Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F191 I1 R1
|
67 |
105.9 |
5535243 |
92.7% |
5131170 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,432,376 |
(G)5→4 |
coding (681/966 nt) |
ytfF ← |
DMT transporter family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,432,372 | 0 | G | . | 99.1%
| 516.4
/ ‑2.0
| 111 | coding (685/966 nt) | ytfF | DMT transporter family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base . (50/60); total (51/60) |
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 |
Only 100 of 118 total aligned reads displayed.
GTCGGTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACGGGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGACCAGCG > NC_000913/4432275‑4432467
|
gTCGGTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACggg > 2:861656/1‑100 (MQ=255)
gTCGGTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACggg < 2:1338837/100‑1 (MQ=255)
gTCGGTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACggg > 1:2230784/1‑100 (MQ=255)
tCGGTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACgggg < 2:1709255/100‑1 (MQ=255)
ggTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACggggcc > 1:1806101/1‑98 (MQ=255)
aTAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAg > 1:2668877/1‑100 (MQ=255)
aTAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGAGCCAAAg < 2:663333/100‑1 (MQ=255)
aTAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGAAACCATCAGACTAATAAACACCAGCGGACggggccaa > 1:1773218/1‑94 (MQ=255)
tAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAgg < 2:1740435/100‑1 (MQ=255)
tAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAgg < 2:163329/100‑1 (MQ=255)
tAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAgg > 2:729826/1‑100 (MQ=255)
aGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAGCCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAggg > 2:1802229/1‑100 (MQ=255)
aGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAggg < 1:774736/100‑1 (MQ=255)
aGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAggg < 1:773423/100‑1 (MQ=255)
aGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAggg < 2:1358012/100‑1 (MQ=255)
gctggctgGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGt < 2:2371062/100‑1 (MQ=255)
ctggctggCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTa < 1:2587208/100‑1 (MQ=255)
ggctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAgg > 2:2534013/1‑100 (MQ=255)
ggctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAgg < 1:729831/100‑1 (MQ=255)
ggctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAgg > 1:797009/1‑100 (MQ=255)
ggctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAgg > 1:306099/1‑100 (MQ=255)
ggctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAgg > 1:2239618/1‑100 (MQ=255)
gctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAggg < 1:213406/100‑1 (MQ=255)
ctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGga > 1:794693/1‑100 (MQ=255)
ctggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGga < 1:436878/100‑1 (MQ=255)
tggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGgag > 1:2334910/1‑100 (MQ=255)
ggcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGgaga < 1:2568746/100‑1 (MQ=255)
gcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGaa < 1:1905922/100‑1 (MQ=255)
gcGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGaa > 2:264724/1‑100 (MQ=255)
cGACGTTCCAGCAGAGTGCGCCGACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGgagn < 2:2155914/98‑2 (MQ=255)
cGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGgaga < 1:900482/98‑1 (MQ=255)
cGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAg < 2:842052/100‑1 (MQ=255)
gACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCGATCGCAACCATCAGACTAATAAACACCACGGGAC‑GGGGCCAAAAGGTAGGGAGAAg < 1:268589/99‑1 (MQ=255)
gACGTGCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGt < 2:665709/100‑1 (MQ=255)
cGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTcc > 1:44923/1‑100 (MQ=255)
gTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGTGCCAAAGGGTAGGGAGAAGTCCg > 1:1484155/1‑100 (MQ=255)
ttCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCgg < 1:1168016/100‑1 (MQ=255)
ttCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCgg < 2:1773204/100‑1 (MQ=255)
ttCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCgg < 1:2534032/100‑1 (MQ=255)
tCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGTCAAAGGGTAGGGAGAAGTCCgg < 1:2481814/99‑1 (MQ=255)
tCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGc > 2:2699771/1‑100 (MQ=255)
cagcagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAGCCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGt < 1:1802243/100‑1 (MQ=255)
agcagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGtt > 2:1020706/1‑100 (MQ=255)
agcagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGtt > 2:708240/1‑100 (MQ=255)
gcagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGttt < 2:158885/100‑1 (MQ=255)
gcagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGttt > 2:2692314/1‑100 (MQ=255)
gcagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGttt > 1:695224/1‑100 (MQ=255)
cagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTg < 2:190550/100‑1 (MQ=255)
cagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTg < 2:2411940/100‑1 (MQ=255)
cagAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTg < 1:2692334/100‑1 (MQ=255)
gagTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCg < 2:273503/100‑1 (MQ=255)
gagTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCg < 1:1349764/100‑1 (MQ=255)
gagTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCg < 1:2527860/100‑1 (MQ=255)
cgcCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTc > 2:1775313/1‑100 (MQ=255)
cgcCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGAGCCAAGGGGTAGGGAGAAGTCCGGCGTTTGCGTATTc > 2:1858276/1‑100 (MQ=255)
aaCCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGcc < 2:764862/100‑1 (MQ=255)
ccATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGt > 1:1164306/1‑100 (MQ=255)
cATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTa > 2:1214459/1‑100 (MQ=255)
cATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTa > 2:2006614/1‑100 (MQ=255)
cATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTa < 1:1654323/100‑1 (MQ=255)
cATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTa > 1:378280/1‑100 (MQ=255)
cATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTa > 2:1725339/1‑100 (MQ=255)
tGAGCAAAGCACGGCTATCGCAACCATCAGACTGATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAAc > 1:1908152/1‑100 (MQ=255)
aGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACaa < 1:1775327/100‑1 (MQ=255)
aGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACaa < 2:1040770/100‑1 (MQ=255)
gCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAg > 2:683737/1‑100 (MQ=255)
cAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCACAGGGGAGGGAGAAGTCCGGCGTGTGCGTATTCAGCCAGTAAc > 2:1171923/1‑96 (MQ=255)
cAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGc < 1:1687197/100‑1 (MQ=255)
cAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGc > 1:2424462/1‑100 (MQ=255)
aaaGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGcg > 1:469567/1‑100 (MQ=255)
gCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGTGCCAAAGGGTAGGGAGACGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGcgacg < 2:1484144/100‑1 (MQ=255)
cACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGcgacga < 2:736543/100‑1 (MQ=255)
tctgCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACgag < 1:1784291/97‑1 (MQ=255)
aCGGCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACgag < 2:44922/100‑1 (MQ=255)
gCTATCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACgagaga > 2:1784277/1‑98 (MQ=255)
aTCGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGcc < 2:1633419/100‑1 (MQ=255)
cGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGa > 2:322955/1‑100 (MQ=255)
cGCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGa > 1:2300202/1‑100 (MQ=255)
gCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGAt > 1:74303/1‑100 (MQ=255)
gCAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGAt < 2:223974/100‑1 (MQ=255)
cAACCATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATa > 1:1103731/1‑100 (MQ=255)
cATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTg < 1:1020713/100‑1 (MQ=255)
cATCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTg < 1:2699791/100‑1 (MQ=255)
aTCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGa > 2:2091099/1‑100 (MQ=255)
aTCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGa > 2:705298/1‑100 (MQ=255)
tCAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGaa < 2:2181214/100‑1 (MQ=255)
cAGACTAATAAACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGaaa > 2:2483028/1‑100 (MQ=255)
ataaACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAg > 2:1292205/1‑100 (MQ=255)
ataaACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAg < 1:618370/100‑1 (MQ=255)
taaACACCAGCGGACGGGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCa > 2:844440/1‑99 (MQ=255)
taaACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAgt > 2:415612/1‑100 (MQ=255)
taaACACCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAgt > 2:78432/1‑100 (MQ=255)
cacCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGa > 2:2230332/1‑100 (MQ=255)
cacCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGa > 2:1174241/1‑100 (MQ=255)
cacCAGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGa > 1:1559853/1‑100 (MQ=255)
aGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGACCAg > 1:1129144/1‑100 (MQ=255)
aGCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGACCAg < 2:797003/100‑1 (MQ=255)
gCGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGACCAgc < 1:1068690/100‑1 (MQ=255)
cGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAgtgtagatcgga > 1:1736262/1‑92 (MQ=255)
cGGAC‑GGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGACCAgcg < 2:2334892/100‑1 (MQ=255)
|
GTCGGTAATAGCTGGCTGGCGACGTTCCAGCAGAGTGCGCCAACCCATGAGCAAAGCACGGCTATCGCAACCATCAGACTAATAAACACCAGCGGACGGGGGCCAAAGGGTAGGGAGAAGTCCGGCGTTTGCGTATTCAGCCAGTAACAAGCGACGAGATAGCCGATAAGTGAAACCGGCAGTGTGACCAGCG > NC_000913/4432275‑4432467
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
