Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I0 R1
|
121 |
91.8 |
4500463 |
95.1% |
4279940 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,103,886 |
A→G |
32.3% |
Y364H (TAT→CAT) |
cpxA ← |
sensory histidine kinase in two‑component regulatory system with CpxR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,103,886 | 0 | A | G | 32.3%
| 138.3
/ 91.4
| 114 | Y364H (TAT→CAT) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR |
| Reads supporting (aligned to +/- strand): ref base A (42/35); new base G (19/18); total (61/53) |
| Fisher's exact test for biased strand distribution p-value = 8.42e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 114 total aligned reads displayed.
ATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTCAACG > NC_000913/4103791‑4103984
|
aTCTTCCGTGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGc < 2:210151/100‑1 (MQ=255)
tCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCa < 1:1617175/100‑1 (MQ=255)
cTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTTATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCag < 2:1428210/100‑1 (MQ=255)
cTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCag > 2:921925/1‑100 (MQ=255)
cTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCag > 1:616701/1‑100 (MQ=255)
cTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCag > 2:346434/1‑100 (MQ=255)
cTTCCGGGCTAACGCCAAGACCATCGTCGTCCAACGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCGCTTCAACATTCGTACGGGAATGACGc > 2:1480268/1‑98 (MQ=255)
ttCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGAAGCaga > 1:621241/1‑100 (MQ=255)
ccGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGc < 1:970905/100‑1 (MQ=255)
cGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTCTCTACCGCAAAGCCCACTTCAATCTTCGTATTGGAATAACGCAGAGCa < 1:1413304/100‑1 (MQ=255)
gggCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCAt > 1:514741/1‑100 (MQ=255)
gCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTa > 1:1569283/1‑100 (MQ=255)
cTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTAc > 1:1872985/1‑100 (MQ=255)
aaCGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGTAATAACGCAGAGCATTACGa > 2:687156/1‑100 (MQ=255)
aaCGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGa > 2:363761/1‑100 (MQ=255)
aaCGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGa > 2:1491310/1‑100 (MQ=255)
aaCGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGa > 2:2147531/1‑100 (MQ=255)
aaCGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGa > 2:332608/1‑100 (MQ=255)
aaCGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGa > 1:1137875/1‑100 (MQ=255)
cGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAAc < 1:1447561/100‑1 (MQ=255)
gCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGTGAATAACGCAGAGCATTACGAACa > 2:58357/1‑100 (MQ=255)
ccATCGTCGTCCACGGTAATTTTTATACCGGCTTTAGCTACCGTAAAGCCCACTGTAATCGTCGTATGGGAATAACGCAGAGCATTACGAACAATGtttt > 2:1305263/1‑100 (MQ=255)
ccATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGtttt > 1:1423034/1‑100 (MQ=255)
ccATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGtttt > 2:1612674/1‑100 (MQ=255)
aTCGTCGTCCACCGTGATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTcc < 2:2081164/100‑1 (MQ=255)
aTCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTcc < 2:454020/100‑1 (MQ=255)
gtcgtcCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAgc > 1:8155/1‑100 (MQ=255)
gtcgtcCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAgc > 1:1613649/1‑100 (MQ=255)
tcgtcCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAgcg < 2:1518592/100‑1 (MQ=255)
cgtcCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAgcgc > 2:1066931/1‑100 (MQ=255)
gtcCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCa > 1:1166010/1‑100 (MQ=255)
cACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACtt > 2:1763601/1‑100 (MQ=255)
cACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACtt > 1:1132997/1‑100 (MQ=255)
aCCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACATTGTTTTCCAGCGCACttt > 2:1401671/1‑100 (MQ=255)
aCCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACttt > 1:1340449/1‑100 (MQ=255)
ccGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTc > 2:1542656/1‑100 (MQ=255)
gTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCa > 1:1413470/1‑100 (MQ=255)
tAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCa > 1:452433/1‑99 (MQ=255)
tAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAg < 1:921926/100‑1 (MQ=255)
tAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAg < 1:1168164/100‑1 (MQ=255)
tAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAg < 1:1568656/100‑1 (MQ=255)
tAATGGTGATACCGTCTATATATACAGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCAAACGCACTTTCCAg > 2:1445343/1‑100 (MQ=255)
aTGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAgg < 2:511804/99‑1 (MQ=255)
aTGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAggg < 2:785364/100‑1 (MQ=255)
tGGTGATACCGTCTTTATCTACCGCAAAGCCGACTTCTATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGc < 2:1509376/100‑1 (MQ=255)
tGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGc > 2:1389013/1‑100 (MQ=255)
tGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGc < 1:1595864/100‑1 (MQ=255)
ggTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCg < 2:1019992/100‑1 (MQ=255)
ggTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCg > 2:1481326/1‑100 (MQ=255)
ggTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCg < 2:1219021/100‑1 (MQ=255)
gctACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCATCTCACTTTCCAGGGCGTTc < 2:1872973/98‑1 (MQ=255)
gATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTc > 2:1172101/1‑100 (MQ=255)
tACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCgg < 2:1263682/100‑1 (MQ=255)
ccGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGAt < 2:2037109/100‑1 (MQ=255)
cGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGAtt < 1:759514/100‑1 (MQ=255)
gTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTg < 2:570750/100‑1 (MQ=255)
tCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGc < 2:1153435/100‑1 (MQ=255)
cTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGcc > 2:1014866/1‑100 (MQ=255)
cTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGcc > 1:1310449/1‑100 (MQ=255)
tttATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGTATGACGCAGAGCATTACGAACAATGTTTTCCAGCTCACTTTCCAGGGCGTTCGGATTGCCg < 2:730401/100‑1 (MQ=255)
tttATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCg < 1:161642/100‑1 (MQ=255)
tCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACa > 1:1293064/1‑100 (MQ=255)
tCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACa < 2:517181/100‑1 (MQ=255)
aCCGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCg < 1:1918890/100‑1 (MQ=255)
ccGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCgg > 1:1052257/1‑100 (MQ=255)
cGCAAAGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGc > 2:1995142/1‑100 (MQ=255)
gCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGcc < 2:1384112/100‑1 (MQ=255)
aaaGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGTGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCAc < 1:797405/100‑1 (MQ=255)
aaGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACg > 2:1250500/1‑100 (MQ=255)
aGCCCACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACgg < 1:9160/100‑1 (MQ=255)
gCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACgg > 2:1748899/1‑99 (MQ=255)
gCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGc < 2:1646941/100‑1 (MQ=255)
gCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGc > 1:843249/1‑100 (MQ=255)
cccACTTCAATCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCagatcg > 1:2164991/1‑95 (MQ=255)
ccACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGccc > 1:2223852/1‑100 (MQ=255)
ccACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGccc > 1:623902/1‑100 (MQ=255)
ccACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGccc > 1:1957344/1‑100 (MQ=255)
ttCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCa > 1:501368/1‑97 (MQ=255)
tCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCg < 2:2158895/100‑1 (MQ=255)
tCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCg < 1:775209/100‑1 (MQ=255)
cAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCgg < 2:6345/100‑1 (MQ=255)
aaTCTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCggg < 1:1389070/100‑1 (MQ=255)
aaTCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCggg < 1:710477/100‑1 (MQ=255)
cTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAg < 1:363760/100‑1 (MQ=255)
cTTCGTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAg < 1:1491320/100‑1 (MQ=255)
ttCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGt < 2:1005825/100‑1 (MQ=255)
ttCGTATGGGAATAACGCAGACCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCCGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAg < 2:1915132/99‑1 (MQ=255)
cGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTa < 2:1464436/100‑1 (MQ=255)
gTATGGGAATGACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTaa > 1:395347/1‑100 (MQ=255)
tATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAAc < 2:314545/100‑1 (MQ=255)
tATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAAc > 2:1739767/1‑100 (MQ=255)
tGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTg > 2:1415186/1‑100 (MQ=255)
tGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTg > 2:1691056/1‑100 (MQ=255)
gggAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGt < 1:1415196/100‑1 (MQ=255)
gggAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGt > 1:313699/1‑100 (MQ=255)
ggAATGACGCAGAGTATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTc < 2:2081949/100‑1 (MQ=255)
ggAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTc > 1:1646247/1‑100 (MQ=255)
aTAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTCAAc < 1:965240/100‑1 (MQ=255)
tAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTCAACg > 1:1986495/1‑100 (MQ=255)
tAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTCAACg < 1:992766/100‑1 (MQ=255)
|
ATCTTCCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATACCGTCTTTATCTACCGCAAAGCCCACTTCAATCTTCGTATGGGAATAACGCAGAGCATTACGAACAATGTTTTCCAGCGCACTTTCCAGGGCGTTCGGATTGCCGTACAGCGGCCACGGCCCAGGCGGGAAGTTAACTGTCAACG > NC_000913/4103791‑4103984
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
