:1905854/100‑1 (MQ=255)
aaaTTGTCGGTTACTGTTACAGATTGATGACTGGC‑AACAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc < 1:1951790/100‑1 (MQ=255)
aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AATAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc > 1:1563365/1‑100 (MQ=255)
aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc < 2:2522138/100‑1 (MQ=255)
aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc < 1:1428536/100‑1 (MQ=255)
aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc < 2:1936797/100‑1 (MQ=255)
aaTTGTCGGTTACAGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc < 1:586246/100‑1 (MQ=255)
nttGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGCGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTa > 1:1424160/2‑100 (MQ=255)
aTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTa > 2:2063393/1‑100 (MQ=255)
aTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTa < 2:1550042/100‑1 (MQ=255)
tGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc < 2:2883739/100‑1 (MQ=255)
tGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc > 1:350237/1‑100 (MQ=255)
tGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc < 2:479055/100‑1 (MQ=255)
cGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAAt < 2:1919429/100‑1 (MQ=255)
ttACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATAcc < 2:493652/100‑1 (MQ=255)
aCTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACctc > 2:2602149/1‑100 (MQ=255)
cTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACctct > 2:1658900/1‑100 (MQ=255)
tGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTg < 1:1447680/100‑1 (MQ=255)
gTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg < 1:102802/100‑1 (MQ=255)
gTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 2:38559/1‑100 (MQ=255)
gTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg > 2:1549794/1‑100 (MQ=255)
ttACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTggg > 2:1569185/1‑100 (MQ=255)
tACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGa > 2:459397/1‑100 (MQ=255)
cAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc > 2:2865211/1‑100 (MQ=255)
cAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc < 1:812759/100‑1 (MQ=255)
cAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc < 1:1655834/100‑1 (MQ=255)
aaaTTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca < 1:926935/98‑1 (MQ=255)
aGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca > 2:1175932/1‑100 (MQ=255)
gatggatgACCGGC‑AAAAAAGCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac < 1:2833333/100‑1 (MQ=255)
gATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac < 2:2192219/100‑1 (MQ=255)
gATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac > 2:1208924/1‑100 (MQ=255)
ttGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcacca > 2:1614173/1‑100 (MQ=255)
gatgaCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcaccac > 1:1664444/1‑99 (MQ=255)
tgaCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACttt > 2:978928/1‑100 (MQ=255)
aCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg < 2:350241/100‑1 (MQ=255)
aCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg < 2:663673/100‑1 (MQ=255)
aCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg < 1:978919/100‑1 (MQ=255)
ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc > 1:1641334/1‑100 (MQ=255)
ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc > 2:2469979/1‑100 (MQ=255)
ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc > 1:2305604/1‑100 (MQ=255)
ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAATCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc > 1:1851031/1‑100 (MQ=255)
|
TGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGC > NC_000913/2976205‑2976399
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
