Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F169 I1 R1
|
59 |
169.8 |
8365175 |
96.8% |
8097489 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,807,026 |
A→G |
G14G (GGT→GGC) |
waaG ← |
UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,807,026 | 0 | A | G | 98.9%
| 632.3
/ ‑3.5
| 177 | G14G (GGT→GGC) | waaG | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (81/94); total (83/94) |
| Fisher's exact test for biased strand distribution p-value = 2.18e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01 |
Only 100 of 181 total aligned reads displayed.
TCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGC > NC_000913/3806929‑3807123
|
tCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCccgcc < 2:1441570/100‑1 (MQ=255)
tCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTCTTGATGCAATGCGCATAAAGTCACGTTGAAGCccgcc < 2:2232536/100‑1 (MQ=255)
cGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCccgcca > 2:3350737/1‑100 (MQ=255)
gggCAATCGCCTTCCCACGACTGTGTATATACCCGCACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATCCGCATAACGTCACGTTTAAGCCCGCCaa > 1:1864046/1‑100 (MQ=255)
ggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCaaa > 1:21085/1‑100 (MQ=255)
gCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAAt > 2:3394032/1‑100 (MQ=255)
cAATCGCCTTCCCACGACTGTGTATATACCCGAACATTGTGGCACCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATg < 2:2526854/100‑1 (MQ=255)
cAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATg < 2:2793059/100‑1 (MQ=255)
tCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGaa < 2:3686470/100‑1 (MQ=255)
cGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGaaa < 1:3773860/100‑1 (MQ=255)
cACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtat > 2:2945750/1‑100 (MQ=255)
aCGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtata > 1:3525477/1‑100 (MQ=255)
cGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtatat > 2:2162591/1‑100 (MQ=255)
cGACTGTATATATACCCGAACATGGTGACCCCGTGCGGCAACTGTTGATGCAATGCGCATATAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtatat < 2:3427946/100‑1 (MQ=255)
aCTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATaa > 2:2064036/1‑100 (MQ=255)
aCTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATaa < 1:3044768/100‑1 (MQ=255)
tgtgTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAAc > 1:314999/1‑100 (MQ=255)
tgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACaa > 1:2654409/1‑100 (MQ=255)
tgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAGTTATATAAACaa > 1:778479/1‑100 (MQ=255)
atataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATACAATGCTCATAAATTCACGTTGAAGCCAGCCAAATGGAAAATATTTATATAAACAAAAc < 2:392746/100‑1 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg > 2:3083261/1‑100 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg < 1:313799/100‑1 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg > 2:1528192/1‑100 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc > 1:3185365/1‑100 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc > 1:3811874/1‑100 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc < 1:3419454/100‑1 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc < 2:1230506/100‑1 (MQ=255)
aCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATTTAAACAAAACGCCa > 2:978332/1‑100 (MQ=255)
aCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCACATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCa > 1:3277659/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 1:1081471/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 2:26279/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 2:3686808/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 1:1898450/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTCGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc < 2:2815274/100‑1 (MQ=255)
ccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACg < 2:3525439/100‑1 (MQ=255)
cGAACATGGTTGCCCCGTGCGGCAACTGTTGATTCAATGCGAATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGa < 2:670671/100‑1 (MQ=255)
aaCATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATc < 2:1218140/100‑1 (MQ=255)
aCATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCagtcatt > 2:2481847/1‑94 (MQ=255)
aCATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCa < 2:1424631/100‑1 (MQ=255)
ggtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAt > 2:2638876/1‑100 (MQ=255)
gtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAtt < 1:2446234/100‑1 (MQ=255)
tggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtg < 1:679324/100‑1 (MQ=255)
tggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtg < 1:718251/100‑1 (MQ=255)
gCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgtg < 2:1383907/100‑1 (MQ=255)
gCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgtg < 2:1590917/100‑1 (MQ=255)
gCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgtg > 1:2085227/1‑100 (MQ=255)
gCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgtg > 1:3641419/1‑100 (MQ=255)
gCCCCGTGCGGCAACTGCTGATGCAATGCACATAAAGACACGTTTAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACACCACAATCATAATtg < 2:1307081/98‑1 (MQ=255)
ccccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGc < 2:4039930/100‑1 (MQ=255)
ccccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGc < 2:1930075/100‑1 (MQ=255)
ccccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGc < 1:123960/100‑1 (MQ=255)
gTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTc > 2:3044944/1‑100 (MQ=255)
tGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTcc < 1:1943477/100‑1 (MQ=255)
tGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTcc < 1:3551514/100‑1 (MQ=255)
gCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCt > 1:1993571/1‑100 (MQ=255)
cGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTg > 2:3578237/1‑100 (MQ=255)
ggCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGt > 2:1261374/1‑100 (MQ=255)
ggCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGt > 2:1078682/1‑100 (MQ=255)
gCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTc < 2:2412466/100‑1 (MQ=255)
cAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAACCGCCACGATCATAATTGTGCATTCCTGTc < 2:3247979/99‑1 (MQ=255)
cAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCa > 1:1366489/1‑100 (MQ=255)
aaCTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTc < 2:2683752/98‑1 (MQ=255)
aCTGTTGATGCAATGCGGATAAAGTCACTTTGAAGCCCGCCAAATTGAAAAGATTTAGATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 2:809514/100‑1 (MQ=255)
aCTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 1:512535/100‑1 (MQ=255)
aCTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 1:546883/100‑1 (MQ=255)
aCTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 2:3874203/100‑1 (MQ=255)
gTTGATGAAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAACCGCCACGATCATAATTGTGCATTCCTGTCAGCTGa < 2:3139667/100‑1 (MQ=255)
tGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCTGCTGAAg < 1:2199633/100‑1 (MQ=255)
tGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAg < 1:3525282/100‑1 (MQ=255)
tGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAg > 1:1798419/1‑100 (MQ=255)
taggCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgg < 1:3265308/97‑1 (MQ=255)
aTGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAggg < 2:314994/100‑1 (MQ=255)
tGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgggg < 2:186363/100‑1 (MQ=255)
cAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATCGTGCATTCCTGTCAGCTGAAGGGGCa > 2:1993655/1‑100 (MQ=255)
aTGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtc < 1:2162611/100‑1 (MQ=255)
tGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTATGCATTCCTGTCAGCTGAAGGGGCAtct > 2:176613/1‑100 (MQ=255)
gcgcATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtatt > 1:2463728/1‑100 (MQ=255)
cgcATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtcttc > 2:4177972/1‑100 (MQ=255)
caaaaaGTCACATTAAAGCCCGCCAAATAGACAATATTTATATAAACCAAACGCCACGATCATAATTTTGCATACCTCTCAGCTAAAGGGGCAtcttct < 2:3630563/96‑1 (MQ=255)
cATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTg > 2:1839157/1‑100 (MQ=255)
tAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGc < 1:3241518/100‑1 (MQ=255)
tAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGc < 1:2990233/100‑1 (MQ=255)
aaaGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa < 1:1319146/100‑1 (MQ=255)
aaaGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa < 2:1371563/100‑1 (MQ=255)
aGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAAc < 2:2023790/100‑1 (MQ=255)
gacACGTTGAAGCACGCCAAATGGAAAATATGTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa > 1:2815705/3‑100 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATGTAAACAAACCGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAAc < 1:1474823/99‑1 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa > 1:306453/1‑100 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa < 1:3847656/100‑1 (MQ=255)
gTCAAGTTGAAGCCCGCAAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa > 2:3061540/1‑100 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGc < 2:3811832/100‑1 (MQ=255)
ttGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCtttt > 2:2540816/1‑100 (MQ=255)
tGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTc < 1:2540843/100‑1 (MQ=255)
tGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTc < 1:4103031/100‑1 (MQ=255)
gAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCttt > 2:297792/1‑97 (MQ=255)
aaGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCg < 2:2358094/100‑1 (MQ=255)
aGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGt < 1:3394070/100‑1 (MQ=255)
gCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTa > 1:4013151/1‑100 (MQ=255)
cccACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAg > 2:704411/1‑100 (MQ=255)
ccaccaAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAgc > 1:228578/1‑100 (MQ=255)
|
TCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGC > NC_000913/3806929‑3807123
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
