mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 107,553 | (T)9→8 | 100% | intergenic (+79/‑152) | lpxC → / → secM | UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation |
| RA | 220,849 | (T)5→4 | 100% | coding (80/816 nt) | metQ ← | DL‑methionine transporter subunit |
| RA | 236,569 | C→T | 29.6% | A168V (GCC→GTC) | dnaQ → | DNA polymerase III epsilon subunit |
| RA | 238,795 | T→C | 30.7% | pseudogene (308/357 nt) | yafU ← | pseudogene |
| RA | 252,258 | A→G | 23.1% | N85S (AAT→AGT) | yafN → | antitoxin of the YafO‑YafN toxin‑antitoxin system |
| MC JC | 257,908 | Δ776 bp | 100% | [crl] | [crl] | |
| RA | 282,417 | T→C | 29.8% | L47P (CTG→CCG) | yagE → | 2‑keto‑3‑deoxy gluconate (KDG) aldolase; CP4‑6 prophage |
| RA | 349,717 | T→C | 55.0% | intergenic (+145/‑295) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 379,603 | C→T | 62.0% | intergenic (‑32/+3) | frmA ← / ← frmR | alcohol dehydrogenase class III; glutathione‑dependent formaldehyde dehydrogenase/regulator protein that represses frmRAB operon |
| RA | 380,021 | (G)10→8 | 100% | intergenic (‑140/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| RA | 407,573 | A→G | 30.3% | Y49C (TAC→TGC) | aroM → | AroM family protein |
| RA | 410,479 | A→G | 100% | S112S (TCA→TCG) | mak → | manno(fructo)kinase |
| RA | 426,471 | G→A | 31.3% | R112H (CGT→CAT) | tgt → | tRNA‑guanine transglycosylase |
| RA | 435,946 | G→A | 36.4% | D105N (GAC→AAC) | thiL → | thiamine monophosphate kinase |
| RA | 639,519 | T→C | 19.9% | intergenic (+11/‑234) | ahpC → / → ahpF | alkyl hydroperoxide reductase, C22 subunit/alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding |
| RA | 715,849 | A→G | 29.7% | L146L (TTA→TTG) | ybfP → | lipoprotein |
| RA | 737,994 | A→T | 27.5% | intergenic (+33/‑98) | ybfL → / → ybfD | pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein/H repeat‑associated putative transposase |
| RA | 740,004 | G→A | 67.0% | M166I (ATG→ATA) | phr → | deoxyribodipyrimidine photolyase, FAD‑binding |
| RA | 751,737:1 | (G)6→7 | 100% | coding (433/2448 nt) | ybgQ ← | putative outer membrane protein |
| RA | 848,231 | A→G | 36.5% | intergenic (‑227/+177) | glnH ← / ← dps | glutamine transporter subunit/Fe‑binding and storage protein; stress‑inducible DNA‑binding protein |
| RA | 953,802 | A→G | 100% | V222A (GTA→GCA) | focA ← | formate channel |
| RA | 957,203 | G→A | 26.9% | V148I (GTA→ATA) | ycaP → | UPF0702 family putative inner membrane protein |
| RA | 1,093,359 | C→T | 24.4% | P162S (CCG→TCG) | ycdT → | diguanylate cyclase, membrane‑anchored |
| RA | 1,143,641 | G→A | 100% | H243Y (CAT→TAT) | rne ← | endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| RA | 1,156,112 | T→C | 74.5% | A117A (GCT→GCC) | holB → | DNA polymerase III, delta prime subunit |
| RA | 1,197,853 | T→C | 27.1% | N129D (AAT→GAT) | ymfE ← | e14 prophage; putative inner membrane protein |
| RA | 1,246,073 | C→T | 100% | G435D (GGC→GAC) | treA ← | periplasmic trehalase |
| RA | 1,282,577 | C→T | 24.9% | P905L (CCG→CTG) | narG → | nitrate reductase 1, alpha subunit |
| MC JC | 1,299,499 | Δ1,199 bp | 100% | intergenic (+254/‑485) | ychE → / → oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,311,830 | A→G | 17.0% | intergenic (+22/+18) | tonB → / ← yciA | membrane spanning protein in TonB‑ExbB‑ExbD transport complex/acyl‑CoA esterase |
| RA | 1,311,831 | C→T | 16.6% | intergenic (+23/+17) | tonB → / ← yciA | membrane spanning protein in TonB‑ExbB‑ExbD transport complex/acyl‑CoA esterase |
| RA | 1,370,044 | (T)9→8 | 100% | intergenic (+41/‑172) | pspE → / → ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| RA | 1,407,343 | T→A | 33.4% | G151G (GGA→GGT) | ydaM ← | diguanylate cyclase, csgD regulator |
| RA | 1,489,197 | C→T | 100% | D322D (GAC→GAT) | aldA → | aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,597,272 | T→A | 16.3% | pseudogene (716/3861 nt) | yneO ← | pseudogene, AidA homolog |
| RA | 1,689,817 | C→A | 15.5% | intergenic (+66/‑35) | manA → / → ydgA | mannose‑6‑phosphate isomerase/DUF945 family protein |
| RA | 1,698,281 | A→G | 33.8% | V300V (GTT→GTC) | malI ← | transcriptional repressor of Mal regulon |
| RA | 1,703,251 | A→T | 15.6% | intergenic (+17/+17) | add → / ← ydgJ | adenosine deaminase/putative oxidoreductase |
| RA | 1,703,252 | A→T | 15.6% | intergenic (+18/+16) | add → / ← ydgJ | adenosine deaminase/putative oxidoreductase |
| RA | 1,735,446 | C→T | 24.9% | T23T (ACC→ACT) | sodB → | superoxide dismutase, Fe |
| RA | 1,755,639 | G→A | 100% | intergenic (‑498/‑59) | ydhZ ← / → pykF | uncharacterized protein/pyruvate kinase I |
| RA | 1,868,250 | A→G | 100% | Y448C (TAC→TGC) | yeaG → | protein kinase, endogenous substrate unidentified; autokinase |
| RA | 1,903,571 | A→G | 36.6% | T164A (ACC→GCC) | manY → | mannose‑specific enzyme IIC component of PTS |
| MC JC | 1,978,503 | Δ776 bp | 100% | insB1–insA | insB1, insA | |
| JC JC | 1,979,486 | IS5 (+) +4 bp | 100% | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| RA | 2,018,260 | (A)8→7 | 100% | coding (315/444 nt) | fliJ → | flagellar protein |
| RA | 2,173,363 | Δ2 bp | 100% | intergenic (‑1/+1) | gatC ← / ← gatC | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC/pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| RA | 2,250,702 | T→C | 63.8% | L329P (CTG→CCG) | yeiH → | UPF0324 family inner membrane protein |
| RA | 2,304,221 | C→T | 68.1% | A106V (GCC→GTC) | eco → | ecotin, a serine protease inhibitor |
| RA | 2,353,249 | T→C | 20.5% | H201H (CAT→CAC) | glpA → | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, large FAD/NAD(P)‑binding subunit |
| RA | 2,470,410 | (T)7→6 | 100% | coding (1280/1332 nt) | gtrS → | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage |
| RA | 2,496,582 | T→C | 30.7% | intergenic (+17/‑339) | lpxP → / → ypdK | palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase/inner membrane protein |
| RA | 2,506,492 | C→T | 22.9% | A47A (GCG→GCA) | ypdF ← | Xaa‑Pro aminopeptidase |
| RA | 2,516,689 | T→C | 100% | T382A (ACG→GCG) | yfeA ← | putative diguanylate cyclase |
| RA | 2,553,210 | A→G | 19.7% | K287E (AAA→GAA) | amiA → | N‑acetylmuramoyl‑l‑alanine amidase I |
| RA | 2,652,855:1 | (G)6→7 | 100% | coding (362/846 nt) | sseA → | 3‑mercaptopyruvate sulfurtransferase |
| RA | 2,674,851 | T→C | 26.5% | H304R (CAT→CGT) | yphC ← | putative Zn‑dependent NAD(P)‑binding oxidoreductase |
| RA | 2,731,312 | G→A | 100% | intergenic (‑155/+288) | rrsG ← / ← clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| RA | 2,751,278 | G→A | 32.5% | V150M (GTG→ATG) | nadK → | NAD kinase |
| RA | 2,790,586 | T→C | 64.9% | L202P (CTG→CCG) | lhgO → | L‑2‑hydroxyglutarate oxidase |
| RA | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| RA | 2,823,838 | C→A | 15.6% | intergenic (‑69/+11) | recA ← / ← pncC | DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor/nicotinamide‑nucleotide amidohydrolase; NMN amidohydrolase |
| RA | 2,823,839 | T→G | 15.4% | intergenic (‑70/+10) | recA ← / ← pncC | DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor/nicotinamide‑nucleotide amidohydrolase; NMN amidohydrolase |
| RA | 2,856,887 | C→T | 70.1% | intergenic (‑81/‑206) | ygbA ← / → mutS | uncharacterized protein/methyl‑directed mismatch repair protein |
| RA | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| RA | 2,889,702 | A→G | 32.4% | V133A (GTG→GCG) | cysI ← | sulfite reductase, beta subunit, NAD(P)‑binding, heme‑binding |
| RA | 2,967,887 | G→A | 66.8% | A183V (GCC→GTC) | ptsP ← | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| RA | 3,007,187 | A→T | 68.5% | D309V (GAC→GTC) | ygeW → | putative carbamoyltransferase |
| RA | 3,008,075 | A→G | 100% | D189G (GAC→GGC) | ygeX → | 2,3‑diaminopropionate ammonia lyase, PLP‑dependent |
| RA | 3,028,955 | C→T | 28.8% | V20I (GTA→ATA) | ygfS ← | putative 4Fe‑4S ferredoxin‑type oxidoreductase subunit |
| RA | 3,182,712 | G→A | 32.1% | A55T (GCC→ACC) | zupT → | zinc transporter |
| RA | 3,194,516 | A→G | 100% | K551K (AAA→AAG) | yqiK → | PHB family membrane protein, function unknown |
| RA | 3,249,628 | G→A | 71.8% | G85D (GGC→GAC) | yqjD → | membrane‑anchored ribosome‑binding protein |
| RA | 3,298,809 | A→G | 59.5% | V13A (GTG→GCG) | yraR ← | putative nucleoside‑diphosphate‑sugar epimerase |
| RA | 3,338,374 | T→C | 36.9% | N30D (AAC→GAC) | mlaD ← | OM lipid asymmetry maintenance protein; membrane‑anchored ABC family periplasmic binding protein |
| RA | 3,352,673 | T→C | 100% | E118G (GAA→GGA) | arcB ← | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| RA | 3,379,266:1 | (C)7→8 | 100% | coding (732/1128 nt) | zapE ← | divisome ATPase |
| RA | 3,396,689 | G→A | 33.5% | S369S (AGC→AGT) | rng ← | ribonuclease G |
| RA | 3,411,299 | T→C | 100% | V10A (GTA→GCA) | fis → | global DNA‑binding transcriptional dual regulator |
| RA | 3,420,599 | C→T | 31.0% | Q156* (CAG→TAG) | yhdX → | putative amino acid ABC transporter permease |
| RA | 3,512,561 | Δ1 bp | 31.1% | intergenic (‑217/+73) | yhfZ ← / ← trpS | putative DNA‑binding transcriptional regulator/tryptophanyl‑tRNA synthetase |
| RA | 3,520,513 | T→C | 65.3% | D64G (GAT→GGT) | hofQ ← | DNA catabolic putative fimbrial transporter |
| RA | 3,542,093 | G→A | 31.4% | V563M (GTG→ATG) | feoB → | ferrous iron transporter protein B and GTP‑binding protein; membrane protein |
| RA | 3,560,455:1 | +G | 100% | intergenic (‑2/+1) | glpR ← / ← glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| MC JC | 3,582,206 | Δ1,222 bp | 100% | IS1‑mediated | [yhhZ]–yrhA | [yhhZ], yrhA |
| RA | 3,601,076 | T→C | 29.1% | A337A (GCA→GCG) | ftsX ← | putative ABC transporter permease |
| RA | 3,646,678 | G→A | 57.3% | G127D (GGC→GAC) | gor → | glutathione oxidoreductase |
| RA | 3,648,144 | (T)7→6 | 100% | intergenic (‑356/‑384) | dinQ ← / → arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| RA | 3,706,048 | G→T | 17.9% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| RA | 3,728,118 | (C)8→7 | 100% | coding (1254/1455 nt) | xylB ← | xylulokinase |
| MC JC | 3,815,859 | Δ82 bp | 100% | [rph]–[rph] | [rph], [rph] | |
| RA | 3,832,188 | A→T | 15.0% | intergenic (+22/+31) | yicH → / ← yicI | putative inner membrane‑anchored periplasmic AsmA family protein/putative alpha‑glucosidase |
| RA | 3,832,191 | C→G | 15.2% | intergenic (+25/+28) | yicH → / ← yicI | putative inner membrane‑anchored periplasmic AsmA family protein/putative alpha‑glucosidase |
| RA | 3,832,194 | A→T | 15.4% | intergenic (+28/+25) | yicH → / ← yicI | putative inner membrane‑anchored periplasmic AsmA family protein/putative alpha‑glucosidase |
| RA | 3,906,015 | G→A | 41.3% | Q185* (CAA→TAA) | bglG ← | transcriptional antiterminator of the bgl operon |
| RA | 3,946,246 | G→A | 23.0% | noncoding (2543/2904 nt) | rrlC → | 23S ribosomal RNA of rrnC operon |
| RA | 3,951,559:1 | +A | 55.6% | pseudogene (18/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| RA | 3,952,380 | G→A | 35.6% | L60L (CTG→CTA) | ilvM → | acetolactate synthase 2 small subunit |
| RA | 3,952,569 | C→T | 36.6% | A29V (GCG→GTG) | ilvE → | branched‑chain amino acid aminotransferase |
| RA | 3,959,515 | T→A | 15.2% | intergenic (+70/+17) | ilvC → / ← ppiC | ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C) |
| RA | 4,051,259 | G→T | 15.4% | intergenic (‑494/‑88) | yihA ← / → yihI | cell division GTP‑binding protein/activator of Der GTPase |
| RA | 4,103,886 | A→G | 32.3% | Y364H (TAT→CAT) | cpxA ← | sensory histidine kinase in two‑component regulatory system with CpxR |
| RA | 4,122,382 | A→G | 37.2% | *320R (TGA→CGA) | ftsN ← | essential cell division protein |
| RA | 4,128,197 | T→C | 68.8% | T67A (ACC→GCC) | metJ ← | transcriptional repressor, S‑adenosylmethionine‑binding |
| RA | 4,128,262 | T→C | 35.3% | Q45R (CAG→CGG) | metJ ← | transcriptional repressor, S‑adenosylmethionine‑binding |
| RA | 4,214,649 | A→T | 74.1% | I124F (ATC→TTC) | metA → | homoserine O‑transsuccinylase |
| RA | 4,214,964 | A→G | 30.9% | I229V (ATT→GTT) | metA → | homoserine O‑transsuccinylase |
| RA | 4,243,370 | C→T | 55.5% | L49L (CTG→CTA) | malG ← | maltose transporter subunit |
| RA | 4,295,744 | G→A | 69.3% | A422T (GCT→ACT) | gltP → | glutamate/aspartate:proton symporter |
| RA | 4,296,060 | C→T | 100% | intergenic (+266/+376) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| RA | 4,296,381:1 | +GC | 100% | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| RA | 4,337,024 | G→A | 100% | S3L (TCG→TTG) | adiC ← | arginine:agmatine antiporter |
| JC | 4,370,608 | Δ4 bp | 38.8% | intergenic (‑196/‑77) | yjeH ← / → groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| RA | 4,370,616 | A→G | 27.9% | intergenic (‑204/‑72) | yjeH ← / → groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| RA | 4,397,557 | G→T | 100% | G49V (GGT→GTT) | mutL → | methyl‑directed mismatch repair protein |
| RA | 4,410,053 | (T)9→8 | 100% | intergenic (+47/‑80) | rlmB → / → yjfI | 23S rRNA mG2251 2'‑O‑ribose methyltransferase, SAM‑dependent/DUF2170 family protein |
| RA | 4,416,948 | A→G | 33.6% | intergenic (‑178/‑4) | bsmA ← / → yjfP | bioflm peroxide resistance protein/acyl CoA esterase |
| RA | 4,472,190 | G→C | 28.9% | A69G (GCC→GGC) | pyrB ← | aspartate carbamoyltransferase, catalytic subunit |
| RA | 4,494,883:1 | (A)7→8 | 100% | coding (261/564 nt) | idnK → | D‑gluconate kinase, thermosensitive |
| RA | 4,573,528 | A→G | 100% | pseudogene (1115/1503 nt) | yjiT → | pseudogene |
| RA | 4,638,193:1 | (C)6→7 | 100% | coding (16/1353 nt) | creD → | inner membrane protein |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3423822–3424234 | 3424591–3424238 | 5–770 | 49 [48] | [46] 49 | [rrlD] | [rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 15803 | NA (NA) | 6 (0.080) | 5/170 | NT | NA | noncoding (417/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 15823 | NA (NA) | noncoding (437/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | 15960 = | NA (NA) | 6 (0.080) | 6/166 | NT | NA | noncoding (574/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | 15980 = | NA (NA) | noncoding (594/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | 19879 = | NA (NA) | 4 (0.050) | 3/172 | NT | NA | noncoding (685/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 19905 = | NA (NA) | noncoding (659/768 nt) | IS1 | repeat region | |||||
| * | ? | NC_000913 | = 25765 | NA (NA) | 3 (0.040) | 3/164 | NT | NA | noncoding (56/86 nt) | REP2 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP2 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 2835148 | NA (NA) | noncoding (82/82 nt) | REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 39151 = | NA (NA) | 4 (0.050) | 4/164 | NT | NA | noncoding (1/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 39181 = | NA (NA) | noncoding (31/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 111434 = | NA (NA) | 5 (0.060) | 4/172 | NT | NA | noncoding (5/200 nt) | RIP8 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | RIP8 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site |
| ? | NC_000913 | 111464 = | NA (NA) | noncoding (35/200 nt) | RIP8 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | RIP8 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | |||||
| * | ? | NC_000913 | = 224027 | NA (NA) | 5 (0.070) | 3/166 | NT | NA | noncoding (257/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 224038 | NA (NA) | noncoding (268/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 224059 = | NA (NA) | 19 (0.250) | 7/164 | NT | NA | noncoding (289/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 224082 = | NA (NA) | noncoding (312/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 224380 = | NA (NA) | 7 (0.090) | 4/170 | NT | NA | noncoding (610/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 224400 = | NA (NA) | noncoding (630/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 225078 = | NA (NA) | 28 (0.370) | 10/164 | NT | NA | noncoding (1308/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 225100 = | NA (NA) | noncoding (1330/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 225084 | NA (NA) | 15 (0.200) | 7/164 | NT | NA | noncoding (1314/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 225092 | NA (NA) | noncoding (1322/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 225154 = | NA (NA) | 19 (0.250) | 12/168 | NT | NA | noncoding (1384/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 225176 = | NA (NA) | noncoding (1406/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 225277 = | NA (NA) | 11 (0.140) | 7/168 | NT | NA | noncoding (1507/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 225299 = | NA (NA) | noncoding (1529/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 225281 | NA (NA) | 31 (0.400) | 11/168 | NT | NA | noncoding (1511/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 225293 | NA (NA) | noncoding (1523/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 225915 | NA (NA) | 7 (0.090) | 5/162 | NT | NA | noncoding (157/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 225926 | NA (NA) | noncoding (168/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 225998 | NA (NA) | 17 (0.220) | 12/170 | NT | NA | noncoding (240/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 226015 | NA (NA) | noncoding (257/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 226704 = | NA (NA) | 4 (0.050) | 3/170 | NT | NA | noncoding (946/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 226730 = | NA (NA) | noncoding (972/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 226815 = | NA (NA) | 5 (0.060) | 4/172 | NT | NA | noncoding (1057/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 226840 = | NA (NA) | noncoding (1082/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 227242 = | NA (NA) | 10 (0.130) | 6/166 | NT | NA | noncoding (1484/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 227264 = | NA (NA) | noncoding (1506/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 227444 | NA (NA) | 10 (0.130) | 6/168 | NT | NA | noncoding (1686/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 227459 | NA (NA) | noncoding (1701/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 228016 = | NA (NA) | 24 (0.320) | 10/164 | NT | NA | noncoding (2258/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 228041 = | NA (NA) | noncoding (2283/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 228022 | NA (NA) | 16 (0.210) | 6/164 | NT | NA | noncoding (2264/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 228033 | NA (NA) | noncoding (2275/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 228108 | NA (NA) | 12 (0.150) | 6/170 | NT | NA | noncoding (2350/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 228124 | NA (NA) | noncoding (2366/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 228224 | NA (NA) | 14 (0.180) | 9/166 | NT | NA | noncoding (2466/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 228241 | NA (NA) | noncoding (2483/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 270851 | NA (NA) | 14 (0.180) | 8/166 | NT | NA | noncoding (311/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 270857 | NA (NA) | noncoding (317/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | 271017 = | NA (NA) | 6 (0.080) | 5/164 | NT | NA | noncoding (477/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | 271039 = | NA (NA) | noncoding (499/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | 274038 = | NA (NA) | 3 (0.040) | 3/166 | NT | NA | noncoding (1112/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274083 = | NA (NA) | noncoding (1067/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274103 = | NA (NA) | 4 (0.050) | 4/170 | NT | NA | noncoding (1047/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274121 = | NA (NA) | noncoding (1029/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274334 | NA (NA) | 10 (0.130) | 6/166 | NT | NA | noncoding (816/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274338 | NA (NA) | noncoding (812/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274347 = | NA (NA) | 5 (0.070) | 4/164 | NT | NA | noncoding (803/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274410 = | NA (NA) | noncoding (740/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274525 = | NA (NA) | 8 (0.110) | 6/164 | NT | NA | noncoding (625/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274559 = | NA (NA) | noncoding (591/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274531 | NA (NA) | 4 (0.050) | 3/164 | NT | NA | noncoding (619/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274551 | NA (NA) | noncoding (599/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274653 | NA (NA) | 20 (0.260) | 9/170 | NT | NA | noncoding (497/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274663 | NA (NA) | noncoding (487/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274695 | NA (NA) | 6 (0.080) | 4/170 | NT | NA | noncoding (455/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274727 | NA (NA) | noncoding (423/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274965 = | NA (NA) | 12 (0.150) | 8/172 | NT | NA | noncoding (185/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274991 = | NA (NA) | noncoding (159/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 275007 | NA (NA) | 28 (0.360) | 11/172 | NT | NA | noncoding (143/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 275025 | NA (NA) | noncoding (125/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 279790 | NA (NA) | 3 (0.040) | 3/172 | NT | NA | noncoding (141/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 279806 | NA (NA) | noncoding (125/768 nt) | IS1 | repeat region | |||||
| * | ? | NC_000913 | = 315572 | NA (NA) | 8 (0.110) | 3/158 | NT | NA | noncoding (344/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | = 315588 | NA (NA) | noncoding (360/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 315642 = | NA (NA) | 14 (0.180) | 9/168 | NT | NA | noncoding (414/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 315671 = | NA (NA) | noncoding (443/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | = 315646 | NA (NA) | 11 (0.140) | 9/168 | NT | NA | noncoding (418/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | = 315665 | NA (NA) | noncoding (437/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | = 315646 | NA (NA) | 3 (0.040) | 3/168 | NT | NA | noncoding (418/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | = 315687 | NA (NA) | noncoding (459/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 315892 = | NA (NA) | 5 (0.060) | 5/172 | NT | NA | noncoding (664/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 315923 = | NA (NA) | noncoding (695/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 315913 = | NA (NA) | 3 (0.040) | 3/170 | NT | NA | noncoding (685/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 315930 = | NA (NA) | noncoding (702/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 316193 = | NA (NA) | 5 (0.070) | 4/160 | NT | NA | noncoding (965/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 316230 = | NA (NA) | noncoding (1002/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | = 316201 | NA (NA) | 15 (0.200) | 9/160 | NT | NA | noncoding (973/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | = 316220 | NA (NA) | noncoding (992/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 349605 = | NA (NA) | 9 (0.120) | 5/164 | NT | NA | noncoding (1/365 nt) | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences |
| ? | NC_000913 | 349637 = | NA (NA) | noncoding (33/365 nt) | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences | REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences | |||||
| * | ? | NC_000913 | 361887 = | NA (NA) | 4 (0.050) | 3/164 | NT | NA | noncoding (5/34 nt) | REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 361917 = | NA (NA) | intergenic (‑57/+9) | lacA/lacY | thiogalactoside acetyltransferase/lactose permease | |||||
| * | ? | NC_000913 | 377335 = | NA (NA) | 7 (0.090) | 3/164 | NT | NA | noncoding (1/187 nt) | REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences |
| ? | NC_000913 | 377368 = | NA (NA) | noncoding (34/187 nt) | REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences | |||||
| * | ? | NC_000913 | 381663 = | NA (NA) | 9 (0.120) | 7/164 | NT | NA | noncoding (404/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 381703 = | NA (NA) | noncoding (444/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381669 | NA (NA) | 21 (0.280) | 11/164 | NT | NA | noncoding (410/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381695 | NA (NA) | noncoding (436/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381837 | NA (NA) | 7 (0.090) | 5/166 | NT | NA | noncoding (578/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381852 | NA (NA) | noncoding (593/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381910 | NA (NA) | 25 (0.330) | 6/166 | NT | NA | noncoding (651/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381923 | NA (NA) | noncoding (664/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 382242 | NA (NA) | 4 (0.050) | 3/166 | NT | NA | noncoding (983/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 382260 | NA (NA) | noncoding (1001/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 501448 = | NA (NA) | 4 (0.050) | 4/164 | NT | NA | noncoding (5/84 nt) | REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 501478 = | NA (NA) | noncoding (35/84 nt) | REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 526259 = | NA (NA) | 6 (0.080) | 4/168 | NT | 100% | coding (2999/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 526275 = | 0 (0.000) | coding (3015/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 580768 | 59 (0.720) | 11 (0.160) | 6/146 | NT | 17.3% | intergenic (‑323/‑66) | ylcI/nohD | DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein |
| ? | NC_000913 | = 580793 | 57 (0.850) | intergenic (‑348/‑41) | ylcI/nohD | DUF3950 family protein, DLP12 prophage/DLP12 prophage; DNA packaging protein | |||||
| * | ? | NC_000913 | = 707978 | NA (NA) | 6 (0.090) +GGATTGTTTGCTGTTTCT |
4/142 | NT | NA | intergenic (+221/‑356) | glnS/chiP | glutamyl‑tRNA synthetase/chitoporin, uptake of chitosugars |
| ? | NC_000913 | 4137788 = | NA (NA) | intergenic (‑131/+144) | yijF/gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase | |||||
| * | ? | NC_000913 | = 730045 | NA (NA) | 8 (0.100) | 4/168 | NT | NA | coding (463/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 730067 | NA (NA) | coding (485/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 732470 = | 48 (0.590) | 10 (0.130) | 5/168 | NT | 19.4% | coding (2888/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 732512 = | 38 (0.490) | coding (2930/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 792267 | NA (NA) | 5 (0.070) | 5/164 | NT | NA | noncoding (4/34 nt) | REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 792297 | NA (NA) | noncoding (34/34 nt) | REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 825054 | 50 (0.610) | 12 (0.160) | 9/164 | NT | 18.6% | coding (1055/1107 nt) | ybhR | putative ABC transporter permease |
| ? | NC_000913 | = 825067 | 59 (0.790) | coding (1042/1107 nt) | ybhR | putative ABC transporter permease | |||||
| * | ? | NC_000913 | 1167402 = | NA (NA) | 4 (0.050) | 4/162 | NT | NA | noncoding (1/30 nt) | REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 1167432 = | NA (NA) | intergenic (+43/‑167) | ndh/ycfJ | respiratory NADH dehydrogenase 2/cupric reductase/uncharacterized protein | |||||
| * | ? | NC_000913 | = 1190585 | NA (NA) | 4 (0.050) | 3/166 | NT | NA | noncoding (6/23 nt) | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 1190596 | NA (NA) | noncoding (17/23 nt) | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | 1357754 = | NA (NA) | 8 (0.110) | 3/160 | NT | NA | intergenic (‑86/+48) | ymjA/puuP | DUF2543 family protein/putrescine importer |
| ? | NC_000913 | 1357793 = | NA (NA) | noncoding (24/30 nt) | REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 1418975 | 75 (0.920) | 13 (0.180) | 8/158 | NT | 15.7% | coding (305/489 nt) | sieB | phage superinfection exclusion protein, Rac prophage |
| ? | NC_000913 | = 1418981 | 73 (1.010) | coding (311/489 nt) | sieB | phage superinfection exclusion protein, Rac prophage | |||||
| * | ? | NC_000913 | = 1432761 | NA (NA) | 8 (0.100) | 4/170 | NT | NA | coding (351/576 nt) | tfaR | Rac prophage; putative tail fiber assembly protein |
| ? | NC_000913 | = 1432785 | NA (NA) | coding (375/576 nt) | tfaR | Rac prophage; putative tail fiber assembly protein | |||||
| * | ? | NC_000913 | = 1470201 | NA (NA) | 4 (0.050) | 3/164 | NT | NA | noncoding (906/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 1470210 | NA (NA) | noncoding (915/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | = 1592638 | NA (NA) | 4 (0.060) | 4/156 | NT | NA | noncoding (8/25 nt) | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 1592647 | NA (NA) | noncoding (17/25 nt) | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 1624887 | 50 (0.610) | 11 (0.150) | 9/162 | NT | 18.3% | coding (115/519 nt) | ydeJ | inactive PncC family protein |
| ? | NC_000913 | = 1624897 | 53 (0.710) | coding (125/519 nt) | ydeJ | inactive PncC family protein | |||||
| * | ? | NC_000913 | = 1811350 | 45 (0.550) | 8 (0.110) | 7/166 | NT | 15.5% | coding (417/1392 nt) | ydjN | putative transporter |
| ? | NC_000913 | = 1811371 | 45 (0.590) | coding (438/1392 nt) | ydjN | putative transporter | |||||
| * | ? | NC_000913 | 1843724 = | NA (NA) | 7 (0.090) | 6/164 | NT | NA | noncoding (1/93 nt) | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 1843750 = | NA (NA) | noncoding (27/93 nt) | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 1843797 | NA (NA) | 3 (0.040) | 3/166 | NT | NA | noncoding (74/93 nt) | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 1843810 | NA (NA) | noncoding (87/93 nt) | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 1852545 = | NA (NA) | 4 (0.060) | 4/156 | NT | NA | intergenic (+17/+76) | pncA/ydjE | nicotinamidase/pyrazinamidase/putative MFS sugar transporter, membrane protein |
| ? | NC_000913 | 1852562 = | NA (NA) | noncoding (1/36 nt) | REP132 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP132 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 1852547 | NA (NA) | 7 (0.100) | 6/156 | NT | NA | intergenic (+19/+74) | pncA/ydjE | nicotinamidase/pyrazinamidase/putative MFS sugar transporter, membrane protein |
| ? | NC_000913 | = 1852558 | NA (NA) | intergenic (+30/+63) | pncA/ydjE | nicotinamidase/pyrazinamidase/putative MFS sugar transporter, membrane protein | |||||
| * | ? | NC_000913 | 1929923 = | NA (NA) | 4 (0.050) | 4/172 | NT | NA | noncoding (1/84 nt) | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 1929955 = | NA (NA) | noncoding (33/84 nt) | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 1929976 | NA (NA) | 3 (0.040) | 3/166 | NT | NA | noncoding (54/84 nt) | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 1930006 | NA (NA) | noncoding (84/84 nt) | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 2066832 | 0 (0.000) | 11 (0.150) | 4/160 | NT | 100% | noncoding (522/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2066857 | NA (NA) | noncoding (497/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 2133432 = | NA (NA) | 8 (0.110) | 6/164 | NT | NA | noncoding (1/34 nt) | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 2133462 = | NA (NA) | noncoding (31/34 nt) | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | 2139702 = | NA (NA) | 7 (0.090) | 6/164 | NT | NA | noncoding (1/37 nt) | REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 2139735 = | NA (NA) | noncoding (34/37 nt) | REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | 2232736 = | NA (NA) | 4 (0.050) | 3/166 | NT | NA | noncoding (1/34 nt) | REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 2232766 = | NA (NA) | noncoding (31/34 nt) | REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 2304841 | 48 (0.590) | 14 (0.190) | 7/164 | NT | 24.1% | noncoding (425/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | NC_000913 | = 2304922 | NA (NA) | noncoding (506/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
| * | ? | NC_000913 | = 2430980 | NA (NA) | 8 (0.110) | 6/164 | NT | NA | noncoding (52/84 nt) | REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 2431012 | NA (NA) | noncoding (84/84 nt) | REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 2440342 | NA (NA) | 3 (0.040) | 3/166 | NT | NA | intergenic (‑222/+43) | yfcJ/fabB | putative arabinose efflux transporter/3‑oxoacyl‑[acyl‑carrier‑protein] synthase I |
| ? | NC_000913 | = 2440374 | NA (NA) | noncoding (32/36 nt) | REP170 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP170 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | 2568139 = | NA (NA) | 8 (0.110) | 9/164 | NT | NA | noncoding (1/183 nt) | REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences |
| ? | NC_000913 | 2568169 = | NA (NA) | noncoding (31/183 nt) | REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences | |||||
| * | ? | NC_000913 | 2617939 = | NA (NA) | 6 (0.080) | 4/164 | NT | NA | intergenic (+2/+136) | yfgD/hda | putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation |
| ? | NC_000913 | 2617967 = | NA (NA) | intergenic (+30/+108) | yfgD/hda | putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation | |||||
| * | ? | NC_000913 | 2662308 = | NA (NA) | 3 (0.040) +GCCGTT |
3/166 | NT | NA | intergenic (‑177/+275) | iscR/trmJ | isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress‑ and iron starvation‑inducible; autorepressor/tRNA mC32,mU32 2'‑O‑methyltransferase, SAM‑dependent |
| ? | NC_000913 | 2662360 = | NA (NA) | noncoding (52/266 nt) | REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences | REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences | |||||
| * | ? | NC_000913 | 2726200 = | NA (NA) | 38 (0.500) | 9/166 | NT | NA | intergenic (‑12/+81) | rrfG/rrlG | 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon |
| ? | NC_000913 | 2726224 = | NA (NA) | intergenic (‑36/+57) | rrfG/rrlG | 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | 2727891 = | NA (NA) | 24 (0.320) | 7/166 | NT | NA | noncoding (1294/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | NC_000913 | 2727910 = | NA (NA) | noncoding (1275/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | 2728214 = | NA (NA) | 17 (0.220) | 8/170 | NT | NA | noncoding (971/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | NC_000913 | 2728240 = | NA (NA) | noncoding (945/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | 2729453 = | NA (NA) | 10 (0.140) | 10/158 | NT | 79.0% | intergenic (‑9/+163) | gltW/rrsG | tRNA‑Glu/16S ribosomal RNA of rrnG operon |
| ? | NC_000913 | 2729475 = | 3 (0.040) | intergenic (‑31/+141) | gltW/rrsG | tRNA‑Glu/16S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | = 2794135 | NA (NA) | 5 (0.060) | 4/168 | NT | NA | noncoding (108/136 nt) | REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913 | = 2794163 | NA (NA) | noncoding (136/136 nt) | REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
| * | ? | NC_000913 | = 3012585 | NA (NA) | 8 (0.110) | 6/166 | NT | NA | noncoding (185/204 nt) | RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3012599 | NA (NA) | noncoding (199/204 nt) | RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | |||||
| * | ? | NC_000913 | 3139655 = | NA (NA) | 9 (0.120) | 5/164 | NT | NA | noncoding (35/83 nt) | REP221 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP221 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 4218440 = | NA (NA) | noncoding (5/132 nt) | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
| * | ? | NC_000913 | 3163644 = | NA (NA) | 5 (0.070) | 3/160 | NT | NA | noncoding (1/30 nt) | REP223 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP223 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 3163674 = | NA (NA) | intergenic (‑193/+41) | plsC/parC | 1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/DNA topoisomerase IV, subunit A | |||||
| * | ? | NC_000913 | 3214896 = | NA (NA) | 6 (0.080) | 4/168 | NT | NA | noncoding (5/33 nt) | REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 3214925 = | NA (NA) | intergenic (+37/+42) | rpoD/mug | RNA polymerase, sigma 70 (sigma D) factor/G/U mismatch‑specific DNA glycosylase; xanthine DNA glycosylase | |||||
| * | ? | NC_000913 | 3255217 = | NA (NA) | 8 (0.110) | 6/164 | NT | NA | noncoding (1/103 nt) | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 3255247 = | NA (NA) | noncoding (31/103 nt) | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 3269713 = | NA (NA) | 7 (0.090) +TT |
6/174 | NT | NA | intergenic (+111/+912) | yhaC/garK | pentapetide repeats‑related protein/glycerate kinase I |
| ? | NC_000913 | = 4137924 | NA (NA) | intergenic (‑267/+8) | yijF/gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase | |||||
| * | ? | NC_000913 | = 3313290 | NA (NA) | 7 (0.090) | 5/164 | NT | NA | noncoding (39/77 nt) | REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 3313328 | NA (NA) | noncoding (77/77 nt) | REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 3336878 = | NA (NA) | 6 (0.080) | 6/168 | NT | NA | intergenic (‑75/+85) | ibaG/mlaB | acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component |
| ? | NC_000913 | 3336905 = | NA (NA) | intergenic (‑102/+58) | ibaG/mlaB | acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component | |||||
| * | ? | NC_000913 | = 3379840 | 60 (0.740) | 11 (0.140) | 6/168 | NT | 15.6% | coding (158/1128 nt) | zapE | divisome ATPase |
| ? | NC_000913 | = 3379865 | 62 (0.810) | coding (133/1128 nt) | zapE | divisome ATPase | |||||
| * | ? | NC_000913 | = 3423822 | 0 (0.000) | 20 (0.260) | 6/166 | NT | 100% | intergenic (‑35/+58) | rrfD/rrlD | 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 4040506 = | NA (NA) | intergenic (+83/‑11) | rrlA/rrfA | 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon | |||||
| * | ? | NC_000913 | 3428910 = | 10 (0.120) | 11 (0.140) | 9/168 | NT | 53.8% | intergenic (‑148/‑326) | rrsD/yrdA | 16S ribosomal RNA of rrnD operon/bacterial transferase hexapeptide domain protein |
| ? | NC_000913 | = 4207974 | NA (NA) | intergenic (‑442/‑173) | purH/rrsE | IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon | |||||
| * | ? | NC_000913 | 3470277 = | NA (NA) | 7 (0.090) | 5/164 | NT | NA | coding (1053/1185 nt) | tufA | translation elongation factor EF‑Tu 1 |
| ? | NC_000913 | 3470311 = | NA (NA) | coding (1019/1185 nt) | tufA | translation elongation factor EF‑Tu 1 | |||||
| * | ? | NC_000913 | = 3488981 | NA (NA) | 7 (0.090) | 9/166 | NT | NA | coding (1200/1221 nt) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| ? | NC_000913 | = 3488989 | NA (NA) | coding (1192/1221 nt) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase | |||||
| * | ? | NC_000913 | = 3525557 | NA (NA) | 4 (0.050) | 5/164 | NT | NA | noncoding (80/98 nt) | RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3525568 | NA (NA) | noncoding (91/98 nt) | RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
| * | ? | NC_000913 | = 3546221 | NA (NA) | 4 (0.050) | 4/166 | NT | NA | intergenic (+22/‑338) | nfuA/gntT | Fe/S biogenesis protein, putative scaffold/chaperone protein/gluconate transporter, high‑affinity GNT I system |
| ? | NC_000913 | = 3546253 | NA (NA) | noncoding (32/36 nt) | REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 3620116 | NA (NA) | 7 (0.090) | 3/166 | NT | 100% | coding (925/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3620152 | 0 (0.000) | coding (961/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 3620614 | NA (NA) | 14 (0.180) | 6/166 | NT | 100% | coding (1423/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3620635 | 0 (0.000) | coding (1444/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3621530 = | NA (NA) | 3 (0.040) | 3/170 | NT | 100% | coding (2339/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3621558 = | 0 (0.000) | coding (2367/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3622466 = | NA (NA) | 15 (0.190) | 7/170 | NT | 100% | coding (3275/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3622497 = | 0 (0.000) | coding (3306/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 3622548 | NA (NA) | 4 (0.050) | 3/168 | NT | 21.0% | coding (3357/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3622579 | 16 (0.200) | coding (3388/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 3680409 | NA (NA) | 3 (0.040) | 3/160 | NT | NA | noncoding (43/76 nt) | REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 3680441 | NA (NA) | noncoding (75/76 nt) | REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 3765531 = | NA (NA) | 9 (0.120) | 3/168 | NT | 100% | coding (3349/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3765547 = | 0 (0.000) | coding (3365/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3910443 = | NA (NA) | 3 (0.040) | 3/168 | NT | NA | noncoding (1/35 nt) | REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 3910474 = | NA (NA) | noncoding (32/35 nt) | REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 4148478 | NA (NA) | 8 (0.110) | 5/164 | NT | NA | noncoding (49/82 nt) | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 4148511 | NA (NA) | noncoding (82/82 nt) | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 4171803 | 71 (0.870) | 29 (0.360) | 9/174 | NT | 29.5% | intergenic (+47/‑254) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | NC_000913 | = 4213162 | NA (NA) | intergenic (+3/‑72) | rrfE/yjaA | 5S ribosomal RNA of rrnE operon/stress‑induced protein | |||||
| * | ? | NC_000913 | 4229380 = | NA (NA) | 9 (0.120) | 4/164 | NT | NA | noncoding (5/70 nt) | REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 4229413 = | NA (NA) | noncoding (38/70 nt) | REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 4235504 | NA (NA) | 5 (0.070) | 5/166 | NT | NA | intergenic (+97/‑402) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein |
| ? | NC_000913 | = 4235530 | NA (NA) | intergenic (+123/‑376) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein | |||||
| * | ? | NC_000913 | 4323250 = | NA (NA) | 5 (0.070) | 4/164 | NT | NA | noncoding (5/87 nt) | REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 4323280 = | NA (NA) | noncoding (35/87 nt) | REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 4326250 | NA (NA) | 6 (0.080) | 4/164 | NT | NA | noncoding (449/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | NC_000913 | = 4326380 | NA (NA) | noncoding (579/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
| * | ? | NC_000913 | = 4326350 | NA (NA) | 6 (0.080) | 5/164 | NT | NA | noncoding (549/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | NC_000913 | = 4326380 | NA (NA) | noncoding (579/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
| * | ? | NC_000913 | = 4415961 | NA (NA) | 3 (0.040) | 3/166 | NT | NA | noncoding (4/34 nt) | REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 4415991 | NA (NA) | noncoding (34/34 nt) | REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | 4450948 = | NA (NA) | 4 (0.050) | 4/164 | NT | NA | noncoding (5/85 nt) | REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 4450978 = | NA (NA) | noncoding (35/85 nt) | REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 4554508 | NA (NA) | 9 (0.120) | 6/164 | NT | NA | noncoding (4/34 nt) | REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 4554538 | NA (NA) | noncoding (34/34 nt) | REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 4587878 | NA (NA) | 8 (0.110) | 5/162 | NT | NA | noncoding (7/27 nt) | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 4587891 | NA (NA) | noncoding (20/27 nt) | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | 4606558 = | NA (NA) | 5 (0.070) | 5/164 | NT | NA | noncoding (1/92 nt) | REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 4606590 = | NA (NA) | noncoding (33/92 nt) | REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||