Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,807,026 |
A→G |
100% |
G14G (GGT→GGC) |
waaG ← |
UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,807,026 | 0 | A | G | 97.7%
| 590.7
/ ‑0.9
| 178 | G14G (GGT→GGC) | waaG | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base A (2/3); new base G (113/60); total (115/63) |
| Fisher's exact test for biased strand distribution p-value = 3.48e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 181 total aligned reads displayed.
TCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGG > NC_000913/3806929‑3807125
|
tCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCccgcc > 1:1562724/1‑100 (MQ=255)
ggCAATCGCCTTCCCACGACTTTGTATATACCCGAACATGGTGGCCCCGTGCTGCAACTGTTGATGCAATGCACATAAAGACACGTTGAAGCCCGCCaaa > 1:3735900/1‑100 (MQ=255)
ggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTTCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTTAAGCCCGCCaaa > 1:3750789/1‑100 (MQ=255)
ggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCaaa > 2:2979073/1‑100 (MQ=255)
ggCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCaaa > 2:3645066/1‑100 (MQ=255)
gaaaaTCGCCTTCCCACAACTGTAAATATACCCGAAAATAATAGCCTAGAACAACAACTGTTGATGCAATAAGCAAAAAGTCAAGTTGAAAACCACTaaa > 2:2161875/4‑100 (MQ=255)
tccgatctcTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAAt < 1:2904969/92‑1 (MQ=255)
gCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAAt > 1:3358671/1‑100 (MQ=255)
cAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAAt < 1:2141514/99‑1 (MQ=255)
cAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATg > 1:2818407/1‑100 (MQ=255)
aaTCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGTCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATgg < 1:2489615/100‑1 (MQ=255)
aaTCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATgg > 2:1277365/1‑100 (MQ=255)
gCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATACGCAAAAAGTCACGTTGAAGCCCGCCAAATGGaaaa > 1:3219407/1‑100 (MQ=255)
ccTTCCCACGACTGTGTATATAACCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAat < 1:2084138/100‑1 (MQ=255)
cTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAAtagatcgga > 2:2904943/1‑92 (MQ=255)
ttCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAatat > 2:1153901/1‑100 (MQ=255)
cccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAttt > 1:2906594/1‑100 (MQ=255)
cccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAttt > 2:1626326/1‑100 (MQ=255)
cccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAttt > 2:759541/1‑100 (MQ=255)
cccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATAttt > 1:1337631/1‑100 (MQ=255)
ccACTACTGTGTATATACCCGAACATGGTGGCCCCTTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTta < 1:319584/100‑1 (MQ=255)
ccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTta < 1:1802789/100‑1 (MQ=255)
ccACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTta < 1:3898267/100‑1 (MQ=255)
cACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGTCAACTGTTGATACAATGCGCATAAAATCACGTTGAAGCCCGCCAAATGGAAAATAttaa > 1:1152618/1‑97 (MQ=255)
aCGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTtata < 2:1981033/100‑1 (MQ=255)
tgtgTATGTACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCTCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAAc < 2:469430/100‑1 (MQ=255)
tgtgTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTTATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAAc < 2:599506/100‑1 (MQ=255)
gtgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACa > 1:2267966/1‑100 (MQ=255)
gtgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCACGCCAAATGGAAAATATTTATATAAACa > 1:657302/1‑100 (MQ=255)
tgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACaa > 1:3604235/1‑100 (MQ=255)
tgtATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACaa > 2:1927593/1‑100 (MQ=255)
tttataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACaaaa > 1:2651702/3‑100 (MQ=255)
tatataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACaaaa > 1:2203732/1‑100 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACaaaa > 1:255790/1‑98 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAAc > 1:275556/1‑99 (MQ=255)
tataCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACg > 1:1715069/1‑100 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc > 1:711560/1‑100 (MQ=255)
taCCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGcc > 1:1088434/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 1:3475774/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 1:565001/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 2:2867609/1‑100 (MQ=255)
cccGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAc > 2:3179198/1‑100 (MQ=255)
cGAACATGGTGTCTCCGTGCGGCAACTGTTTTTGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACg < 1:577307/99‑1 (MQ=255)
gAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGa > 1:1834817/1‑99 (MQ=255)
aaCATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATc < 2:2216791/100‑1 (MQ=255)
aCATGGTGGCAACGTGCGGCAAATGTTGATGCAATGCGCATAAAGTCTCGTTGAAGCCCGCCAAAGGGAAACTATTTATATAAACAAAACGCCAc > 2:740331/1‑95 (MQ=255)
tggtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATaa > 1:2671999/1‑100 (MQ=255)
tggtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAACCCCGCCAAATGGAAAAAATATATATAAACAAAACGCCACAATCaaaa > 1:1580789/1‑100 (MQ=255)
ggtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAt < 1:3791544/100‑1 (MQ=255)
ggtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAt < 2:350307/100‑1 (MQ=255)
gtggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAAtt < 1:889207/100‑1 (MQ=255)
ggcccagatGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtg < 2:203851/92‑1 (MQ=255)
ggCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATtgt < 2:3297348/100‑1 (MQ=255)
ccccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGc > 2:2942861/1‑100 (MQ=255)
cccGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCa < 2:2465363/100‑1 (MQ=255)
aacGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCAACGATAATAAttataca > 2:227652/3‑91 (MQ=255)
cGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTg > 2:3352705/1‑100 (MQ=255)
ggCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTg < 2:1332975/99‑1 (MQ=255)
ggCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGt > 1:2134795/1‑100 (MQ=255)
gCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTc < 2:3810345/100‑1 (MQ=255)
cAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCa < 1:3514316/100‑1 (MQ=255)
cAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCAAGATCATAATTGTACAttaatatca > 1:2417872/1‑93 (MQ=255)
cAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTCATATAAACAACACGCCACGATCATAATTATGCATTCCTGtta < 1:2643665/100‑3 (MQ=255)
aCTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 1:402664/100‑1 (MQ=255)
aCTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 1:2591182/100‑1 (MQ=255)
gatctGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCt < 1:61556/96‑1 (MQ=255)
cTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCt > 2:1599379/1‑100 (MQ=255)
tGTTGATGCAATGCGCATAAAGTCACGTTGAAGCACGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGc < 2:2671975/98‑1 (MQ=255)
tGTTGATGCAATGCGCATAAAGTAACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATAATAATTGTGCATTCCTGTCAGCTg > 2:2632048/1‑100 (MQ=255)
gTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGa > 1:2222554/1‑100 (MQ=255)
ttGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGaa < 1:81744/100‑1 (MQ=255)
gATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCtagatc > 2:61553/1‑95 (MQ=255)
gATGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgg > 2:1763812/1‑100 (MQ=255)
gATGCAATGCGCATAAAGTCACGTTGAAGACCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgg < 2:849848/100‑1 (MQ=255)
aTGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAggg > 1:2929746/1‑100 (MQ=255)
aTGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAggg < 2:1000221/100‑1 (MQ=255)
tGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgggg > 1:149798/1‑100 (MQ=255)
tGCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAgggg > 1:1973052/1‑100 (MQ=255)
gCAATGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGc > 2:3911380/1‑100 (MQ=255)
aaTGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAt > 1:2201804/1‑100 (MQ=255)
aTGCGCATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtc > 2:414617/1‑100 (MQ=255)
gcATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCAtcttct > 1:1063310/1‑100 (MQ=255)
cATAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTg < 2:1333349/100‑1 (MQ=255)
aTAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTAAGCTGAAGGGGCATCTTCTgg > 1:521323/1‑100 (MQ=255)
tAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGc > 1:2449070/1‑100 (MQ=255)
tAAAGTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGACATCTTCTGGc > 2:1464644/1‑100 (MQ=255)
aaaGTCACGTTGAAGCCTGCAAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCa < 2:2534046/100‑1 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa > 1:2584735/1‑100 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa > 2:2355610/1‑100 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAACTGAAGGGGAATCTTCTGGCAACa > 2:2777109/1‑100 (MQ=255)
gTCACGTTGAAGCCCGCCAAATGAAAAACATTTATATAAACAAACCCCCACGATCATAATTGTGCTTTCCTGTCATCTGAAGGTGCATCTTCTGGCAAc < 2:2702771/99‑1 (MQ=255)
gTCACGTTGAAGCCCGCCAAATAGAAAATATTTATACAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACa < 2:3642648/100‑1 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAg > 2:1921868/1‑99 (MQ=255)
cACGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGc < 1:2026288/100‑1 (MQ=255)
cGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGCTCATAATTGTGCATTCCTGTCAGATGAAGGGGCATCTTCTGGCAACAGCtt > 1:229992/1‑100 (MQ=255)
cGTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAAAGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCtt > 2:2998834/1‑100 (MQ=255)
gTTGAAGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCttt > 2:547347/1‑100 (MQ=255)
aaGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCg < 2:2094557/100‑1 (MQ=255)
aaGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCg < 2:653351/100‑1 (MQ=255)
aaGCCCGCCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCg > 1:2968783/1‑100 (MQ=255)
|
TCGGGCAATCGCCTTCCCACGACTGTGTATATACCCGAACATGGTGGCCCCGTGCGGCAACTGTTGATGCAATGCGCATAAAGTCACGTTGAAGCCCACCAAATGGAAAATATTTATATAAACAAAACGCCACGATCATAATTGTGCATTCCTGTCAGCTGAAGGGGCATCTTCTGGCAACAGCTTTTCCGTAGCGG > NC_000913/3806929‑3807125
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
