Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F258 I0 R1
|
432 |
103.0 |
5191697 |
92.7% |
4812703 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,399,842 |
G→A |
22.1% |
V197V (GTG→GTA) |
miaA → |
delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,399,842 | 0 | G | A | 22.1%
| 204.0
/ 53.7
| 104 | V197V (GTG→GTA) | miaA | delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase |
| Reads supporting (aligned to +/- strand): ref base G (34/47); new base A (9/14); total (43/61) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.22e-01 |
Only 100 of 106 total aligned reads displayed.
CCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTC > NC_000913/4399744‑4399941
|
cacaAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCa < 2:1108104/100‑1 (MQ=255)
cacaAAGGCTTTCCCCGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTACGGAGACGCTCTACCGTATCAGGTGCa > 1:598341/1‑100 (MQ=255)
caAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATc > 2:1614269/1‑100 (MQ=255)
caAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATc < 2:1226949/100‑1 (MQ=255)
caAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATc < 2:523405/100‑1 (MQ=255)
caAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATc < 2:728530/100‑1 (MQ=255)
aaaGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCa < 1:302466/100‑1 (MQ=255)
aaGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAg < 1:1999201/100‑1 (MQ=255)
aaGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAg < 2:2211274/100‑1 (MQ=255)
gCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTc > 2:680144/1‑100 (MQ=255)
tttCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGc < 2:2523934/100‑1 (MQ=255)
tttCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGc < 2:2405101/100‑1 (MQ=255)
tCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCa < 2:285362/100‑1 (MQ=255)
cccGGGCACTGGAAGTTTTTTTCTTTTCGGGTAAAACGTTAACGGAACTGACGCAAACATCAGAAGACACGCTACCGTATCAGGTACAACAGTTCg > 1:1101777/1‑96 (MQ=255)
ccGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATc > 2:1446732/1‑100 (MQ=255)
ccGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATc > 2:1766846/1‑100 (MQ=255)
cGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCg < 1:793493/100‑1 (MQ=255)
cGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCg > 2:793496/1‑100 (MQ=255)
cGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCg > 2:653430/1‑100 (MQ=255)
aCTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCg > 2:1042803/1‑100 (MQ=255)
tGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc < 2:2044739/100‑1 (MQ=255)
ggAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc > 1:1667264/1‑99 (MQ=255)
ggAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc > 1:1245223/1‑99 (MQ=255)
ggAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCg > 2:651685/1‑100 (MQ=255)
aaGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAg < 2:1077995/100‑1 (MQ=255)
gTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGcc > 2:487668/1‑100 (MQ=255)
tttttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCg < 2:2571177/100‑1 (MQ=255)
tttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTg < 2:23728/100‑1 (MQ=255)
tttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTg < 2:2570299/100‑1 (MQ=255)
ttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCgaga > 1:1405186/1‑97 (MQ=255)
ttttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGa < 1:1877785/100‑1 (MQ=255)
tttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGaa > 2:2122436/1‑100 (MQ=255)
ttCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAAc < 2:358616/100‑1 (MQ=255)
tCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTAGCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACt < 1:1842230/100‑1 (MQ=255)
aTTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACt > 1:2349877/1‑98 (MQ=255)
aTTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGc > 1:2550757/1‑100 (MQ=255)
tttCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCt < 2:2297838/100‑1 (MQ=255)
tCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTcc > 1:1136930/1‑100 (MQ=255)
cGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCa > 1:1458788/1‑100 (MQ=255)
ggTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATc > 2:1613233/1‑100 (MQ=255)
gTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCa < 2:803362/100‑1 (MQ=255)
aaaCTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACg < 2:78743/100‑1 (MQ=255)
aaaCTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACg < 2:2378734/100‑1 (MQ=255)
aaCTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGc < 1:597043/100‑1 (MQ=255)
cTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCAt > 1:1563460/1‑100 (MQ=255)
cTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTACGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCAt < 1:477861/100‑1 (MQ=255)
tAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGa > 2:1237142/1‑100 (MQ=255)
aaCGGAACTTACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGag < 1:1961156/100‑1 (MQ=255)
aaCGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCCGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGAATTGag > 2:1235819/1‑100 (MQ=255)
acggaacggaCGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTCCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGagc < 1:1196521/100‑1 (MQ=255)
aCGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGagc < 2:2253785/100‑1 (MQ=255)
aCTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGt < 1:1583537/100‑1 (MQ=255)
aCTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGt < 2:683397/100‑1 (MQ=255)
cTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGtt < 1:924044/100‑1 (MQ=255)
tgacgtttgcGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGttt > 2:2592055/10‑100 (MQ=255)
tGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGttt < 2:1835245/100‑1 (MQ=255)
gacgtttgcGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGtttt > 1:1306935/9‑100 (MQ=255)
gACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGtttt < 1:1314395/100‑1 (MQ=255)
gACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGtttt > 2:2471147/1‑100 (MQ=255)
aCGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtc < 2:2177866/100‑1 (MQ=255)
aCGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtc > 1:116053/1‑100 (MQ=255)
cGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtca > 1:1039713/1‑100 (MQ=255)
cGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtca < 2:718186/100‑1 (MQ=255)
cGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtca < 1:1208470/100‑1 (MQ=255)
cGCAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtca > 2:1681336/1‑100 (MQ=255)
gCAAACGCCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCCCCATCCACGCAGTGAGCAGCGTTTtcat > 1:2434796/1‑100 (MQ=255)
cAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtcatc < 1:1512005/100‑1 (MQ=255)
cAAACGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTtcatc > 2:2383766/1‑100 (MQ=255)
aaCGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAg < 1:292996/100‑1 (MQ=255)
aaCGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAg < 1:688828/100‑1 (MQ=255)
aaCGTCAGGAGACGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAg < 2:2040907/100‑1 (MQ=255)
cGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGAt > 2:2315571/1‑100 (MQ=255)
ggAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTgg < 1:1613224/100‑1 (MQ=255)
gagaCGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGc < 2:1095553/100‑1 (MQ=255)
agaCGCTCTACCGTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCt < 2:2001754/100‑1 (MQ=255)
gaCGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCtt < 2:1025165/100‑1 (MQ=255)
ctctACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAgg < 1:2165775/100‑1 (MQ=255)
tctACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGt > 2:435645/1‑100 (MQ=255)
tctACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGt > 2:2097441/1‑100 (MQ=255)
tACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGttt > 1:2524274/1‑100 (MQ=255)
aCCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGtttt < 1:1446724/100‑1 (MQ=255)
ccGTATCAGGTGCATCAGTTCGCCATCGCCGCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTg < 1:1998734/100‑1 (MQ=255)
ccGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTg > 2:1426365/1‑100 (MQ=255)
ccGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTg < 1:1236993/100‑1 (MQ=255)
ccGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTg < 1:191980/100‑1 (MQ=255)
ccGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTg < 1:1237207/100‑1 (MQ=255)
cGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGa < 2:1906763/100‑1 (MQ=255)
gTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGaa < 1:1269471/100‑1 (MQ=255)
gTATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGaa < 2:2128836/100‑1 (MQ=255)
tATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGATTTGAAg > 1:646157/1‑100 (MQ=255)
tATCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAg < 2:1103923/100‑1 (MQ=255)
aTCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGc > 2:629806/1‑100 (MQ=255)
tCAGGTACATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAg > 2:1720332/1‑98 (MQ=255)
cAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCa > 2:1543485/1‑99 (MQ=255)
cAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAg < 2:1888659/100‑1 (MQ=255)
aGGTACATCTGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGa < 2:2185266/100‑1 (MQ=255)
gTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAg > 1:1110723/1‑100 (MQ=255)
gTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAg < 2:849629/100‑1 (MQ=255)
tGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGt > 2:830614/1‑100 (MQ=255)
gCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTc > 2:225746/1‑100 (MQ=255)
|
CCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTC > NC_000913/4399744‑4399941
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
