Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F228 I1 R1
|
66 |
128.3 |
6536509 |
94.2% |
6157391 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,249,448 |
T→C |
L25P (CTT→CCT) |
yqjD → |
membrane‑anchored ribosome‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,249,448 | 0 | T | C | 97.0%
| 444.3
/ ‑0.9
| 131 | L25P (CTT→CCT) | yqjD | membrane‑anchored ribosome‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base C (57/70); total (59/72) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 131 total aligned reads displayed.
CTACTTACTCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGAAACC > NC_000913/3249351‑3249545
|
ctactTACTCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTa < 2:1867857/100‑1 (MQ=255)
acttactCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGc > 2:1208498/1‑100 (MQ=255)
cttactCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCt > 1:1018080/1‑100 (MQ=255)
ttactCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTc < 2:2532435/100‑1 (MQ=255)
tactCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCa < 1:3112373/100‑1 (MQ=255)
ctCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATc > 1:1075193/1‑100 (MQ=255)
ctCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATc > 2:114244/1‑100 (MQ=255)
aCCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTgg > 1:1478459/1‑100 (MQ=255)
aCCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTgg > 1:754080/1‑100 (MQ=255)
ccTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTgg > 1:1819098/1‑99 (MQ=255)
ccTGGAGAAAACTATGTCGAAAGAACACACCACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGc < 2:2750361/100‑1 (MQ=255)
cTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCg < 2:842736/100‑1 (MQ=255)
cTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCg < 2:1356144/100‑1 (MQ=255)
tGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCga > 1:2351380/1‑100 (MQ=255)
ggAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCgag < 2:707959/100‑1 (MQ=255)
ggAGAAAACTATGTCGAAAGAACACACTACGGAACAGCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCgag < 1:2147884/100‑1 (MQ=255)
gaAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAg > 1:686341/1‑100 (MQ=255)
gaAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAg < 1:2594598/100‑1 (MQ=255)
aaaCTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTc < 1:2907099/100‑1 (MQ=255)
aaaCTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTc > 1:2683599/1‑100 (MQ=255)
aCTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGa < 1:2381386/100‑1 (MQ=255)
cTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGaa < 2:1465274/100‑1 (MQ=255)
tGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaaga < 1:3136631/100‑1 (MQ=255)
tGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaaga > 1:1296956/1‑100 (MQ=255)
tGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaag < 2:2266781/99‑1 (MQ=255)
gTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaagaa > 1:2233601/1‑100 (MQ=255)
gTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaagaa > 2:65294/1‑100 (MQ=255)
tCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaagaag > 1:1934879/1‑100 (MQ=255)
tCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaagaag < 1:1208512/100‑1 (MQ=255)
tCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAaagaag > 2:2831659/1‑100 (MQ=255)
cGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAagaaga > 2:3090702/1‑100 (MQ=255)
gAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAagag < 1:3030430/100‑1 (MQ=255)
gAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAagag > 1:549899/1‑100 (MQ=255)
aaaGAACACCCTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGt < 2:2136756/100‑1 (MQ=255)
aGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTg < 2:651931/100‑1 (MQ=255)
gAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGa > 2:2506328/1‑100 (MQ=255)
aaCACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAg < 2:335069/100‑1 (MQ=255)
aaCACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCAAAAGAAGAGTTGAg > 2:2219004/1‑100 (MQ=255)
atacacTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCAGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGt > 1:2203531/3‑100 (MQ=255)
cacacTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTa < 2:2233574/100‑1 (MQ=255)
cacacTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTa > 1:1685782/1‑100 (MQ=255)
acacTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTaa < 1:2239716/100‑1 (MQ=255)
acacTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTaa < 2:1075179/100‑1 (MQ=255)
cacTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAg < 1:1796698/100‑1 (MQ=255)
acTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGa < 2:2351353/100‑1 (MQ=255)
acTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGa < 1:3100459/100‑1 (MQ=255)
acTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGa < 1:615587/100‑1 (MQ=255)
cGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCg > 1:345641/1‑100 (MQ=255)
ggAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGt > 1:683585/1‑100 (MQ=255)
gAACGTCTGCGTGCTGAGGTTAAATCCCTTTCCGATACGCTGGAAGAGGTGCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTa < 1:2230062/100‑1 (MQ=255)
gAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTa < 2:940740/100‑1 (MQ=255)
gAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTa > 2:1362462/1‑100 (MQ=255)
aaCATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAg < 2:2815954/100‑1 (MQ=255)
aaCATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAg > 2:736034/1‑100 (MQ=255)
cATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCa > 2:162049/1‑100 (MQ=255)
tCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGTCGAGAAGGCGAAAGGAGAGTGGAGTAAGATTCGTAGCaaa > 1:1780896/1‑100 (MQ=255)
tCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCaaa > 2:930471/1‑100 (MQ=255)
cTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCaaa > 2:2104237/1‑99 (MQ=255)
cTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAg > 2:2882781/1‑100 (MQ=255)
cTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAg > 2:2502802/1‑100 (MQ=255)
cGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCgg < 2:1109133/100‑1 (MQ=255)
cGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCgg < 1:2819385/100‑1 (MQ=255)
cGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCgg < 1:2819346/100‑1 (MQ=255)
gTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGa < 1:114247/100‑1 (MQ=255)
tGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAg > 1:3265068/1‑100 (MQ=255)
gCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGc < 2:1018068/100‑1 (MQ=255)
cTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCa < 1:1089740/100‑1 (MQ=255)
tGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCa < 1:627404/99‑1 (MQ=255)
tGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAg > 2:1915988/1‑100 (MQ=255)
tGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAg > 1:2017214/1‑100 (MQ=255)
gAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGAGTCGTAGCAAAGCGGAGCAg > 2:267009/1‑99 (MQ=255)
aGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGc > 2:180045/1‑100 (MQ=255)
aGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGc > 2:290613/1‑100 (MQ=255)
gTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCa > 2:980649/1‑100 (MQ=255)
ttGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGTCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCAc < 2:1178184/100‑1 (MQ=255)
ttGAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGc < 2:549646/98‑1 (MQ=255)
gAAATCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTg > 1:2887768/1‑100 (MQ=255)
aaaTCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGa < 1:347730/100‑1 (MQ=255)
aaTCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCCCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGaa > 1:3074155/1‑100 (MQ=255)
tCCCTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAAc < 1:2519136/100‑1 (MQ=255)
cccTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACa < 1:2659004/100‑1 (MQ=255)
ccTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACag < 2:1789461/100‑1 (MQ=255)
ccTTTCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACag < 2:2942344/100‑1 (MQ=255)
ttCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGc < 2:2176900/100‑1 (MQ=255)
ttCCGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGc < 2:686332/100‑1 (MQ=255)
ccGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCg < 1:137090/100‑1 (MQ=255)
cGATACGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGt < 2:1478444/100‑1 (MQ=255)
aCGCTGGAAGAGGTGCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATc > 2:2638813/1‑100 (MQ=255)
cGCTGGAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCg < 1:2539187/100‑1 (MQ=255)
ggAAGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTg < 2:1565776/100‑1 (MQ=255)
aaGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTggg > 1:2437547/1‑100 (MQ=255)
aaGAGGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTggg < 1:587739/100‑1 (MQ=255)
gagGTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTg < 2:1830776/100‑1 (MQ=255)
ggTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGaa < 1:2956713/100‑1 (MQ=255)
ggTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGaa > 1:853513/1‑100 (MQ=255)
ggTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGaa > 2:1096924/1‑100 (MQ=255)
gTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGaaa > 2:3194737/1‑100 (MQ=255)
gTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGaaa < 2:3038400/100‑1 (MQ=255)
gTGCCTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGaaa > 1:1101232/1‑100 (MQ=255)
gCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGAAAcc > 1:2969308/1‑100 (MQ=255)
|
CTACTTACTCACCTGGAGAAAACTATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGAAACC > NC_000913/3249351‑3249545
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
