Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F169 I0 R1
|
76 |
156.9 |
7610945 |
95.9% |
7298896 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,807,026 |
A→G |
100% |
G14G (GGT→GGC) |
waaG ← |
UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,807,026 | 0 | A | G | 97.4%
| 511.2
/ 0.4
| 153 | G14G (GGT→GGC) | waaG | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base A (2/2); new base G (82/67); total (84/69) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 |
Only 100 of 155 total aligned reads displayed.
CGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAG > NC_000913/3806930‑3807122
|
cGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCACAGCGCATAAAGTCACCTTGAAGCccgcc > 2:3767349/1‑99 (MQ=255)
gggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCaa < 2:2773545/100‑1 (MQ=255)
ggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCCCGTTGAAGCCCGCCaa > 1:3190040/1‑99 (MQ=255)
ggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCaaa > 2:2016761/1‑100 (MQ=255)
cAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATg < 2:193993/100‑1 (MQ=255)
cAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATg < 1:1951881/100‑1 (MQ=255)
aTCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGa > 2:3334395/1‑100 (MQ=255)
tCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGaa < 2:2340198/100‑1 (MQ=255)
cGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGaaa < 1:3529647/100‑1 (MQ=255)
gCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGaaaa > 1:1030165/1‑100 (MQ=255)
ccTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAat > 1:3521217/1‑100 (MQ=255)
cTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAata > 2:1564271/1‑100 (MQ=255)
cTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAata > 2:1208890/1‑100 (MQ=255)
cccACGAGTGAGTATATTCTCGCGCATGGTGGCCCGGTGCGACAACCGTTGACGCAATGCGCATAAAGTCACGTTGAAGCCCGCCATATGGAatat < 1:97966/96‑1 (MQ=255)
cccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAttt < 1:1200623/100‑1 (MQ=255)
cccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAttt < 1:40661/100‑1 (MQ=255)
ccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTta < 1:1009183/100‑1 (MQ=255)
ccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTta > 1:3193336/1‑100 (MQ=255)
aCGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtata < 2:99413/100‑1 (MQ=255)
aCGACTGTGTATATACCCGAACATGGTGGCCCAGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtata < 1:2667284/100‑1 (MQ=255)
cTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATaaa > 1:507890/1‑100 (MQ=255)
cTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCAAGTTGAAGCCCGCCAAATGGAAAATATTTATATaa < 2:3615198/99‑1 (MQ=255)
gtgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACa > 2:529101/1‑100 (MQ=255)
gtAAATACCCGAACATGGTGGCCCCGTGCGGCAAATGTTGATGCAATGCGCATAAAGTCACGTTGAAGCACGCCAAATGGAAAATATCTATATAAACaaa > 1:363799/1‑100 (MQ=255)
atataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAAc > 2:2905831/1‑100 (MQ=255)
atataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAAc > 2:1178366/1‑100 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg > 2:3775783/1‑100 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg > 2:511883/1‑100 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg > 2:1546126/1‑100 (MQ=255)
ataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGc < 2:689488/100‑1 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc > 2:2793019/1‑100 (MQ=255)
aCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCa > 2:2705446/1‑100 (MQ=255)
aCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGACCGCCAAATGGCAAATATTTATATAAACaaaa > 1:1770632/1‑95 (MQ=255)
aCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAACCCGCCAAATGGAAAATATTTATATAAACAAAACGCCa > 1:2061049/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 2:3369205/1‑100 (MQ=255)
ccGAATATGGTGGCCCCGTGCGGTAACTGTTGATGCAATGCGCATAAAGTCACGGTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc < 1:2831745/99‑1 (MQ=255)
ccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACg < 1:510927/100‑1 (MQ=255)
ccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACg < 1:3088769/100‑1 (MQ=255)
cGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATCAACAAAACGCCACg > 1:3765540/1‑99 (MQ=255)
cGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCAGACAAATGGAATATCTTTATATAAACAAAACGcc > 1:3765526/1‑96 (MQ=255)
gAACATGGTTGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGAt < 1:3345055/100‑1 (MQ=255)
gAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGAt < 2:3246916/100‑1 (MQ=255)
ggtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAt > 2:3438507/1‑100 (MQ=255)
ggtggCCCCGTGCGGCAACTGTTGATGCAATACGCATAAAGCCACGTTGACGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCa < 1:966351/96‑1 (MQ=255)
gtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAtt > 2:3004856/1‑100 (MQ=255)
tggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtg > 2:496136/1‑100 (MQ=255)
tggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtg < 2:1888630/100‑1 (MQ=255)
tggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtg < 2:1888464/100‑1 (MQ=255)
ggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgt > 1:940805/1‑100 (MQ=255)
gCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAGACGCCACGATCATAATtgtg < 1:1863306/100‑1 (MQ=255)
gCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgtg > 1:339729/1‑100 (MQ=255)
ccccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGc < 2:3132658/100‑1 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa < 1:1238280/100‑1 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa > 2:1112144/1‑100 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa > 2:629292/1‑100 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa > 1:2879402/1‑100 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa > 1:2264634/1‑100 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa < 1:1236918/100‑1 (MQ=255)
ccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa > 1:2792449/1‑99 (MQ=255)
ttcGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACTCCACGATCATAATTGTGCATTcc < 1:2183265/98‑1 (MQ=255)
tGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTcc < 1:302241/100‑1 (MQ=255)
tGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTcc < 2:1919392/100‑1 (MQ=255)
cGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTg < 2:3357346/100‑1 (MQ=255)
gCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTc < 2:218835/100‑1 (MQ=255)
aattGTTGATGCAATGTGCATAAAGTCACGTTGAAGCCCGCCTAATGGAAAATATTTATATAAACAAGACGCCACGAGCATAATTGTGCATTCCTGTCa < 1:3367602/96‑1 (MQ=255)
cTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAACACGCCACGATCATAATTGTGCATTCCTGTCAGCt < 1:1330084/100‑1 (MQ=255)
cTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTCATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCt > 1:3615688/1‑100 (MQ=255)
tGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTg > 2:1834380/1‑100 (MQ=255)
tGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTg > 1:2995173/1‑100 (MQ=255)
tGATGCAATGCGCATCAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCAACGATCATACTTGTGCATTGCTGTGAGCTGAAg > 1:2258367/1‑100 (MQ=255)
tGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGa > 1:2882795/1‑98 (MQ=255)
aTGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAggg < 2:3334211/100‑1 (MQ=255)
tGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGaa > 1:1351650/1‑96 (MQ=255)
tGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgggg > 1:3663470/1‑100 (MQ=255)
cAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCa < 1:392435/100‑1 (MQ=255)
aaTGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAt < 1:2660388/100‑1 (MQ=255)
gcgcATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtctt > 1:1170791/1‑100 (MQ=255)
cgcATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtcttc > 2:484322/1‑100 (MQ=255)
cATAAAGTCACGCTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTg > 2:2499686/1‑100 (MQ=255)
aTAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTgg < 2:3039313/100‑1 (MQ=255)
aTAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTgg < 1:1546120/100‑1 (MQ=255)
aTAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTgg < 2:267213/100‑1 (MQ=255)
tAAAGTTACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGTCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCTTCTTCTgg < 1:2040458/99‑1 (MQ=255)
tAAAGTCACGTTGATGCCCGTCAAATGCAAGATATTTATCTAAACAAAACGCCACGATGCTAATCGTGCATTCCTGCCAGCTGAAGTGACATCGTCTGGc > 1:815469/1‑100 (MQ=255)
tAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGc < 2:1093589/100‑1 (MQ=255)
aaaGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa < 1:3357290/100‑1 (MQ=255)
aaaGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAACTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa < 1:2026396/100‑1 (MQ=255)
aaGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCaa > 2:1813524/1‑100 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa > 2:3421444/1‑100 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAATAGc > 1:1702965/1‑100 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGc < 1:2182990/100‑1 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGc > 2:2421408/1‑100 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGc > 2:2259830/1‑100 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTGAGATGAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGc > 1:1647724/1‑100 (MQ=255)
cGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCtt > 1:1931728/1‑100 (MQ=255)
cGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCtt > 2:1958869/1‑100 (MQ=255)
ttGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTACATTCCTGTCAGCTGAAGGGGCATCTTATGGCCACAGCttt > 1:1494667/1‑99 (MQ=255)
gAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTcc > 1:1683435/1‑100 (MQ=255)
aaGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCg < 1:640826/100‑1 (MQ=255)
aGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGt > 2:1249884/1‑100 (MQ=255)
|
CGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAG > NC_000913/3806930‑3807122
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
